Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Abcd4O89016 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Abcd4O89016 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.41□□□□□ -0.1
Abcd4O89016 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.41□□□□□ -0.1
Abcd4O89016 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Abcd4O89016 Gm11452-201ENSMUST00000122376 690 ntBASIC14.41□□□□□ -0.1
Abcd4O89016 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Abcd4O89016 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.41□□□□□ -0.1
Abcd4O89016 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.41□□□□□ -0.1
Abcd4O89016 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.41□□□□□ -0.1
Abcd4O89016 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.41□□□□□ -0.1
Abcd4O89016 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Abcd4O89016 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.41□□□□□ -0.1
Abcd4O89016 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abcd4O89016 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Abcd4O89016 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Abcd4O89016 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.4□□□□□ -0.1
Abcd4O89016 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.4□□□□□ -0.1
Abcd4O89016 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.4□□□□□ -0.1
Abcd4O89016 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.4□□□□□ -0.1
Abcd4O89016 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.4□□□□□ -0.1
Abcd4O89016 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.4□□□□□ -0.1
Abcd4O89016 Rps4l-201ENSMUST00000071745 943 ntBASIC14.4□□□□□ -0.1
Abcd4O89016 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Abcd4O89016 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Abcd4O89016 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Abcd4O89016 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Abcd4O89016 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.39□□□□□ -0.11
Abcd4O89016 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Abcd4O89016 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Abcd4O89016 Gm27867-201ENSMUST00000184778 125 ntBASIC14.39□□□□□ -0.11
Abcd4O89016 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Abcd4O89016 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.39□□□□□ -0.11
Abcd4O89016 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.39□□□□□ -0.11
Abcd4O89016 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Abcd4O89016 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.39□□□□□ -0.11
Abcd4O89016 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Abcd4O89016 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms