Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Trav12-2A0N8N6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-2A0N8N6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-2A0N8N6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-2A0N8N6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-2A0N8N6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-2A0N8N6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav12-2A0N8N6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-2A0N8N6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-2A0N8N6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-2A0N8N6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Asic1-205ENSMUST00000228185 1818 ntBASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-2A0N8N6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.02□□□□□ -0.16
Trav12-2A0N8N6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Gm11950-201ENSMUST00000121615 838 ntBASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.02□□□□□ -0.17
Trav12-2A0N8N6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-2A0N8N6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms