Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hoxa3P02831 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Hoxa3P02831 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Hoxa3P02831 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hoxa3P02831 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Hoxa3P02831 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Hoxa3P02831 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.34□□□□□ -0.27
Hoxa3P02831 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.34□□□□□ -0.27
Hoxa3P02831 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.34□□□□□ -0.27
Hoxa3P02831 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hoxa3P02831 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa3P02831 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hoxa3P02831 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Hoxa3P02831 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hoxa3P02831 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hoxa3P02831 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm44357-201ENSMUST00000195897 142 ntBASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm19658-201ENSMUST00000196231 138 ntBASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm44367-201ENSMUST00000196836 138 ntBASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm44350-201ENSMUST00000197197 138 ntBASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm44390-201ENSMUST00000197533 144 ntBASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm44313-201ENSMUST00000198018 138 ntBASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm44486-201ENSMUST00000198508 138 ntBASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm44314-201ENSMUST00000199263 138 ntBASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm44394-201ENSMUST00000199558 138 ntBASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm44484-201ENSMUST00000199873 138 ntBASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm44466-201ENSMUST00000200264 138 ntBASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm44359-201ENSMUST00000200671 138 ntBASIC13.33□□□□□ -0.28
Hoxa3P02831 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hoxa3P02831 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hoxa3P02831 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa3P02831 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hoxa3P02831 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.32□□□□□ -0.28
Hoxa3P02831 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Hoxa3P02831 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.32□□□□□ -0.28
Hoxa3P02831 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.32□□□□□ -0.28
Hoxa3P02831 Gm36967-201ENSMUST00000193814 266 ntBASIC13.32□□□□□ -0.28
Hoxa3P02831 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.32□□□□□ -0.28
Hoxa3P02831 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Hoxa3P02831 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hoxa3P02831 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Hoxa3P02831 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms