Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SNORD116-19-201ENST00000384729 92 ntBASIC-1.78□□□□□ -2.69
HSPG2P98160 MIR606-201ENST00000384851 96 ntBASIC-1.78□□□□□ -2.69
HSPG2P98160 MIR450A1-201ENST00000362262 91 ntBASIC-1.79□□□□□ -2.7
HSPG2P98160 RNU6-986P-201ENST00000363133 102 ntBASIC-1.79□□□□□ -2.7
HSPG2P98160 RNU6-886P-201ENST00000384319 105 ntBASIC-1.8□□□□□ -2.7
HSPG2P98160 RNU6-242P-201ENST00000384359 107 ntBASIC-1.8□□□□□ -2.7
HSPG2P98160 MT-TG-201ENST00000387429 68 ntBASIC-1.8□□□□□ -2.7
HSPG2P98160 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.8□□□□□ -2.7
HSPG2P98160 AC114801.3-201ENST00000510231 177 ntBASIC-1.8□□□□□ -2.7
HSPG2P98160 RNU6-446P-201ENST00000362827 106 ntBASIC-1.8□□□□□ -2.7
HSPG2P98160 AP000770.2-201ENST00000623694 100 ntBASIC-1.81□□□□□ -2.7
HSPG2P98160 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.81□□□□□ -2.7
HSPG2P98160 RNU6-471P-201ENST00000383944 106 ntBASIC-1.82□□□□□ -2.7
HSPG2P98160 RNU6-640P-201ENST00000363693 105 ntBASIC-1.82□□□□□ -2.7
HSPG2P98160 RNU6-820P-201ENST00000384273 107 ntBASIC-1.82□□□□□ -2.7
HSPG2P98160 RNU6-463P-201ENST00000384340 107 ntBASIC-1.82□□□□□ -2.7
HSPG2P98160 RNU6-738P-201ENST00000384531 106 ntBASIC-1.82□□□□□ -2.7
HSPG2P98160 MTCYBP6-201ENST00000441810 138 ntBASIC-1.82□□□□□ -2.7
HSPG2P98160 AC090425.1-201ENST00000610007 140 ntBASIC-1.82□□□□□ -2.7
HSPG2P98160 MIR488-201ENST00000365739 83 ntBASIC-1.83□□□□□ -2.7
HSPG2P98160 RNU6-49P-201ENST00000384256 107 ntBASIC-1.83□□□□□ -2.7
HSPG2P98160 RNU6-59P-201ENST00000384787 107 ntBASIC-1.83□□□□□ -2.7
HSPG2P98160 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.83□□□□□ -2.7
HSPG2P98160 RNU6-787P-201ENST00000384032 107 ntBASIC-1.84□□□□□ -2.7
HSPG2P98160 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.84□□□□□ -2.7
HSPG2P98160 RNU6-388P-201ENST00000517012 105 ntBASIC-1.84□□□□□ -2.7
HSPG2P98160 RNU6-389P-201ENST00000517048 105 ntBASIC-1.84□□□□□ -2.7
HSPG2P98160 RNU6-22P-201ENST00000384355 107 ntBASIC-1.84□□□□□ -2.7
HSPG2P98160 SNORD113-4-201ENST00000364802 75 ntBASIC-1.85□□□□□ -2.71
HSPG2P98160 U6.111-201ENST00000636093 83 ntBASIC-1.85□□□□□ -2.71
HSPG2P98160 MIR548S-201ENST00000581352 82 ntBASIC-1.86□□□□□ -2.71
HSPG2P98160 RNU6-829P-201ENST00000363700 112 ntBASIC-1.87□□□□□ -2.71
HSPG2P98160 RNU6-620P-201ENST00000384017 96 ntBASIC-1.87□□□□□ -2.71
HSPG2P98160 AC026407.1-201ENST00000518369 204 ntBASIC-1.88□□□□□ -2.71
HSPG2P98160 RNU6-147P-201ENST00000383983 107 ntBASIC-1.88□□□□□ -2.71
HSPG2P98160 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.88□□□□□ -2.71
HSPG2P98160 RNU6-81P-201ENST00000365608 104 ntBASIC-1.89□□□□□ -2.71
HSPG2P98160 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.89□□□□□ -2.71
HSPG2P98160 MIR494-201ENST00000349529 81 ntBASIC-1.9□□□□□ -2.71
HSPG2P98160 MIR3908-201ENST00000579798 126 ntBASIC-1.9□□□□□ -2.71
HSPG2P98160 RNU6-294P-201ENST00000364999 102 ntBASIC-1.91□□□□□ -2.71
HSPG2P98160 RNU6-753P-201ENST00000363926 107 ntBASIC-1.91□□□□□ -2.72
HSPG2P98160 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.91□□□□□ -2.72
HSPG2P98160 SNORA26.2-201ENST00000390922 122 ntBASIC-1.91□□□□□ -2.72
HSPG2P98160 AL365222.1-201ENST00000614661 98 ntBASIC-1.91□□□□□ -2.72
HSPG2P98160 RNU6-313P-201ENST00000516317 112 ntBASIC-1.93□□□□□ -2.72
HSPG2P98160 MIR3202-2-201ENST00000635980 79 ntBASIC-1.93□□□□□ -2.72
HSPG2P98160 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.94□□□□□ -2.72
HSPG2P98160 MIR1255A-201ENST00000408338 113 ntBASIC-1.94□□□□□ -2.72
HSPG2P98160 RNU6-930P-201ENST00000390938 100 ntBASIC-1.94□□□□□ -2.72
HSPG2P98160 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.96□□□□□ -2.72
HSPG2P98160 RNU6-894P-201ENST00000517094 105 ntBASIC-1.96□□□□□ -2.72
HSPG2P98160 MIR4503-201ENST00000582187 83 ntBASIC-1.96□□□□□ -2.72
HSPG2P98160 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.96□□□□□ -2.72
HSPG2P98160 RNY4P30-201ENST00000410216 95 ntBASIC-1.96□□□□□ -2.72
HSPG2P98160 RNU6-919P-201ENST00000516731 104 ntBASIC-1.97□□□□□ -2.72
HSPG2P98160 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.97□□□□□ -2.72
HSPG2P98160 RNU6-279P-201ENST00000391297 101 ntBASIC-1.97□□□□□ -2.73
HSPG2P98160 SNORD111B-201ENST00000408587 80 ntBASIC-1.97□□□□□ -2.73
HSPG2P98160 RNU6-327P-201ENST00000516270 127 ntBASIC-1.99□□□□□ -2.73
HSPG2P98160 MIR450A2-201ENST00000385022 100 ntBASIC-1.99□□□□□ -2.73
HSPG2P98160 MIR548F3-201ENST00000408509 87 ntBASIC-1.99□□□□□ -2.73
HSPG2P98160 RNU6-857P-201ENST00000515893 110 ntBASIC-1.99□□□□□ -2.73
HSPG2P98160 U6.103-201ENST00000637085 61 ntBASIC-2□□□□□ -2.73
HSPG2P98160 RNU6-936P-201ENST00000384005 107 ntBASIC-2□□□□□ -2.73
HSPG2P98160 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.01□□□□□ -2.73
HSPG2P98160 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.01□□□□□ -2.73
HSPG2P98160 AC079150.2-201ENST00000443733 78 ntBASIC-2.01□□□□□ -2.73
HSPG2P98160 RNU6-499P-201ENST00000365615 107 ntBASIC-2.01□□□□□ -2.73
HSPG2P98160 MIR4662A-201ENST00000637499 67 ntBASIC-2.01□□□□□ -2.73
HSPG2P98160 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.01□□□□□ -2.73
HSPG2P98160 RNU6-485P-201ENST00000363475 107 ntBASIC-2.02□□□□□ -2.73
HSPG2P98160 RNU6-406P-201ENST00000516470 107 ntBASIC-2.02□□□□□ -2.73
HSPG2P98160 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.02□□□□□ -2.73
HSPG2P98160 RNU6-215P-201ENST00000365169 102 ntBASIC-2.03□□□□□ -2.73
HSPG2P98160 RNA5SP89-201ENST00000410300 108 ntBASIC-2.03□□□□□ -2.73
HSPG2P98160 RNU6-133P-201ENST00000383989 107 ntBASIC-2.04□□□□□ -2.74
HSPG2P98160 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.05□□□□□ -2.74
HSPG2P98160 SNORD78.1-201ENST00000390866 65 ntBASIC-2.06□□□□□ -2.74
HSPG2P98160 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.06□□□□□ -2.74
HSPG2P98160 DLEU2_4.2-201ENST00000616613 58 ntBASIC-2.06□□□□□ -2.74
HSPG2P98160 RNU6-573P-201ENST00000383938 106 ntBASIC-2.07□□□□□ -2.74
HSPG2P98160 RNU6-44P-201ENST00000384045 107 ntBASIC-2.07□□□□□ -2.74
HSPG2P98160 RNU6-153P-201ENST00000364422 104 ntBASIC-2.07□□□□□ -2.74
HSPG2P98160 SNORD20-201ENST00000384550 80 ntBASIC-2.07□□□□□ -2.74
HSPG2P98160 MIR3133-201ENST00000583157 78 ntBASIC-2.08□□□□□ -2.74
HSPG2P98160 MIR3671-201ENST00000580455 88 ntBASIC-2.09□□□□□ -2.74
HSPG2P98160 MIR5582-201ENST00000579697 68 ntBASIC-2.09□□□□□ -2.74
HSPG2P98160 RNU6-794P-201ENST00000517261 64 ntBASIC-2.1□□□□□ -2.74
HSPG2P98160 MIR633-201ENST00000384821 98 ntBASIC-2.12□□□□□ -2.75
HSPG2P98160 RNU6-614P-201ENST00000384369 107 ntBASIC-2.14□□□□□ -2.75
HSPG2P98160 U6.59-201ENST00000615686 107 ntBASIC-2.14□□□□□ -2.75
HSPG2P98160 MIR548M-201ENST00000408260 86 ntBASIC-2.14□□□□□ -2.75
HSPG2P98160 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.17□□□□□ -2.76
HSPG2P98160 RNY4P19-201ENST00000362530 96 ntBASIC-2.17□□□□□ -2.76
HSPG2P98160 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.17□□□□□ -2.76
HSPG2P98160 RNA5SP225-201ENST00000410874 135 ntBASIC-2.17□□□□□ -2.76
HSPG2P98160 MIR3910-1-201ENST00000580936 111 ntBASIC-2.17□□□□□ -2.76
HSPG2P98160 RNU6-892P-201ENST00000410335 99 ntBASIC-2.18□□□□□ -2.76
HSPG2P98160 RNY4P29-201ENST00000410801 97 ntBASIC-2.19□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms