Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm5408-201ENSMUST00000197998 747 ntBASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Ap3s1-204ENSMUST00000225520 957 ntBASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm21956-201ENSMUST00000179946 522 ntBASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm10138-203ENSMUST00000206952 366 ntBASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12d-3A0A075B6A4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm7291-201ENSMUST00000199147 382 ntBASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm4974-201ENSMUST00000209974 875 ntBASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms