Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ddx6P54823 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.15■□□□□ 0.18
Ddx6P54823 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ddx6P54823 Gm18489-201ENSMUST00000172565 551 ntBASIC16.15■□□□□ 0.18
Ddx6P54823 Gm24513-201ENSMUST00000174964 138 ntBASIC16.15■□□□□ 0.18
Ddx6P54823 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.15■□□□□ 0.18
Ddx6P54823 Gm45167-201ENSMUST00000208007 322 ntBASIC16.15■□□□□ 0.18
Ddx6P54823 Gm7787-201ENSMUST00000216858 688 ntBASIC16.15■□□□□ 0.18
Ddx6P54823 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ddx6P54823 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ddx6P54823 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Ddx6P54823 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ddx6P54823 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ddx6P54823 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Ddx6P54823 Mir3113-201ENSMUST00000175478 76 ntBASIC16.14■□□□□ 0.17
Ddx6P54823 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ddx6P54823 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Gm27397-201ENSMUST00000184997 107 ntBASIC16.14■□□□□ 0.17
Ddx6P54823 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.14■□□□□ 0.17
Ddx6P54823 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.14■□□□□ 0.17
Ddx6P54823 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.14■□□□□ 0.17
Ddx6P54823 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ddx6P54823 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx6P54823 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ddx6P54823 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.13■□□□□ 0.17
Ddx6P54823 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ddx6P54823 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.13■□□□□ 0.17
Ddx6P54823 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.13■□□□□ 0.17
Ddx6P54823 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.13■□□□□ 0.17
Ddx6P54823 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.13■□□□□ 0.17
Ddx6P54823 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.13■□□□□ 0.17
Ddx6P54823 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.13■□□□□ 0.17
Ddx6P54823 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ddx6P54823 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ddx6P54823 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ddx6P54823 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx6P54823 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx6P54823 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx6P54823 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx6P54823 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx6P54823 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx6P54823 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx6P54823 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ddx6P54823 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx6P54823 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.12■□□□□ 0.17
Ddx6P54823 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.12■□□□□ 0.17
Ddx6P54823 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx6P54823 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx6P54823 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.12■□□□□ 0.17
Ddx6P54823 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.12■□□□□ 0.17
Ddx6P54823 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.12■□□□□ 0.17
Ddx6P54823 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.12■□□□□ 0.17
Ddx6P54823 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ddx6P54823 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx6P54823 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx6P54823 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx6P54823 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms