Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops6O88545 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Cops6O88545 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.41■□□□□ 0.7
Cops6O88545 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops6O88545 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cops6O88545 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cops6O88545 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cops6O88545 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cops6O88545 Gm14822-201ENSMUST00000122247 291 ntBASIC19.4■□□□□ 0.7
Cops6O88545 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
Cops6O88545 Mir8117-201ENSMUST00000184773 107 ntBASIC19.4■□□□□ 0.7
Cops6O88545 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.4■□□□□ 0.7
Cops6O88545 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.4■□□□□ 0.7
Cops6O88545 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.4■□□□□ 0.7
Cops6O88545 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.4■□□□□ 0.7
Cops6O88545 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cops6O88545 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cops6O88545 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cops6O88545 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cops6O88545 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cops6O88545 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cops6O88545 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cops6O88545 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cops6O88545 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cops6O88545 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cops6O88545 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Cops6O88545 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cops6O88545 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cops6O88545 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.39■□□□□ 0.69
Cops6O88545 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.39■□□□□ 0.69
Cops6O88545 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cops6O88545 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.39■□□□□ 0.69
Cops6O88545 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.39■□□□□ 0.69
Cops6O88545 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.39■□□□□ 0.69
Cops6O88545 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.39■□□□□ 0.69
Cops6O88545 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.39■□□□□ 0.69
Cops6O88545 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cops6O88545 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.38■□□□□ 0.69
Cops6O88545 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops6O88545 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops6O88545 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cops6O88545 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.38■□□□□ 0.69
Cops6O88545 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops6O88545 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops6O88545 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops6O88545 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cops6O88545 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops6O88545 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Cops6O88545 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops6O88545 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops6O88545 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cops6O88545 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops6O88545 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops6O88545 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops6O88545 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops6O88545 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cops6O88545 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops6O88545 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops6O88545 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops6O88545 Grk6-207ENSMUST00000225925 2769 ntBASIC19.37■□□□□ 0.69
Cops6O88545 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.37■□□□□ 0.69
Cops6O88545 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.37■□□□□ 0.69
Cops6O88545 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.37■□□□□ 0.69
Cops6O88545 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops6O88545 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cops6O88545 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops6O88545 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops6O88545 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops6O88545 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops6O88545 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
Cops6O88545 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cops6O88545 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops6O88545 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.36■□□□□ 0.69
Cops6O88545 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.36■□□□□ 0.69
Cops6O88545 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cops6O88545 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cops6O88545 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.36■□□□□ 0.69
Cops6O88545 Gm9682-201ENSMUST00000197505 556 ntBASIC19.36■□□□□ 0.69
Cops6O88545 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.36■□□□□ 0.69
Cops6O88545 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cops6O88545 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops6O88545 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cops6O88545 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.36■□□□□ 0.69
Cops6O88545 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms