Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.06■□□□□ 0
Matn4O89029 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.06■□□□□ 0
Matn4O89029 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.06■□□□□ 0
Matn4O89029 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.06■□□□□ 0
Matn4O89029 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.06■□□□□ 0
Matn4O89029 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.06■□□□□ 0
Matn4O89029 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Matn4O89029 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Matn4O89029 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Matn4O89029 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Matn4O89029 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Matn4O89029 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.05■□□□□ -0
Matn4O89029 Gm13559-201ENSMUST00000120476 863 ntBASIC15.05■□□□□ -0
Matn4O89029 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.05■□□□□ -0
Matn4O89029 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.05■□□□□ -0
Matn4O89029 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.05■□□□□ -0
Matn4O89029 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.05■□□□□ -0
Matn4O89029 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Matn4O89029 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.05■□□□□ -0
Matn4O89029 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.05■□□□□ -0
Matn4O89029 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Matn4O89029 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Matn4O89029 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Matn4O89029 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Matn4O89029 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.04■□□□□ -0
Matn4O89029 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Matn4O89029 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.04■□□□□ -0
Matn4O89029 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.04■□□□□ -0
Matn4O89029 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.04■□□□□ -0
Matn4O89029 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
Matn4O89029 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.04■□□□□ -0
Matn4O89029 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.04■□□□□ -0
Matn4O89029 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.03■□□□□ -0
Matn4O89029 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Matn4O89029 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.03■□□□□ -0
Matn4O89029 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Matn4O89029 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.03■□□□□ -0
Matn4O89029 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Gm37055-201ENSMUST00000191866 133 ntBASIC15.03■□□□□ -0
Matn4O89029 Gm44430-201ENSMUST00000203376 995 ntBASIC15.03■□□□□ -0
Matn4O89029 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn4O89029 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms