Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.35■□□□□ 0.21
Syn1O88935 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.35■□□□□ 0.21
Syn1O88935 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Syn1O88935 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syn1O88935 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syn1O88935 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.34■□□□□ 0.21
Syn1O88935 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Syn1O88935 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.34■□□□□ 0.21
Syn1O88935 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Syn1O88935 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syn1O88935 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.34■□□□□ 0.21
Syn1O88935 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Syn1O88935 Gm27437-201ENSMUST00000183429 107 ntBASIC16.34■□□□□ 0.21
Syn1O88935 Mir6990-201ENSMUST00000183724 91 ntBASIC16.34■□□□□ 0.21
Syn1O88935 Gm27622-201ENSMUST00000183779 60 ntBASIC16.34■□□□□ 0.21
Syn1O88935 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.34■□□□□ 0.21
Syn1O88935 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.34■□□□□ 0.21
Syn1O88935 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Syn1O88935 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Syn1O88935 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Syn1O88935 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syn1O88935 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syn1O88935 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syn1O88935 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syn1O88935 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Syn1O88935 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Syn1O88935 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Syn1O88935 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Syn1O88935 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Syn1O88935 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.33■□□□□ 0.2
Syn1O88935 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Syn1O88935 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Syn1O88935 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Syn1O88935 Gm13597-201ENSMUST00000121239 375 ntBASIC16.33■□□□□ 0.2
Syn1O88935 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Syn1O88935 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.33■□□□□ 0.2
Syn1O88935 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Syn1O88935 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Syn1O88935 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Syn1O88935 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Syn1O88935 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Syn1O88935 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Syn1O88935 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Syn1O88935 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Syn1O88935 Gm15427-201ENSMUST00000117288 531 ntBASIC16.32■□□□□ 0.2
Syn1O88935 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.32■□□□□ 0.2
Syn1O88935 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.32■□□□□ 0.2
Syn1O88935 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Syn1O88935 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syn1O88935 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Syn1O88935 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Syn1O88935 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Syn1O88935 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syn1O88935 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Syn1O88935 Gm45612-201ENSMUST00000211320 160 ntBASIC16.32■□□□□ 0.2
Syn1O88935 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syn1O88935 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Syn1O88935 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Syn1O88935 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syn1O88935 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syn1O88935 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syn1O88935 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Syn1O88935 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syn1O88935 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syn1O88935 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.32■□□□□ 0.2
Syn1O88935 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Syn1O88935 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.31■□□□□ 0.2
Syn1O88935 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Gm7787-201ENSMUST00000216858 688 ntBASIC16.31■□□□□ 0.2
Syn1O88935 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms