Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.18■□□□□ 0.18
Vps4bP46467 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.18■□□□□ 0.18
Vps4bP46467 Gm44430-201ENSMUST00000203376 995 ntBASIC16.18■□□□□ 0.18
Vps4bP46467 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Vps4bP46467 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.18■□□□□ 0.18
Vps4bP46467 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Vps4bP46467 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Vps4bP46467 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Prob1-201ENSMUST00000097619 3021 ntBASIC16.18■□□□□ 0.18
Vps4bP46467 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vps4bP46467 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Gm10013-201ENSMUST00000106074 672 ntBASIC16.17■□□□□ 0.18
Vps4bP46467 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 AA414768-201ENSMUST00000121924 1257 ntBASIC16.17■□□□□ 0.18
Vps4bP46467 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.17■□□□□ 0.18
Vps4bP46467 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.17■□□□□ 0.18
Vps4bP46467 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vps4bP46467 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.17■□□□□ 0.18
Vps4bP46467 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vps4bP46467 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4bP46467 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.16■□□□□ 0.18
Vps4bP46467 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Vps4bP46467 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vps4bP46467 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vps4bP46467 Gm14859-201ENSMUST00000117752 357 ntBASIC16.16■□□□□ 0.18
Vps4bP46467 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 Gm33142-201ENSMUST00000193913 867 ntBASIC16.16■□□□□ 0.18
Vps4bP46467 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps4bP46467 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Vps4bP46467 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Vps4bP46467 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.16■□□□□ 0.18
Vps4bP46467 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps4bP46467 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4bP46467 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Vps4bP46467 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Vps4bP46467 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms