Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SNORD113-4-201ENST00000364802 75 ntBASIC-3.34□□□□□ -2.94
CCDC65Q8IXS2 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.35□□□□□ -2.95
CCDC65Q8IXS2 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.37□□□□□ -2.95
CCDC65Q8IXS2 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.37□□□□□ -2.95
CCDC65Q8IXS2 RNY4P7-201ENST00000364600 96 ntBASIC-3.38□□□□□ -2.95
CCDC65Q8IXS2 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.38□□□□□ -2.95
CCDC65Q8IXS2 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.38□□□□□ -2.95
CCDC65Q8IXS2 RNU6-822P-201ENST00000362707 106 ntBASIC-3.39□□□□□ -2.95
CCDC65Q8IXS2 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.39□□□□□ -2.95
CCDC65Q8IXS2 MIR4317-201ENST00000637586 65 ntBASIC-3.41□□□□□ -2.96
CCDC65Q8IXS2 RNA5SP93-201ENST00000362525 114 ntBASIC-3.42□□□□□ -2.96
CCDC65Q8IXS2 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.43□□□□□ -2.96
CCDC65Q8IXS2 RNU4-33P-201ENST00000364316 85 ntBASIC-3.43□□□□□ -2.96
CCDC65Q8IXS2 MIR548H4-201ENST00000408689 111 ntBASIC-3.43□□□□□ -2.96
CCDC65Q8IXS2 AC139453.2-201ENST00000487255 133 ntBASIC-3.45□□□□□ -2.96
CCDC65Q8IXS2 RNU6-829P-201ENST00000363700 112 ntBASIC-3.46□□□□□ -2.96
CCDC65Q8IXS2 MIR548AL-201ENST00000578416 97 ntBASIC-3.46□□□□□ -2.96
CCDC65Q8IXS2 MIR633-201ENST00000384821 98 ntBASIC-3.49□□□□□ -2.97
CCDC65Q8IXS2 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.49□□□□□ -2.97
CCDC65Q8IXS2 AL731768.1-201ENST00000603124 139 ntBASIC-3.49□□□□□ -2.97
CCDC65Q8IXS2 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.53□□□□□ -2.97
CCDC65Q8IXS2 RNA5SP224-201ENST00000365069 126 ntBASIC-3.54□□□□□ -2.98
CCDC65Q8IXS2 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.55□□□□□ -2.98
CCDC65Q8IXS2 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.55□□□□□ -2.98
CCDC65Q8IXS2 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.59□□□□□ -2.98
CCDC65Q8IXS2 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.6□□□□□ -2.99
CCDC65Q8IXS2 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.61□□□□□ -2.99
CCDC65Q8IXS2 MIR656-201ENST00000385224 78 ntBASIC-3.61□□□□□ -2.99
CCDC65Q8IXS2 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.63□□□□□ -2.99
CCDC65Q8IXS2 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.63□□□□□ -2.99
CCDC65Q8IXS2 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.63□□□□□ -2.99
CCDC65Q8IXS2 RNU6-230P-201ENST00000362457 104 ntBASIC-3.64□□□□□ -2.99
CCDC65Q8IXS2 RNU6-836P-201ENST00000362920 107 ntBASIC-3.65□□□□□ -2.99
CCDC65Q8IXS2 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.65□□□□□ -2.99
CCDC65Q8IXS2 SNORD45C-201ENST00000383893 79 ntBASIC-3.65□□□□□ -2.99
CCDC65Q8IXS2 AC079150.2-201ENST00000443733 78 ntBASIC-3.65□□□□□ -2.99
CCDC65Q8IXS2 SNORD115.2-201ENST00000391126 59 ntBASIC-3.66□□□□□ -3
CCDC65Q8IXS2 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.66□□□□□ -3
CCDC65Q8IXS2 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.68□□□□□ -3
CCDC65Q8IXS2 RNU6-808P-201ENST00000391233 108 ntBASIC-3.68□□□□□ -3
CCDC65Q8IXS2 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.7□□□□□ -3
CCDC65Q8IXS2 RNU6-838P-201ENST00000363399 108 ntBASIC-3.71□□□□□ -3
CCDC65Q8IXS2 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.71□□□□□ -3
CCDC65Q8IXS2 RNY4P25-201ENST00000459254 96 ntBASIC-3.72□□□□□ -3
CCDC65Q8IXS2 MIR5693-201ENST00000577722 73 ntBASIC-3.72□□□□□ -3
CCDC65Q8IXS2 AC125388.1-201ENST00000459631 156 ntBASIC-3.73□□□□□ -3.01
CCDC65Q8IXS2 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.75□□□□□ -3.01
CCDC65Q8IXS2 RNU6-854P-201ENST00000364036 107 ntBASIC-3.75□□□□□ -3.01
CCDC65Q8IXS2 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.76□□□□□ -3.01
CCDC65Q8IXS2 RNY4-201ENST00000516507 96 ntBASIC-3.76□□□□□ -3.01
CCDC65Q8IXS2 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.77□□□□□ -3.01
CCDC65Q8IXS2 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.77□□□□□ -3.01
CCDC65Q8IXS2 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.79□□□□□ -3.02
CCDC65Q8IXS2 AL359920.1-201ENST00000618332 176 ntBASIC-3.8□□□□□ -3.02
CCDC65Q8IXS2 RNU6-737P-201ENST00000365370 107 ntBASIC-3.81□□□□□ -3.02
CCDC65Q8IXS2 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.81□□□□□ -3.02
CCDC65Q8IXS2 RNU6-499P-201ENST00000365615 107 ntBASIC-3.84□□□□□ -3.02
CCDC65Q8IXS2 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.85□□□□□ -3.03
CCDC65Q8IXS2 RNU6-59P-201ENST00000384787 107 ntBASIC-3.87□□□□□ -3.03
CCDC65Q8IXS2 RNU6-638P-201ENST00000516582 104 ntBASIC-3.88□□□□□ -3.03
CCDC65Q8IXS2 RNU6-986P-201ENST00000363133 102 ntBASIC-3.89□□□□□ -3.03
CCDC65Q8IXS2 RNU6-753P-201ENST00000363926 107 ntBASIC-3.89□□□□□ -3.03
CCDC65Q8IXS2 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.91□□□□□ -3.04
CCDC65Q8IXS2 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.91□□□□□ -3.04
CCDC65Q8IXS2 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.94□□□□□ -3.04
CCDC65Q8IXS2 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.95□□□□□ -3.04
CCDC65Q8IXS2 RNU6-936P-201ENST00000384005 107 ntBASIC-3.96□□□□□ -3.04
CCDC65Q8IXS2 MIR545-201ENST00000385085 106 ntBASIC-3.97□□□□□ -3.04
CCDC65Q8IXS2 RNU6-788P-201ENST00000390967 104 ntBASIC-3.97□□□□□ -3.04
CCDC65Q8IXS2 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.99□□□□□ -3.05
CCDC65Q8IXS2 MIR548F3-201ENST00000408509 87 ntBASIC-3.99□□□□□ -3.05
CCDC65Q8IXS2 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.99□□□□□ -3.05
CCDC65Q8IXS2 SNORA72.7-201ENST00000516349 94 ntBASIC-4□□□□□ -3.05
CCDC65Q8IXS2 MIR124-1-201ENST00000385275 85 ntBASIC-4.01□□□□□ -3.05
CCDC65Q8IXS2 RNU6-930P-201ENST00000390938 100 ntBASIC-4.02□□□□□ -3.05
CCDC65Q8IXS2 SNORD114-13-201ENST00000364377 74 ntBASIC-4.03□□□□□ -3.05
CCDC65Q8IXS2 RNU6-803P-201ENST00000516034 102 ntBASIC-4.05□□□□□ -3.06
CCDC65Q8IXS2 RNU6-1044P-201ENST00000384755 107 ntBASIC-4.08□□□□□ -3.06
CCDC65Q8IXS2 SNORD115-45-201ENST00000391078 81 ntBASIC-4.1□□□□□ -3.07
CCDC65Q8IXS2 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.11□□□□□ -3.07
CCDC65Q8IXS2 MIR548AH-201ENST00000637109 76 ntBASIC-4.16□□□□□ -3.08
CCDC65Q8IXS2 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-4.18□□□□□ -3.08
CCDC65Q8IXS2 Y_RNA.566-201ENST00000384735 101 ntBASIC-4.19□□□□□ -3.08
CCDC65Q8IXS2 RNU6-614P-201ENST00000384369 107 ntBASIC-4.2□□□□□ -3.08
CCDC65Q8IXS2 U6.59-201ENST00000615686 107 ntBASIC-4.2□□□□□ -3.08
CCDC65Q8IXS2 RNU6-422P-201ENST00000384632 107 ntBASIC-4.21□□□□□ -3.08
CCDC65Q8IXS2 RNU6-1121P-201ENST00000516802 109 ntBASIC-4.21□□□□□ -3.08
CCDC65Q8IXS2 DLEU2_4.2-201ENST00000616613 58 ntBASIC-4.28□□□□□ -3.09
CCDC65Q8IXS2 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.3□□□□□ -3.1
CCDC65Q8IXS2 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.31□□□□□ -3.1
CCDC65Q8IXS2 RNU6-987P-201ENST00000384759 104 ntBASIC-4.32□□□□□ -3.1
CCDC65Q8IXS2 MIR509-1-201ENST00000385265 94 ntBASIC-4.34□□□□□ -3.1
CCDC65Q8IXS2 MIR509-2-201ENST00000390724 91 ntBASIC-4.34□□□□□ -3.1
CCDC65Q8IXS2 Y_RNA.511-201ENST00000384514 103 ntBASIC-4.37□□□□□ -3.11
CCDC65Q8IXS2 RNA5SP106-201ENST00000517274 100 ntBASIC-4.44□□□□□ -3.12
CCDC65Q8IXS2 RNY4P10-201ENST00000365571 96 ntBASIC-4.51□□□□□ -3.13
CCDC65Q8IXS2 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.52□□□□□ -3.13
CCDC65Q8IXS2 MTND4LP19-201ENST00000403051 166 ntBASIC-4.58□□□□□ -3.14
CCDC65Q8IXS2 SNORD111B-201ENST00000408587 80 ntBASIC-4.61□□□□□ -3.15
CCDC65Q8IXS2 U6.103-201ENST00000637085 61 ntBASIC-4.7□□□□□ -3.16
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms