Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 SNORD30.1-201ENST00000391309 70 ntBASIC-2.96□□□□□ -2.88
CSPG4Q6UVK1 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.96□□□□□ -2.88
CSPG4Q6UVK1 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.96□□□□□ -2.88
CSPG4Q6UVK1 AC114801.3-201ENST00000510231 177 ntBASIC-2.97□□□□□ -2.88
CSPG4Q6UVK1 RNU6-346P-201ENST00000516288 111 ntBASIC-2.97□□□□□ -2.88
CSPG4Q6UVK1 Y_RNA.702-201ENST00000516843 96 ntBASIC-2.97□□□□□ -2.88
CSPG4Q6UVK1 MIR488-201ENST00000365739 83 ntBASIC-2.97□□□□□ -2.89
CSPG4Q6UVK1 RNU6-871P-201ENST00000516122 100 ntBASIC-2.98□□□□□ -2.89
CSPG4Q6UVK1 RNU6-446P-201ENST00000362827 106 ntBASIC-2.99□□□□□ -2.89
CSPG4Q6UVK1 RNU6-986P-201ENST00000363133 102 ntBASIC-2.99□□□□□ -2.89
CSPG4Q6UVK1 RNU6-471P-201ENST00000383944 106 ntBASIC-2.99□□□□□ -2.89
CSPG4Q6UVK1 IGLL4P-201ENST00000614590 133 ntBASIC-2.99□□□□□ -2.89
CSPG4Q6UVK1 RNU6-1168P-201ENST00000390831 104 ntBASIC-3□□□□□ -2.89
CSPG4Q6UVK1 RNU6-59P-201ENST00000384787 107 ntBASIC-3.01□□□□□ -2.89
CSPG4Q6UVK1 AC044792.1-201ENST00000593294 196 ntBASIC-3.01□□□□□ -2.89
CSPG4Q6UVK1 RNY1P5-201ENST00000383890 115 ntBASIC-3.02□□□□□ -2.89
CSPG4Q6UVK1 AC090425.1-201ENST00000610007 140 ntBASIC-3.02□□□□□ -2.89
CSPG4Q6UVK1 RNU6-294P-201ENST00000364999 102 ntBASIC-3.03□□□□□ -2.89
CSPG4Q6UVK1 RNY4P30-201ENST00000410216 95 ntBASIC-3.03□□□□□ -2.89
CSPG4Q6UVK1 U6.111-201ENST00000636093 83 ntBASIC-3.03□□□□□ -2.89
CSPG4Q6UVK1 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.04□□□□□ -2.9
CSPG4Q6UVK1 SNORD113-1-201ENST00000365321 69 ntBASIC-3.05□□□□□ -2.9
CSPG4Q6UVK1 RNU6-49P-201ENST00000384256 107 ntBASIC-3.05□□□□□ -2.9
CSPG4Q6UVK1 SNORD113-4-201ENST00000364802 75 ntBASIC-3.07□□□□□ -2.9
CSPG4Q6UVK1 MIR1255A-201ENST00000408338 113 ntBASIC-3.07□□□□□ -2.9
CSPG4Q6UVK1 RNU6-327P-201ENST00000516270 127 ntBASIC-3.07□□□□□ -2.9
CSPG4Q6UVK1 RNU6-838P-201ENST00000363399 108 ntBASIC-3.08□□□□□ -2.9
CSPG4Q6UVK1 RNU6-627P-201ENST00000364032 102 ntBASIC-3.08□□□□□ -2.9
CSPG4Q6UVK1 RNU6-147P-201ENST00000383983 107 ntBASIC-3.09□□□□□ -2.9
CSPG4Q6UVK1 MIR450A2-201ENST00000385022 100 ntBASIC-3.09□□□□□ -2.9
CSPG4Q6UVK1 RNU6-829P-201ENST00000363700 112 ntBASIC-3.11□□□□□ -2.91
CSPG4Q6UVK1 RNU6-32P-201ENST00000383948 107 ntBASIC-3.12□□□□□ -2.91
CSPG4Q6UVK1 RNU6-13P-201ENST00000384248 107 ntBASIC-3.12□□□□□ -2.91
CSPG4Q6UVK1 RNU6-12P-201ENST00000384604 107 ntBASIC-3.12□□□□□ -2.91
CSPG4Q6UVK1 RNU6-41P-201ENST00000384741 107 ntBASIC-3.12□□□□□ -2.91
CSPG4Q6UVK1 SNORA26.2-201ENST00000390922 122 ntBASIC-3.12□□□□□ -2.91
CSPG4Q6UVK1 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.12□□□□□ -2.91
CSPG4Q6UVK1 AL365222.1-201ENST00000614661 98 ntBASIC-3.12□□□□□ -2.91
CSPG4Q6UVK1 RNU6-279P-201ENST00000391297 101 ntBASIC-3.13□□□□□ -2.91
CSPG4Q6UVK1 RNU6-820P-201ENST00000384273 107 ntBASIC-3.14□□□□□ -2.91
CSPG4Q6UVK1 RNU6-22P-201ENST00000384355 107 ntBASIC-3.15□□□□□ -2.91
CSPG4Q6UVK1 MIR4503-201ENST00000582187 83 ntBASIC-3.15□□□□□ -2.91
CSPG4Q6UVK1 RNU6-620P-201ENST00000384017 96 ntBASIC-3.16□□□□□ -2.92
CSPG4Q6UVK1 RNU6-1045P-201ENST00000516321 107 ntBASIC-3.16□□□□□ -2.92
CSPG4Q6UVK1 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.19□□□□□ -2.92
CSPG4Q6UVK1 RNU6-463P-201ENST00000384340 107 ntBASIC-3.19□□□□□ -2.92
CSPG4Q6UVK1 RNU6-242P-201ENST00000384359 107 ntBASIC-3.19□□□□□ -2.92
CSPG4Q6UVK1 Y_RNA.261-201ENST00000364631 102 ntBASIC-3.2□□□□□ -2.92
CSPG4Q6UVK1 MIR3202-2-201ENST00000635980 79 ntBASIC-3.21□□□□□ -2.92
CSPG4Q6UVK1 Y_RNA.464-201ENST00000384282 110 ntBASIC-3.22□□□□□ -2.92
CSPG4Q6UVK1 MIR494-201ENST00000349529 81 ntBASIC-3.22□□□□□ -2.93
CSPG4Q6UVK1 RNU6-485P-201ENST00000363475 107 ntBASIC-3.22□□□□□ -2.93
CSPG4Q6UVK1 RNA5SP89-201ENST00000410300 108 ntBASIC-3.22□□□□□ -2.93
CSPG4Q6UVK1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.23□□□□□ -2.93
CSPG4Q6UVK1 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.24□□□□□ -2.93
CSPG4Q6UVK1 Y_RNA.703-201ENST00000516846 111 ntBASIC-3.26□□□□□ -2.93
CSPG4Q6UVK1 RNU6-857P-201ENST00000515893 110 ntBASIC-3.26□□□□□ -2.93
CSPG4Q6UVK1 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.27□□□□□ -2.93
CSPG4Q6UVK1 RNU6-153P-201ENST00000364422 104 ntBASIC-3.27□□□□□ -2.93
CSPG4Q6UVK1 RNU6-81P-201ENST00000365608 104 ntBASIC-3.29□□□□□ -2.94
CSPG4Q6UVK1 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.3□□□□□ -2.94
CSPG4Q6UVK1 RNU6-930P-201ENST00000390938 100 ntBASIC-3.3□□□□□ -2.94
CSPG4Q6UVK1 RNU6-919P-201ENST00000516731 104 ntBASIC-3.3□□□□□ -2.94
CSPG4Q6UVK1 RNU6-753P-201ENST00000363926 107 ntBASIC-3.31□□□□□ -2.94
CSPG4Q6UVK1 MIR633-201ENST00000384821 98 ntBASIC-3.31□□□□□ -2.94
CSPG4Q6UVK1 RNU6-894P-201ENST00000517094 105 ntBASIC-3.35□□□□□ -2.95
CSPG4Q6UVK1 SNORD20-201ENST00000384550 80 ntBASIC-3.36□□□□□ -2.95
CSPG4Q6UVK1 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.38□□□□□ -2.95
CSPG4Q6UVK1 MIR548F3-201ENST00000408509 87 ntBASIC-3.39□□□□□ -2.95
CSPG4Q6UVK1 RNU6-936P-201ENST00000384005 107 ntBASIC-3.39□□□□□ -2.95
CSPG4Q6UVK1 MIR3133-201ENST00000583157 78 ntBASIC-3.4□□□□□ -2.95
CSPG4Q6UVK1 RNU6-1091P-201ENST00000363945 107 ntBASIC-3.41□□□□□ -2.95
CSPG4Q6UVK1 RNA5SP225-201ENST00000410874 135 ntBASIC-3.41□□□□□ -2.96
CSPG4Q6UVK1 RNU6-406P-201ENST00000516470 107 ntBASIC-3.42□□□□□ -2.96
CSPG4Q6UVK1 SNORD111B-201ENST00000408587 80 ntBASIC-3.42□□□□□ -2.96
CSPG4Q6UVK1 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.43□□□□□ -2.96
CSPG4Q6UVK1 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.43□□□□□ -2.96
CSPG4Q6UVK1 RNU6-499P-201ENST00000365615 107 ntBASIC-3.44□□□□□ -2.96
CSPG4Q6UVK1 MIR5582-201ENST00000579697 68 ntBASIC-3.44□□□□□ -2.96
CSPG4Q6UVK1 U6.103-201ENST00000637085 61 ntBASIC-3.44□□□□□ -2.96
CSPG4Q6UVK1 SNORD78.1-201ENST00000390866 65 ntBASIC-3.45□□□□□ -2.96
CSPG4Q6UVK1 MIR4662A-201ENST00000637499 67 ntBASIC-3.45□□□□□ -2.96
CSPG4Q6UVK1 RNU6-44P-201ENST00000384045 107 ntBASIC-3.5□□□□□ -2.97
CSPG4Q6UVK1 RNU6-614P-201ENST00000384369 107 ntBASIC-3.5□□□□□ -2.97
CSPG4Q6UVK1 MIR3671-201ENST00000580455 88 ntBASIC-3.5□□□□□ -2.97
CSPG4Q6UVK1 U6.59-201ENST00000615686 107 ntBASIC-3.5□□□□□ -2.97
CSPG4Q6UVK1 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.51□□□□□ -2.97
CSPG4Q6UVK1 AC079150.2-201ENST00000443733 78 ntBASIC-3.51□□□□□ -2.97
CSPG4Q6UVK1 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.53□□□□□ -2.97
CSPG4Q6UVK1 AC125388.1-201ENST00000459631 156 ntBASIC-3.53□□□□□ -2.97
CSPG4Q6UVK1 RNU6-313P-201ENST00000516317 112 ntBASIC-3.53□□□□□ -2.97
CSPG4Q6UVK1 MIR548M-201ENST00000408260 86 ntBASIC-3.54□□□□□ -2.98
CSPG4Q6UVK1 AL606753.1-201ENST00000427435 87 ntBASIC-3.55□□□□□ -2.98
CSPG4Q6UVK1 MIR3910-1-201ENST00000580936 111 ntBASIC-3.56□□□□□ -2.98
CSPG4Q6UVK1 RNU6-573P-201ENST00000383938 106 ntBASIC-3.56□□□□□ -2.98
CSPG4Q6UVK1 RNU6-215P-201ENST00000365169 102 ntBASIC-3.57□□□□□ -2.98
CSPG4Q6UVK1 RNU6-133P-201ENST00000383989 107 ntBASIC-3.58□□□□□ -2.98
CSPG4Q6UVK1 RNU6-794P-201ENST00000517261 64 ntBASIC-3.59□□□□□ -2.98
CSPG4Q6UVK1 RNY4P29-201ENST00000410801 97 ntBASIC-3.61□□□□□ -2.99
CSPG4Q6UVK1 RNY4P19-201ENST00000362530 96 ntBASIC-3.61□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms