Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Gm13015-201ENSMUST00000118674 204 ntBASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Gm17420-201ENSMUST00000164753 153 ntBASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a3E9PWQ3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Gm15806-201ENSMUST00000120696 955 ntBASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Gm15358-201ENSMUST00000119249 520 ntBASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Gm9824-201ENSMUST00000178707 561 ntBASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Gm5035-201ENSMUST00000215581 927 ntBASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col6a3E9PWQ3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a3E9PWQ3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Gm12091-201ENSMUST00000146791 830 ntBASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms