Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Mir5130-201ENSMUST00000175160 84 ntBASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12-1A0N8R1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Gm45058-201ENSMUST00000205810 766 ntBASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12-1A0N8R1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Gm27011-201ENSMUST00000182352 972 ntBASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-1A0N8R1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms