Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 RNU6-471P-201ENST00000383944 106 ntBASIC-2.78□□□□□ -2.85
LRRC42Q9Y546 SNORD78.1-201ENST00000390866 65 ntBASIC-2.78□□□□□ -2.85
LRRC42Q9Y546 MIR4317-201ENST00000637586 65 ntBASIC-2.78□□□□□ -2.85
LRRC42Q9Y546 RNA5SP224-201ENST00000365069 126 ntBASIC-2.79□□□□□ -2.86
LRRC42Q9Y546 SNORD54-201ENST00000459159 67 ntBASIC-2.79□□□□□ -2.86
LRRC42Q9Y546 RNA5SP170-201ENST00000517150 101 ntBASIC-2.8□□□□□ -2.86
LRRC42Q9Y546 MIR5693-201ENST00000577722 73 ntBASIC-2.8□□□□□ -2.86
LRRC42Q9Y546 RNU6-776P-201ENST00000364403 104 ntBASIC-2.81□□□□□ -2.86
LRRC42Q9Y546 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.81□□□□□ -2.86
LRRC42Q9Y546 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.81□□□□□ -2.86
LRRC42Q9Y546 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.82□□□□□ -2.86
LRRC42Q9Y546 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.82□□□□□ -2.86
LRRC42Q9Y546 RNY4P25-201ENST00000459254 96 ntBASIC-2.82□□□□□ -2.86
LRRC42Q9Y546 MIR656-201ENST00000385224 78 ntBASIC-2.84□□□□□ -2.86
LRRC42Q9Y546 AC114801.3-201ENST00000510231 177 ntBASIC-2.84□□□□□ -2.86
LRRC42Q9Y546 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.85□□□□□ -2.87
LRRC42Q9Y546 MIR548AL-201ENST00000578416 97 ntBASIC-2.85□□□□□ -2.87
LRRC42Q9Y546 RNU4-33P-201ENST00000364316 85 ntBASIC-2.86□□□□□ -2.87
LRRC42Q9Y546 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.87□□□□□ -2.87
LRRC42Q9Y546 RNU6-854P-201ENST00000364036 107 ntBASIC-2.87□□□□□ -2.87
LRRC42Q9Y546 SNORD45C-201ENST00000383893 79 ntBASIC-2.87□□□□□ -2.87
LRRC42Q9Y546 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.87□□□□□ -2.87
LRRC42Q9Y546 SNORD115.2-201ENST00000391126 59 ntBASIC-2.88□□□□□ -2.87
LRRC42Q9Y546 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.89□□□□□ -2.87
LRRC42Q9Y546 RNU6-737P-201ENST00000365370 107 ntBASIC-2.89□□□□□ -2.87
LRRC42Q9Y546 MIR4662A-201ENST00000637499 67 ntBASIC-2.89□□□□□ -2.87
LRRC42Q9Y546 RNU6-836P-201ENST00000362920 107 ntBASIC-2.9□□□□□ -2.87
LRRC42Q9Y546 AL359920.1-201ENST00000618332 176 ntBASIC-2.9□□□□□ -2.87
LRRC42Q9Y546 RNU6-829P-201ENST00000363700 112 ntBASIC-2.92□□□□□ -2.88
LRRC42Q9Y546 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.92□□□□□ -2.88
LRRC42Q9Y546 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.92□□□□□ -2.88
LRRC42Q9Y546 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.92□□□□□ -2.88
LRRC42Q9Y546 MIR633-201ENST00000384821 98 ntBASIC-2.93□□□□□ -2.88
LRRC42Q9Y546 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.93□□□□□ -2.88
LRRC42Q9Y546 RNA5SP93-201ENST00000362525 114 ntBASIC-2.95□□□□□ -2.88
LRRC42Q9Y546 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.97□□□□□ -2.88
LRRC42Q9Y546 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.97□□□□□ -2.88
LRRC42Q9Y546 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-2.97□□□□□ -2.88
LRRC42Q9Y546 RNU6-808P-201ENST00000391233 108 ntBASIC-2.98□□□□□ -2.89
LRRC42Q9Y546 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.98□□□□□ -2.89
LRRC42Q9Y546 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.99□□□□□ -2.89
LRRC42Q9Y546 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.99□□□□□ -2.89
LRRC42Q9Y546 Y_RNA.335-201ENST00000365299 96 ntBASIC-3□□□□□ -2.89
LRRC42Q9Y546 Y_RNA.830-201ENST00000628531 96 ntBASIC-3□□□□□ -2.89
LRRC42Q9Y546 MIR1302-4-201ENST00000408701 150 ntBASIC-3.02□□□□□ -2.89
LRRC42Q9Y546 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.03□□□□□ -2.89
LRRC42Q9Y546 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.05□□□□□ -2.9
LRRC42Q9Y546 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.05□□□□□ -2.9
LRRC42Q9Y546 RNU6-788P-201ENST00000390967 104 ntBASIC-3.06□□□□□ -2.9
LRRC42Q9Y546 SNORD115-45-201ENST00000391078 81 ntBASIC-3.06□□□□□ -2.9
LRRC42Q9Y546 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.06□□□□□ -2.9
LRRC42Q9Y546 SNORD114-13-201ENST00000364377 74 ntBASIC-3.07□□□□□ -2.9
LRRC42Q9Y546 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.07□□□□□ -2.9
LRRC42Q9Y546 MIR124-1-201ENST00000385275 85 ntBASIC-3.07□□□□□ -2.9
LRRC42Q9Y546 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.07□□□□□ -2.9
LRRC42Q9Y546 RNU6-838P-201ENST00000363399 108 ntBASIC-3.08□□□□□ -2.9
LRRC42Q9Y546 AC079150.2-201ENST00000443733 78 ntBASIC-3.08□□□□□ -2.9
LRRC42Q9Y546 MIR545-201ENST00000385085 106 ntBASIC-3.09□□□□□ -2.9
LRRC42Q9Y546 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.1□□□□□ -2.91
LRRC42Q9Y546 RNU6-986P-201ENST00000363133 102 ntBASIC-3.12□□□□□ -2.91
LRRC42Q9Y546 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.13□□□□□ -2.91
LRRC42Q9Y546 MIR548AH-201ENST00000637109 76 ntBASIC-3.13□□□□□ -2.91
LRRC42Q9Y546 RNU6-59P-201ENST00000384787 107 ntBASIC-3.14□□□□□ -2.91
LRRC42Q9Y546 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.14□□□□□ -2.91
LRRC42Q9Y546 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.17□□□□□ -2.92
LRRC42Q9Y546 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.18□□□□□ -2.92
LRRC42Q9Y546 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.19□□□□□ -2.92
LRRC42Q9Y546 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.19□□□□□ -2.92
LRRC42Q9Y546 RNU6-753P-201ENST00000363926 107 ntBASIC-3.23□□□□□ -2.93
LRRC42Q9Y546 AC125388.1-201ENST00000459631 156 ntBASIC-3.23□□□□□ -2.93
LRRC42Q9Y546 RNU6-422P-201ENST00000384632 107 ntBASIC-3.26□□□□□ -2.93
LRRC42Q9Y546 RNU6-803P-201ENST00000516034 102 ntBASIC-3.26□□□□□ -2.93
LRRC42Q9Y546 MIR509-1-201ENST00000385265 94 ntBASIC-3.28□□□□□ -2.93
LRRC42Q9Y546 MIR509-2-201ENST00000390724 91 ntBASIC-3.28□□□□□ -2.93
LRRC42Q9Y546 MIR548F3-201ENST00000408509 87 ntBASIC-3.28□□□□□ -2.93
LRRC42Q9Y546 RNU6-936P-201ENST00000384005 107 ntBASIC-3.29□□□□□ -2.94
LRRC42Q9Y546 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.3□□□□□ -2.94
LRRC42Q9Y546 RNU6-499P-201ENST00000365615 107 ntBASIC-3.3□□□□□ -2.94
LRRC42Q9Y546 RNU6-930P-201ENST00000390938 100 ntBASIC-3.31□□□□□ -2.94
LRRC42Q9Y546 RNY4P7-201ENST00000364600 96 ntBASIC-3.32□□□□□ -2.94
LRRC42Q9Y546 RNU6-1043P-201ENST00000410355 99 ntBASIC-3.35□□□□□ -2.95
LRRC42Q9Y546 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.39□□□□□ -2.95
LRRC42Q9Y546 RNA5SP106-201ENST00000517274 100 ntBASIC-3.39□□□□□ -2.95
LRRC42Q9Y546 Y_RNA.406-201ENST00000383984 100 ntBASIC-3.4□□□□□ -2.95
LRRC42Q9Y546 RNY4P10-201ENST00000365571 96 ntBASIC-3.44□□□□□ -2.96
LRRC42Q9Y546 RNU6-987P-201ENST00000384759 104 ntBASIC-3.46□□□□□ -2.96
LRRC42Q9Y546 RNU6-638P-201ENST00000516582 104 ntBASIC-3.46□□□□□ -2.96
LRRC42Q9Y546 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.47□□□□□ -2.96
LRRC42Q9Y546 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.52□□□□□ -2.97
LRRC42Q9Y546 RNU6-665P-201ENST00000384639 107 ntBASIC-3.52□□□□□ -2.97
LRRC42Q9Y546 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.52□□□□□ -2.97
LRRC42Q9Y546 RNY4-201ENST00000516507 96 ntBASIC-3.54□□□□□ -2.98
LRRC42Q9Y546 RNU6-614P-201ENST00000384369 107 ntBASIC-3.55□□□□□ -2.98
LRRC42Q9Y546 U6.59-201ENST00000615686 107 ntBASIC-3.55□□□□□ -2.98
LRRC42Q9Y546 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.64□□□□□ -2.99
LRRC42Q9Y546 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.64□□□□□ -2.99
LRRC42Q9Y546 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.65□□□□□ -2.99
LRRC42Q9Y546 SNORD111B-201ENST00000408587 80 ntBASIC-3.65□□□□□ -2.99
LRRC42Q9Y546 SNORA72.7-201ENST00000516349 94 ntBASIC-3.66□□□□□ -3
LRRC42Q9Y546 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.67□□□□□ -3
Retrieved 100 of 98,524 protein–RNA pairs in 314.4 ms