Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm18421-201ENSMUST00000204122 625 ntBASIC15.29■□□□□ 0.04
BdnfP21237 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
BdnfP21237 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
BdnfP21237 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BdnfP21237 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
BdnfP21237 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
BdnfP21237 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BdnfP21237 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
BdnfP21237 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.28■□□□□ 0.04
BdnfP21237 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
BdnfP21237 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Gm15565-201ENSMUST00000118890 427 ntBASIC15.28■□□□□ 0.04
BdnfP21237 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.28■□□□□ 0.04
BdnfP21237 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.28■□□□□ 0.04
BdnfP21237 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Mir5130-201ENSMUST00000175160 84 ntBASIC15.28■□□□□ 0.04
BdnfP21237 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.28■□□□□ 0.04
BdnfP21237 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
BdnfP21237 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.28■□□□□ 0.04
BdnfP21237 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.28■□□□□ 0.04
BdnfP21237 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
BdnfP21237 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BdnfP21237 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
BdnfP21237 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
BdnfP21237 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
BdnfP21237 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BdnfP21237 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BdnfP21237 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BdnfP21237 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
BdnfP21237 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BdnfP21237 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.27■□□□□ 0.04
BdnfP21237 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BdnfP21237 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BdnfP21237 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BdnfP21237 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BdnfP21237 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BdnfP21237 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BdnfP21237 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BdnfP21237 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BdnfP21237 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BdnfP21237 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.27■□□□□ 0.03
BdnfP21237 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BdnfP21237 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
BdnfP21237 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BdnfP21237 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BdnfP21237 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BdnfP21237 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BdnfP21237 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
BdnfP21237 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BdnfP21237 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
BdnfP21237 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BdnfP21237 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.26■□□□□ 0.03
BdnfP21237 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.26■□□□□ 0.03
BdnfP21237 Gm10252-201ENSMUST00000209541 832 ntBASIC15.26■□□□□ 0.03
BdnfP21237 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BdnfP21237 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
BdnfP21237 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BdnfP21237 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BdnfP21237 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BdnfP21237 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
BdnfP21237 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BdnfP21237 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
BdnfP21237 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.25■□□□□ 0.03
BdnfP21237 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms