Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Rps28P62858 Gm42471-201ENSMUST00000201457 1865 ntBASIC9.47□□□□□ -0.89
Rps28P62858 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rps28P62858 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rps28P62858 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rps28P62858 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rps28P62858 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rps28P62858 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Rps28P62858 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rps28P62858 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rps28P62858 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Rps28P62858 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Rps28P62858 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Rps28P62858 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rps28P62858 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Rps28P62858 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rps28P62858 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.46□□□□□ -0.9
Rps28P62858 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
Rps28P62858 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Gm18244-201ENSMUST00000219747 1566 ntBASIC9.46□□□□□ -0.9
Rps28P62858 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rps28P62858 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Rps28P62858 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC9.45□□□□□ -0.9
Rps28P62858 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Rps28P62858 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Rps28P62858 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Rps28P62858 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rps28P62858 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Rps28P62858 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Rps28P62858 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Rps28P62858 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Rps28P62858 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Rps28P62858 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC9.44□□□□□ -0.9
Rps28P62858 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms