Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.44■□□□□ 0.7
Col4a1P02463 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Col4a1P02463 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Col4a1P02463 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a1P02463 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Col4a1P02463 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a1P02463 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a1P02463 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Col4a1P02463 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.44■□□□□ 0.7
Col4a1P02463 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.43■□□□□ 0.7
Col4a1P02463 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.43■□□□□ 0.7
Col4a1P02463 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.43■□□□□ 0.7
Col4a1P02463 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.43■□□□□ 0.7
Col4a1P02463 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Col4a1P02463 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.43■□□□□ 0.7
Col4a1P02463 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.43■□□□□ 0.7
Col4a1P02463 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col4a1P02463 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.43■□□□□ 0.7
Col4a1P02463 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Col4a1P02463 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a1P02463 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a1P02463 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a1P02463 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a1P02463 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a1P02463 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a1P02463 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.42■□□□□ 0.7
Col4a1P02463 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Col4a1P02463 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a1P02463 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a1P02463 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col4a1P02463 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Col4a1P02463 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a1P02463 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a1P02463 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a1P02463 Mir1895-201ENSMUST00000122615 79 ntBASIC19.41■□□□□ 0.7
Col4a1P02463 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a1P02463 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.41■□□□□ 0.7
Col4a1P02463 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a1P02463 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.41■□□□□ 0.7
Col4a1P02463 Mir6990-201ENSMUST00000183724 91 ntBASIC19.41■□□□□ 0.7
Col4a1P02463 Gm43474-201ENSMUST00000196415 774 ntBASIC19.41■□□□□ 0.7
Col4a1P02463 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.41■□□□□ 0.7
Col4a1P02463 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.41■□□□□ 0.7
Col4a1P02463 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.41■□□□□ 0.7
Col4a1P02463 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Col4a1P02463 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a1P02463 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a1P02463 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a1P02463 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.41■□□□□ 0.7
Col4a1P02463 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a1P02463 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a1P02463 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a1P02463 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Col4a1P02463 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Col4a1P02463 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.4■□□□□ 0.7
Col4a1P02463 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col4a1P02463 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Gm25948-201ENSMUST00000175334 112 ntBASIC19.4■□□□□ 0.7
Col4a1P02463 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.4■□□□□ 0.7
Col4a1P02463 Gm5312-201ENSMUST00000203728 547 ntBASIC19.4■□□□□ 0.7
Col4a1P02463 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Col4a1P02463 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.4■□□□□ 0.7
Col4a1P02463 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col4a1P02463 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.4■□□□□ 0.7
Col4a1P02463 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Col4a1P02463 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Col4a1P02463 Gm8318-201ENSMUST00000182954 872 ntBASIC19.4■□□□□ 0.7
Col4a1P02463 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.4■□□□□ 0.7
Col4a1P02463 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a1P02463 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms