Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hbb-b1P02088 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hbb-b1P02088 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hbb-b1P02088 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hbb-b1P02088 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hbb-b1P02088 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.29□□□□□ -0.6
Hbb-b1P02088 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.29□□□□□ -0.6
Hbb-b1P02088 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.29□□□□□ -0.6
Hbb-b1P02088 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hbb-b1P02088 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Gm10655-201ENSMUST00000098658 1397 ntBASIC11.28□□□□□ -0.6
Hbb-b1P02088 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Gm14117-201ENSMUST00000122417 843 ntBASIC11.28□□□□□ -0.6
Hbb-b1P02088 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.28□□□□□ -0.6
Hbb-b1P02088 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hbb-b1P02088 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hbb-b1P02088 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hbb-b1P02088 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hbb-b1P02088 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hbb-b1P02088 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hbb-b1P02088 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hbb-b1P02088 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Gm43173-201ENSMUST00000202246 593 ntBASIC11.27□□□□□ -0.61
Hbb-b1P02088 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hbb-b1P02088 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hbb-b1P02088 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.26□□□□□ -0.61
Hbb-b1P02088 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.26□□□□□ -0.61
Hbb-b1P02088 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hbb-b1P02088 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hbb-b1P02088 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hbb-b1P02088 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms