Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-620P-201ENST00000384017 96 ntBASIC-3.15□□□□□ -2.91
PRKDCP78527 RNU6-787P-201ENST00000384032 107 ntBASIC-3.15□□□□□ -2.91
PRKDCP78527 RNY1P5-201ENST00000383890 115 ntBASIC-3.16□□□□□ -2.92
PRKDCP78527 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.17□□□□□ -2.92
PRKDCP78527 RNU6-346P-201ENST00000516288 111 ntBASIC-3.17□□□□□ -2.92
PRKDCP78527 MIR606-201ENST00000384851 96 ntBASIC-3.18□□□□□ -2.92
PRKDCP78527 MIR568-201ENST00000385036 95 ntBASIC-3.19□□□□□ -2.92
PRKDCP78527 RNU6-820P-201ENST00000384273 107 ntBASIC-3.19□□□□□ -2.92
PRKDCP78527 RNU6-471P-201ENST00000383944 106 ntBASIC-3.19□□□□□ -2.92
PRKDCP78527 RNU6-463P-201ENST00000384340 107 ntBASIC-3.2□□□□□ -2.92
PRKDCP78527 MT-TG-201ENST00000387429 68 ntBASIC-3.21□□□□□ -2.92
PRKDCP78527 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.21□□□□□ -2.92
PRKDCP78527 RNU6-22P-201ENST00000384355 107 ntBASIC-3.22□□□□□ -2.92
PRKDCP78527 AP000770.2-201ENST00000623694 100 ntBASIC-3.22□□□□□ -2.92
PRKDCP78527 SNORD116-14-201ENST00000383894 92 ntBASIC-3.23□□□□□ -2.93
PRKDCP78527 SNORD116-17-201ENST00000383929 92 ntBASIC-3.23□□□□□ -2.93
PRKDCP78527 SNORD116-15-201ENST00000384445 92 ntBASIC-3.23□□□□□ -2.93
PRKDCP78527 SNORD116-19-201ENST00000384729 92 ntBASIC-3.23□□□□□ -2.93
PRKDCP78527 RNU6-388P-201ENST00000517012 105 ntBASIC-3.24□□□□□ -2.93
PRKDCP78527 RNU6-389P-201ENST00000517048 105 ntBASIC-3.24□□□□□ -2.93
PRKDCP78527 RNU6-49P-201ENST00000384256 107 ntBASIC-3.25□□□□□ -2.93
PRKDCP78527 MIR5588-201ENST00000581890 63 ntBASIC-3.25□□□□□ -2.93
PRKDCP78527 RNU6-81P-201ENST00000365608 104 ntBASIC-3.25□□□□□ -2.93
PRKDCP78527 AC026407.1-201ENST00000518369 204 ntBASIC-3.26□□□□□ -2.93
PRKDCP78527 SNORA26.2-201ENST00000390922 122 ntBASIC-3.27□□□□□ -2.93
PRKDCP78527 RNY4P30-201ENST00000410216 95 ntBASIC-3.27□□□□□ -2.93
PRKDCP78527 RNU6-886P-201ENST00000384319 105 ntBASIC-3.28□□□□□ -2.93
PRKDCP78527 RNU6-753P-201ENST00000363926 107 ntBASIC-3.28□□□□□ -2.93
PRKDCP78527 MIR3908-201ENST00000579798 126 ntBASIC-3.29□□□□□ -2.94
PRKDCP78527 MIR548S-201ENST00000581352 82 ntBASIC-3.29□□□□□ -2.94
PRKDCP78527 RNU6-59P-201ENST00000384787 107 ntBASIC-3.29□□□□□ -2.94
PRKDCP78527 RNU6-294P-201ENST00000364999 102 ntBASIC-3.3□□□□□ -2.94
PRKDCP78527 MIR1255A-201ENST00000408338 113 ntBASIC-3.3□□□□□ -2.94
PRKDCP78527 U6.111-201ENST00000636093 83 ntBASIC-3.31□□□□□ -2.94
PRKDCP78527 RNY4P19-201ENST00000362530 96 ntBASIC-3.32□□□□□ -2.94
PRKDCP78527 Y_RNA.464-201ENST00000384282 110 ntBASIC-3.32□□□□□ -2.94
PRKDCP78527 RNU6-1212P-201ENST00000517023 104 ntBASIC-3.32□□□□□ -2.94
PRKDCP78527 MIR488-201ENST00000365739 83 ntBASIC-3.32□□□□□ -2.94
PRKDCP78527 RNU6-829P-201ENST00000363700 112 ntBASIC-3.33□□□□□ -2.94
PRKDCP78527 MTCYBP6-201ENST00000441810 138 ntBASIC-3.33□□□□□ -2.94
PRKDCP78527 RNU6-446P-201ENST00000362827 106 ntBASIC-3.34□□□□□ -2.94
PRKDCP78527 SNORD113-4-201ENST00000364802 75 ntBASIC-3.34□□□□□ -2.94
PRKDCP78527 RNU6-1091P-201ENST00000363945 107 ntBASIC-3.34□□□□□ -2.94
PRKDCP78527 RNU6-147P-201ENST00000383983 107 ntBASIC-3.35□□□□□ -2.95
PRKDCP78527 MIR3202-2-201ENST00000635980 79 ntBASIC-3.35□□□□□ -2.95
PRKDCP78527 RNU6-640P-201ENST00000363693 105 ntBASIC-3.36□□□□□ -2.95
PRKDCP78527 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.37□□□□□ -2.95
PRKDCP78527 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.39□□□□□ -2.95
PRKDCP78527 RNU6-313P-201ENST00000516317 112 ntBASIC-3.39□□□□□ -2.95
PRKDCP78527 U6.103-201ENST00000637085 61 ntBASIC-3.4□□□□□ -2.95
PRKDCP78527 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.4□□□□□ -2.95
PRKDCP78527 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.41□□□□□ -2.95
PRKDCP78527 RNU6-894P-201ENST00000517094 105 ntBASIC-3.42□□□□□ -2.96
PRKDCP78527 AL365222.1-201ENST00000614661 98 ntBASIC-3.43□□□□□ -2.96
PRKDCP78527 MIR4662A-201ENST00000637499 67 ntBASIC-3.44□□□□□ -2.96
PRKDCP78527 RNU6-930P-201ENST00000390938 100 ntBASIC-3.45□□□□□ -2.96
PRKDCP78527 RNU6-153P-201ENST00000364422 104 ntBASIC-3.45□□□□□ -2.96
PRKDCP78527 RNU6-499P-201ENST00000365615 107 ntBASIC-3.45□□□□□ -2.96
PRKDCP78527 SNORD111B-201ENST00000408587 80 ntBASIC-3.47□□□□□ -2.96
PRKDCP78527 RNU6-919P-201ENST00000516731 104 ntBASIC-3.48□□□□□ -2.97
PRKDCP78527 MIR450A2-201ENST00000385022 100 ntBASIC-3.48□□□□□ -2.97
PRKDCP78527 RNU6-936P-201ENST00000384005 107 ntBASIC-3.48□□□□□ -2.97
PRKDCP78527 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.49□□□□□ -2.97
PRKDCP78527 RNU6-892P-201ENST00000410335 99 ntBASIC-3.49□□□□□ -2.97
PRKDCP78527 RNU6-327P-201ENST00000516270 127 ntBASIC-3.49□□□□□ -2.97
PRKDCP78527 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.5□□□□□ -2.97
PRKDCP78527 MIR4503-201ENST00000582187 83 ntBASIC-3.51□□□□□ -2.97
PRKDCP78527 RNU6-279P-201ENST00000391297 101 ntBASIC-3.52□□□□□ -2.97
PRKDCP78527 RNU6-133P-201ENST00000383989 107 ntBASIC-3.52□□□□□ -2.97
PRKDCP78527 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.55□□□□□ -2.98
PRKDCP78527 Y_RNA.703-201ENST00000516846 111 ntBASIC-3.55□□□□□ -2.98
PRKDCP78527 Y_RNA.261-201ENST00000364631 102 ntBASIC-3.56□□□□□ -2.98
PRKDCP78527 RNU6-485P-201ENST00000363475 107 ntBASIC-3.57□□□□□ -2.98
PRKDCP78527 MIR548F3-201ENST00000408509 87 ntBASIC-3.57□□□□□ -2.98
PRKDCP78527 RNU6-857P-201ENST00000515893 110 ntBASIC-3.57□□□□□ -2.98
PRKDCP78527 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.59□□□□□ -2.98
PRKDCP78527 SNORD78.1-201ENST00000390866 65 ntBASIC-3.6□□□□□ -2.99
PRKDCP78527 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.61□□□□□ -2.99
PRKDCP78527 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.61□□□□□ -2.99
PRKDCP78527 RNA5SP89-201ENST00000410300 108 ntBASIC-3.61□□□□□ -2.99
PRKDCP78527 SNORD20-201ENST00000384550 80 ntBASIC-3.62□□□□□ -2.99
PRKDCP78527 AC079150.2-201ENST00000443733 78 ntBASIC-3.64□□□□□ -2.99
PRKDCP78527 RNU6-44P-201ENST00000384045 107 ntBASIC-3.65□□□□□ -2.99
PRKDCP78527 RNU6-215P-201ENST00000365169 102 ntBASIC-3.67□□□□□ -3
PRKDCP78527 RNU6-406P-201ENST00000516470 107 ntBASIC-3.67□□□□□ -3
PRKDCP78527 MIR3671-201ENST00000580455 88 ntBASIC-3.67□□□□□ -3
PRKDCP78527 MIR5582-201ENST00000579697 68 ntBASIC-3.68□□□□□ -3
PRKDCP78527 RNU6-1045P-201ENST00000516321 107 ntBASIC-3.69□□□□□ -3
PRKDCP78527 MIR548M-201ENST00000408260 86 ntBASIC-3.69□□□□□ -3
PRKDCP78527 RNU6-614P-201ENST00000384369 107 ntBASIC-3.7□□□□□ -3
PRKDCP78527 U6.59-201ENST00000615686 107 ntBASIC-3.7□□□□□ -3
PRKDCP78527 RNU6-573P-201ENST00000383938 106 ntBASIC-3.71□□□□□ -3
PRKDCP78527 MIR3133-201ENST00000583157 78 ntBASIC-3.72□□□□□ -3
PRKDCP78527 AC125388.1-201ENST00000459631 156 ntBASIC-3.73□□□□□ -3.01
PRKDCP78527 MIR633-201ENST00000384821 98 ntBASIC-3.74□□□□□ -3.01
PRKDCP78527 RNU6-794P-201ENST00000517261 64 ntBASIC-3.79□□□□□ -3.02
PRKDCP78527 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.82□□□□□ -3.02
PRKDCP78527 RNY4P29-201ENST00000410801 97 ntBASIC-3.83□□□□□ -3.02
PRKDCP78527 AL606753.1-201ENST00000427435 87 ntBASIC-3.83□□□□□ -3.02
PRKDCP78527 RNA5SP225-201ENST00000410874 135 ntBASIC-3.84□□□□□ -3.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms