Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cops3O88543 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.3□□□□□ -0.12
Cops3O88543 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cops3O88543 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.3□□□□□ -0.12
Cops3O88543 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.3□□□□□ -0.12
Cops3O88543 Gm2274-201ENSMUST00000184539 609 ntBASIC14.3□□□□□ -0.12
Cops3O88543 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.3□□□□□ -0.12
Cops3O88543 Gm29707-201ENSMUST00000196325 491 ntBASIC14.3□□□□□ -0.12
Cops3O88543 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cops3O88543 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cops3O88543 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cops3O88543 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.3□□□□□ -0.12
Cops3O88543 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops3O88543 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.29□□□□□ -0.12
Cops3O88543 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.29□□□□□ -0.12
Cops3O88543 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.29□□□□□ -0.12
Cops3O88543 Gm13436-201ENSMUST00000120418 567 ntBASIC14.29□□□□□ -0.12
Cops3O88543 Gm13474-201ENSMUST00000122466 815 ntBASIC14.29□□□□□ -0.12
Cops3O88543 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Gm27011-201ENSMUST00000182352 972 ntBASIC14.29□□□□□ -0.12
Cops3O88543 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cops3O88543 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cops3O88543 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops3O88543 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.28□□□□□ -0.12
Cops3O88543 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cops3O88543 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.28□□□□□ -0.12
Cops3O88543 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.28□□□□□ -0.12
Cops3O88543 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops3O88543 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms