Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab4aP56371 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rab4aP56371 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab4aP56371 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab4aP56371 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab4aP56371 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab4aP56371 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.62□□□□□ -0.39
Rab4aP56371 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab4aP56371 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab4aP56371 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab4aP56371 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab4aP56371 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab4aP56371 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab4aP56371 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rab4aP56371 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.61□□□□□ -0.39
Rab4aP56371 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.61□□□□□ -0.39
Rab4aP56371 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.61□□□□□ -0.39
Rab4aP56371 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.61□□□□□ -0.39
Rab4aP56371 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Rab4aP56371 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rab4aP56371 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.6□□□□□ -0.39
Rab4aP56371 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.6□□□□□ -0.39
Rab4aP56371 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.6□□□□□ -0.39
Rab4aP56371 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Gm13234-201ENSMUST00000120010 747 ntBASIC12.6□□□□□ -0.39
Rab4aP56371 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Rab4aP56371 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.6□□□□□ -0.39
Rab4aP56371 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.6□□□□□ -0.39
Rab4aP56371 Gm27454-201ENSMUST00000185090 204 ntBASIC12.6□□□□□ -0.39
Rab4aP56371 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.6□□□□□ -0.39
Rab4aP56371 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rab4aP56371 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.6□□□□□ -0.39
Rab4aP56371 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.6□□□□□ -0.39
Rab4aP56371 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Rab4aP56371 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab4aP56371 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab4aP56371 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.59□□□□□ -0.39
Rab4aP56371 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab4aP56371 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab4aP56371 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab4aP56371 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.59□□□□□ -0.39
Rab4aP56371 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab4aP56371 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rab4aP56371 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab4aP56371 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rab4aP56371 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab4aP56371 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab4aP56371 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab4aP56371 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab4aP56371 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab4aP56371 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rab4aP56371 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rab4aP56371 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab4aP56371 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms