Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNU7-120P-201ENST00000459334 63 ntBASIC-7.77□□□□□ -3.65
VCANP13611 RNU6-1117P-201ENST00000384525 104 ntBASIC-7.77□□□□□ -3.65
VCANP13611 RNU6-751P-201ENST00000516382 101 ntBASIC-7.77□□□□□ -3.65
VCANP13611 RNU6-111P-201ENST00000517179 105 ntBASIC-7.77□□□□□ -3.65
VCANP13611 SNORD19B-201ENST00000459623 84 ntBASIC-7.78□□□□□ -3.65
VCANP13611 RNU6-635P-201ENST00000516651 102 ntBASIC-7.81□□□□□ -3.66
VCANP13611 Y_RNA.297-201ENST00000364950 91 ntBASIC-7.82□□□□□ -3.66
VCANP13611 RNU6-573P-201ENST00000383938 106 ntBASIC-7.83□□□□□ -3.66
VCANP13611 MIR3128-201ENST00000581957 66 ntBASIC-7.85□□□□□ -3.67
VCANP13611 Y_RNA.553-201ENST00000384670 102 ntBASIC-7.86□□□□□ -3.67
VCANP13611 RNU6-956P-201ENST00000458868 103 ntBASIC-7.87□□□□□ -3.67
VCANP13611 RNU6-985P-201ENST00000410182 104 ntBASIC-7.88□□□□□ -3.67
VCANP13611 Y_RNA.554-201ENST00000384672 102 ntBASIC-7.88□□□□□ -3.67
VCANP13611 AC006362.1-201ENST00000567392 174 ntBASIC-7.9□□□□□ -3.67
VCANP13611 Y_RNA.460-201ENST00000384255 102 ntBASIC-7.9□□□□□ -3.67
VCANP13611 RNA5SP225-201ENST00000410874 135 ntBASIC-7.93□□□□□ -3.68
VCANP13611 RNU6-875P-201ENST00000516488 106 ntBASIC-7.93□□□□□ -3.68
VCANP13611 SNORD78.1-201ENST00000390866 65 ntBASIC-7.94□□□□□ -3.68
VCANP13611 SNORA20.1-201ENST00000364790 130 ntBASIC-7.98□□□□□ -3.69
VCANP13611 RNU6-506P-201ENST00000516553 94 ntBASIC-7.99□□□□□ -3.69
VCANP13611 RNU6-1023P-201ENST00000516137 106 ntBASIC-7.99□□□□□ -3.69
VCANP13611 RNU6-1137P-201ENST00000517073 99 ntBASIC-8□□□□□ -3.69
VCANP13611 AL117351.2-201ENST00000513571 157 ntBASIC-8□□□□□ -3.69
VCANP13611 RNU7-200P-201ENST00000516105 62 ntBASIC-8□□□□□ -3.69
VCANP13611 Y_RNA.350-201ENST00000365409 98 ntBASIC-8.02□□□□□ -3.69
VCANP13611 AC009094.1-201ENST00000564443 426 ntBASIC-8.04□□□□□ -3.7
VCANP13611 MIR3688-2-201ENST00000636963 87 ntBASIC-8.06□□□□□ -3.7
VCANP13611 Y_RNA.261-201ENST00000364631 102 ntBASIC-8.08□□□□□ -3.7
VCANP13611 Y_RNA.160-201ENST00000363677 92 ntBASIC-8.09□□□□□ -3.7
VCANP13611 Y_RNA.574-201ENST00000384766 95 ntBASIC-8.09□□□□□ -3.7
VCANP13611 MIR1302-1-201ENST00000637932 143 ntBASIC-8.09□□□□□ -3.7
VCANP13611 SNORD42.2-201ENST00000365570 69 ntBASIC-8.1□□□□□ -3.71
VCANP13611 RNA5SP89-201ENST00000410300 108 ntBASIC-8.14□□□□□ -3.71
VCANP13611 Y_RNA.506-201ENST00000384494 102 ntBASIC-8.14□□□□□ -3.71
VCANP13611 RNU6-346P-201ENST00000516288 111 ntBASIC-8.15□□□□□ -3.71
VCANP13611 RNU6-1168P-201ENST00000390831 104 ntBASIC-8.15□□□□□ -3.71
VCANP13611 MIR548F4-201ENST00000408515 105 ntBASIC-8.15□□□□□ -3.71
VCANP13611 AC069439.1-201ENST00000494739 167 ntBASIC-8.16□□□□□ -3.72
VCANP13611 RNY3P1-201ENST00000365085 102 ntBASIC-8.2□□□□□ -3.72
VCANP13611 MIR1277-201ENST00000408536 78 ntBASIC-8.22□□□□□ -3.72
VCANP13611 AL365222.1-201ENST00000614661 98 ntBASIC-8.23□□□□□ -3.73
VCANP13611 Y_RNA.694-201ENST00000516677 117 ntBASIC-8.25□□□□□ -3.73
VCANP13611 RNU6-474P-201ENST00000384243 107 ntBASIC-8.28□□□□□ -3.74
VCANP13611 SNORD11.1-201ENST00000459482 85 ntBASIC-8.32□□□□□ -3.74
VCANP13611 RNY1P5-201ENST00000383890 115 ntBASIC-8.33□□□□□ -3.74
VCANP13611 MIR3908-201ENST00000579798 126 ntBASIC-8.34□□□□□ -3.74
VCANP13611 Y_RNA.369-201ENST00000365568 117 ntBASIC-8.34□□□□□ -3.74
VCANP13611 AC134503.1-201ENST00000633048 54 ntBASIC-8.34□□□□□ -3.74
VCANP13611 U4.5-201ENST00000617137 123 ntBASIC-8.35□□□□□ -3.75
VCANP13611 RNU6-718P-201ENST00000516166 105 ntBASIC-8.36□□□□□ -3.75
VCANP13611 Y_RNA.388-201ENST00000383919 113 ntBASIC-8.37□□□□□ -3.75
VCANP13611 MTATP8P1-201ENST00000467115 207 ntBASIC-8.37□□□□□ -3.75
VCANP13611 AC062037.2-201ENST00000610137 73 ntBASIC-8.38□□□□□ -3.75
VCANP13611 RNU6-886P-201ENST00000384319 105 ntBASIC-8.39□□□□□ -3.75
VCANP13611 RNU6-22P-201ENST00000384355 107 ntBASIC-8.39□□□□□ -3.75
VCANP13611 MIR5582-201ENST00000579697 68 ntBASIC-8.4□□□□□ -3.75
VCANP13611 Y_RNA.685-201ENST00000516532 108 ntBASIC-8.42□□□□□ -3.76
VCANP13611 RNU6-1212P-201ENST00000517023 104 ntBASIC-8.47□□□□□ -3.76
VCANP13611 AP001094.1-201ENST00000579805 193 ntBASIC-8.47□□□□□ -3.77
VCANP13611 RNU6-919P-201ENST00000516731 104 ntBASIC-8.47□□□□□ -3.77
VCANP13611 SNORD73B-201ENST00000364394 72 ntBASIC-8.49□□□□□ -3.77
VCANP13611 MIR3171-201ENST00000584270 74 ntBASIC-8.5□□□□□ -3.77
VCANP13611 RNU4-37P-201ENST00000410214 84 ntBASIC-8.51□□□□□ -3.77
VCANP13611 RNY4P29-201ENST00000410801 97 ntBASIC-8.52□□□□□ -3.77
VCANP13611 Y_RNA.489-201ENST00000384410 101 ntBASIC-8.53□□□□□ -3.77
VCANP13611 RNU2-16P-201ENST00000410712 136 ntBASIC-8.53□□□□□ -3.77
VCANP13611 Y_RNA.216-201ENST00000364205 93 ntBASIC-8.54□□□□□ -3.78
VCANP13611 RNU6-1154P-201ENST00000391001 104 ntBASIC-8.57□□□□□ -3.78
VCANP13611 Y_RNA.138-201ENST00000363462 102 ntBASIC-8.59□□□□□ -3.78
VCANP13611 Y_RNA.464-201ENST00000384282 110 ntBASIC-8.62□□□□□ -3.79
VCANP13611 RNU6-313P-201ENST00000516317 112 ntBASIC-8.66□□□□□ -3.8
VCANP13611 SNORD20-201ENST00000384550 80 ntBASIC-8.68□□□□□ -3.8
VCANP13611 Y_RNA.149-201ENST00000363558 117 ntBASIC-8.7□□□□□ -3.8
VCANP13611 RNU6-44P-201ENST00000384045 107 ntBASIC-8.73□□□□□ -3.81
VCANP13611 RNU6-215P-201ENST00000365169 102 ntBASIC-8.76□□□□□ -3.81
VCANP13611 Y_RNA.193-201ENST00000363979 102 ntBASIC-8.77□□□□□ -3.81
VCANP13611 Y_RNA.318-201ENST00000365131 97 ntBASIC-8.78□□□□□ -3.82
VCANP13611 MIR4795-201ENST00000584182 89 ntBASIC-8.79□□□□□ -3.82
VCANP13611 AC008737.2-201ENST00000599446 118 ntBASIC-8.81□□□□□ -3.82
VCANP13611 MTCYBP9-201ENST00000431021 303 ntBASIC-8.84□□□□□ -3.83
VCANP13611 RNU6-388P-201ENST00000517012 105 ntBASIC-8.86□□□□□ -3.83
VCANP13611 RNU6-389P-201ENST00000517048 105 ntBASIC-8.86□□□□□ -3.83
VCANP13611 MIR1302-4-201ENST00000408701 150 ntBASIC-8.88□□□□□ -3.83
VCANP13611 MIR568-201ENST00000385036 95 ntBASIC-8.93□□□□□ -3.84
VCANP13611 MIR4719-201ENST00000585233 84 ntBASIC-8.94□□□□□ -3.84
VCANP13611 RNU6-1160P-201ENST00000384546 104 ntBASIC-8.95□□□□□ -3.84
VCANP13611 MT-TD-201ENST00000387419 68 ntBASIC-8.96□□□□□ -3.84
VCANP13611 Y_RNA.703-201ENST00000516846 111 ntBASIC-8.98□□□□□ -3.85
VCANP13611 RNU6-584P-201ENST00000410350 95 ntBASIC-8.98□□□□□ -3.85
VCANP13611 MTATP6P25-201ENST00000574491 261 ntBASIC-9.04□□□□□ -3.86
VCANP13611 MIR3133-201ENST00000583157 78 ntBASIC-9.05□□□□□ -3.86
VCANP13611 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-9.1□□□□□ -3.87
VCANP13611 MIR620-201ENST00000385232 95 ntBASIC-9.14□□□□□ -3.87
VCANP13611 MIR3974-201ENST00000637126 96 ntBASIC-9.21□□□□□ -3.88
VCANP13611 MIR606-201ENST00000384851 96 ntBASIC-9.21□□□□□ -3.88
VCANP13611 MT-TG-201ENST00000387429 68 ntBASIC-9.26□□□□□ -3.89
VCANP13611 Y_RNA.717-201ENST00000517106 92 ntBASIC-9.27□□□□□ -3.89
VCANP13611 MIR4503-201ENST00000582187 83 ntBASIC-9.3□□□□□ -3.9
VCANP13611 MTCYBP6-201ENST00000441810 138 ntBASIC-9.32□□□□□ -3.9
VCANP13611 RNA5SP170-201ENST00000517150 101 ntBASIC-9.36□□□□□ -3.91
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms