Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm2O35900 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm2O35900 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm2O35900 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm2O35900 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lsm2O35900 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm2O35900 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm2O35900 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Lsm2O35900 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm2O35900 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.22□□□□□ -0.13
Lsm2O35900 Gm11539-201ENSMUST00000119837 557 ntBASIC14.22□□□□□ -0.13
Lsm2O35900 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.22□□□□□ -0.13
Lsm2O35900 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.22□□□□□ -0.13
Lsm2O35900 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Lsm2O35900 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm2O35900 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm2O35900 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm2O35900 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm2O35900 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.21□□□□□ -0.13
Lsm2O35900 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm2O35900 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm2O35900 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm2O35900 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm2O35900 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Lsm2O35900 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm2O35900 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lsm2O35900 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.21□□□□□ -0.13
Lsm2O35900 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm2O35900 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.21□□□□□ -0.13
Lsm2O35900 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm2O35900 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm2O35900 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Lsm2O35900 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lsm2O35900 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lsm2O35900 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Lsm2O35900 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.2□□□□□ -0.14
Lsm2O35900 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.2□□□□□ -0.14
Lsm2O35900 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.2□□□□□ -0.14
Lsm2O35900 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Lsm2O35900 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.2□□□□□ -0.14
Lsm2O35900 Timm23-208ENSMUST00000226683 750 ntBASIC14.2□□□□□ -0.14
Lsm2O35900 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Lsm2O35900 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Lsm2O35900 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lsm2O35900 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Lsm2O35900 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.2□□□□□ -0.14
Lsm2O35900 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Lsm2O35900 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm2O35900 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Lsm2O35900 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.19□□□□□ -0.14
Lsm2O35900 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.19□□□□□ -0.14
Lsm2O35900 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Lsm2O35900 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Gm29707-201ENSMUST00000196325 491 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms