Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.91□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm28033-201ENSMUST00000184224 96 ntBASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm18115-201ENSMUST00000221209 621 ntBASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.9□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trbv13-1A0A0B4J1P8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Gm17971-201ENSMUST00000190239 806 ntBASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-1A0A0B4J1P8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms