Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav21-dv12A0A075B6C4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm37722-201ENSMUST00000193757 208 ntBASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav21-dv12A0A075B6C4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav21-dv12A0A075B6C4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav21-dv12A0A075B6C4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav21-dv12A0A075B6C4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav21-dv12A0A075B6C4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.27□□□□□ -0.44
Trav21-dv12A0A075B6C4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav21-dv12A0A075B6C4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav21-dv12A0A075B6C4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav21-dv12A0A075B6C4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav21-dv12A0A075B6C4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm11355-201ENSMUST00000121120 306 ntBASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms