Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Best1O88870 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.27■□□□□ 0.04
Best1O88870 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.27■□□□□ 0.04
Best1O88870 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.27■□□□□ 0.04
Best1O88870 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.27■□□□□ 0.04
Best1O88870 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Best1O88870 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.27■□□□□ 0.04
Best1O88870 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Best1O88870 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Best1O88870 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Best1O88870 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.27■□□□□ 0.03
Best1O88870 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Best1O88870 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Best1O88870 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Best1O88870 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.26■□□□□ 0.03
Best1O88870 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Best1O88870 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Best1O88870 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.26■□□□□ 0.03
Best1O88870 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Best1O88870 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Best1O88870 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Best1O88870 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Best1O88870 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Best1O88870 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Best1O88870 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Best1O88870 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.26■□□□□ 0.03
Best1O88870 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Best1O88870 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Best1O88870 Gm5682-201ENSMUST00000173402 505 ntBASIC15.26■□□□□ 0.03
Best1O88870 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.26■□□□□ 0.03
Best1O88870 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Best1O88870 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.26■□□□□ 0.03
Best1O88870 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.26■□□□□ 0.03
Best1O88870 Psmb5-202ENSMUST00000227257 622 ntBASIC15.26■□□□□ 0.03
Best1O88870 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Best1O88870 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Best1O88870 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Best1O88870 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Best1O88870 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Best1O88870 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Best1O88870 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.26■□□□□ 0.03
Best1O88870 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.26■□□□□ 0.03
Best1O88870 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.26■□□□□ 0.03
Best1O88870 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.26■□□□□ 0.03
Best1O88870 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.25■□□□□ 0.03
Best1O88870 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.25■□□□□ 0.03
Best1O88870 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.25■□□□□ 0.03
Best1O88870 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.25■□□□□ 0.03
Best1O88870 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Gm27628-201ENSMUST00000184911 107 ntBASIC15.25■□□□□ 0.03
Best1O88870 Gm37153-201ENSMUST00000193637 231 ntBASIC15.25■□□□□ 0.03
Best1O88870 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.25■□□□□ 0.03
Best1O88870 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.25■□□□□ 0.03
Best1O88870 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.25■□□□□ 0.03
Best1O88870 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Best1O88870 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.25■□□□□ 0.03
Best1O88870 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Best1O88870 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Best1O88870 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Best1O88870 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Best1O88870 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.24■□□□□ 0.03
Best1O88870 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms