Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC139453.2-201ENST00000487255 133 ntBASIC-2.21□□□□□ -2.76
HLA-DQA1P01909 MIR4662A-201ENST00000637499 67 ntBASIC-2.21□□□□□ -2.76
HLA-DQA1P01909 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.23□□□□□ -2.77
HLA-DQA1P01909 AC114801.3-201ENST00000510231 177 ntBASIC-2.23□□□□□ -2.77
HLA-DQA1P01909 RNU6-829P-201ENST00000363700 112 ntBASIC-2.24□□□□□ -2.77
HLA-DQA1P01909 RNU4-33P-201ENST00000364316 85 ntBASIC-2.24□□□□□ -2.77
HLA-DQA1P01909 MIR633-201ENST00000384821 98 ntBASIC-2.24□□□□□ -2.77
HLA-DQA1P01909 RNU6-822P-201ENST00000362707 106 ntBASIC-2.25□□□□□ -2.77
HLA-DQA1P01909 RNU6-119P-201ENST00000364882 107 ntBASIC-2.25□□□□□ -2.77
HLA-DQA1P01909 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.25□□□□□ -2.77
HLA-DQA1P01909 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.25□□□□□ -2.77
HLA-DQA1P01909 MIR4317-201ENST00000637586 65 ntBASIC-2.25□□□□□ -2.77
HLA-DQA1P01909 RNA5SP224-201ENST00000365069 126 ntBASIC-2.26□□□□□ -2.77
HLA-DQA1P01909 MIR5693-201ENST00000577722 73 ntBASIC-2.27□□□□□ -2.77
HLA-DQA1P01909 MIR548AL-201ENST00000578416 97 ntBASIC-2.27□□□□□ -2.77
HLA-DQA1P01909 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.28□□□□□ -2.77
HLA-DQA1P01909 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.28□□□□□ -2.77
HLA-DQA1P01909 RNU6-230P-201ENST00000362457 104 ntBASIC-2.29□□□□□ -2.78
HLA-DQA1P01909 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.29□□□□□ -2.78
HLA-DQA1P01909 RNU6-854P-201ENST00000364036 107 ntBASIC-2.3□□□□□ -2.78
HLA-DQA1P01909 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.3□□□□□ -2.78
HLA-DQA1P01909 SNORD115.2-201ENST00000391126 59 ntBASIC-2.3□□□□□ -2.78
HLA-DQA1P01909 SNORD45C-201ENST00000383893 79 ntBASIC-2.32□□□□□ -2.78
HLA-DQA1P01909 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.32□□□□□ -2.78
HLA-DQA1P01909 MIR656-201ENST00000385224 78 ntBASIC-2.32□□□□□ -2.78
HLA-DQA1P01909 MIR1302-4-201ENST00000408701 150 ntBASIC-2.33□□□□□ -2.78
HLA-DQA1P01909 RNY4P25-201ENST00000459254 96 ntBASIC-2.33□□□□□ -2.78
HLA-DQA1P01909 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.34□□□□□ -2.78
HLA-DQA1P01909 RNU6-836P-201ENST00000362920 107 ntBASIC-2.34□□□□□ -2.78
HLA-DQA1P01909 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.34□□□□□ -2.78
HLA-DQA1P01909 RNU6-737P-201ENST00000365370 107 ntBASIC-2.34□□□□□ -2.78
HLA-DQA1P01909 Y_RNA.685-201ENST00000516532 108 ntBASIC-2.34□□□□□ -2.78
HLA-DQA1P01909 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.35□□□□□ -2.79
HLA-DQA1P01909 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.37□□□□□ -2.79
HLA-DQA1P01909 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.37□□□□□ -2.79
HLA-DQA1P01909 SNORD54-201ENST00000459159 67 ntBASIC-2.39□□□□□ -2.79
HLA-DQA1P01909 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.39□□□□□ -2.79
HLA-DQA1P01909 AC079150.2-201ENST00000443733 78 ntBASIC-2.4□□□□□ -2.79
HLA-DQA1P01909 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.41□□□□□ -2.8
HLA-DQA1P01909 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.41□□□□□ -2.8
HLA-DQA1P01909 RNU6-808P-201ENST00000391233 108 ntBASIC-2.41□□□□□ -2.8
HLA-DQA1P01909 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.41□□□□□ -2.8
HLA-DQA1P01909 AL359920.1-201ENST00000618332 176 ntBASIC-2.41□□□□□ -2.8
HLA-DQA1P01909 RNA5SP93-201ENST00000362525 114 ntBASIC-2.42□□□□□ -2.8
HLA-DQA1P01909 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.42□□□□□ -2.8
HLA-DQA1P01909 RNU6-986P-201ENST00000363133 102 ntBASIC-2.43□□□□□ -2.8
HLA-DQA1P01909 RNU6-838P-201ENST00000363399 108 ntBASIC-2.43□□□□□ -2.8
HLA-DQA1P01909 MIR124-1-201ENST00000385275 85 ntBASIC-2.44□□□□□ -2.8
HLA-DQA1P01909 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-2.44□□□□□ -2.8
HLA-DQA1P01909 RNU6-788P-201ENST00000390967 104 ntBASIC-2.44□□□□□ -2.8
HLA-DQA1P01909 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.44□□□□□ -2.8
HLA-DQA1P01909 MIR545-201ENST00000385085 106 ntBASIC-2.45□□□□□ -2.8
HLA-DQA1P01909 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.47□□□□□ -2.8
HLA-DQA1P01909 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.47□□□□□ -2.8
HLA-DQA1P01909 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.47□□□□□ -2.8
HLA-DQA1P01909 SNORD115-45-201ENST00000391078 81 ntBASIC-2.48□□□□□ -2.81
HLA-DQA1P01909 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.48□□□□□ -2.81
HLA-DQA1P01909 RNU6-59P-201ENST00000384787 107 ntBASIC-2.49□□□□□ -2.81
HLA-DQA1P01909 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.5□□□□□ -2.81
HLA-DQA1P01909 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.51□□□□□ -2.81
HLA-DQA1P01909 RNU6-753P-201ENST00000363926 107 ntBASIC-2.52□□□□□ -2.81
HLA-DQA1P01909 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.52□□□□□ -2.81
HLA-DQA1P01909 AC125388.1-201ENST00000459631 156 ntBASIC-2.52□□□□□ -2.81
HLA-DQA1P01909 MIR548AH-201ENST00000637109 76 ntBASIC-2.52□□□□□ -2.81
HLA-DQA1P01909 SNORD114-13-201ENST00000364377 74 ntBASIC-2.53□□□□□ -2.81
HLA-DQA1P01909 RNU6-499P-201ENST00000365615 107 ntBASIC-2.56□□□□□ -2.82
HLA-DQA1P01909 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.57□□□□□ -2.82
HLA-DQA1P01909 RNY4P7-201ENST00000364600 96 ntBASIC-2.57□□□□□ -2.82
HLA-DQA1P01909 RNU6-936P-201ENST00000384005 107 ntBASIC-2.57□□□□□ -2.82
HLA-DQA1P01909 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.57□□□□□ -2.82
HLA-DQA1P01909 MIR548F3-201ENST00000408509 87 ntBASIC-2.57□□□□□ -2.82
HLA-DQA1P01909 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.61□□□□□ -2.83
HLA-DQA1P01909 RNU6-930P-201ENST00000390938 100 ntBASIC-2.62□□□□□ -2.83
HLA-DQA1P01909 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.65□□□□□ -2.83
HLA-DQA1P01909 RNU6-638P-201ENST00000516582 104 ntBASIC-2.65□□□□□ -2.83
HLA-DQA1P01909 RNU6-422P-201ENST00000384632 107 ntBASIC-2.67□□□□□ -2.84
HLA-DQA1P01909 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.71□□□□□ -2.84
HLA-DQA1P01909 MIR509-1-201ENST00000385265 94 ntBASIC-2.73□□□□□ -2.85
HLA-DQA1P01909 MIR509-2-201ENST00000390724 91 ntBASIC-2.73□□□□□ -2.85
HLA-DQA1P01909 RNU6-803P-201ENST00000516034 102 ntBASIC-2.73□□□□□ -2.85
HLA-DQA1P01909 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.74□□□□□ -2.85
HLA-DQA1P01909 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.76□□□□□ -2.85
HLA-DQA1P01909 RNU6-614P-201ENST00000384369 107 ntBASIC-2.78□□□□□ -2.85
HLA-DQA1P01909 U6.59-201ENST00000615686 107 ntBASIC-2.78□□□□□ -2.85
HLA-DQA1P01909 DLEU2_4.2-201ENST00000616613 58 ntBASIC-2.79□□□□□ -2.86
HLA-DQA1P01909 RNA5SP106-201ENST00000517274 100 ntBASIC-2.8□□□□□ -2.86
HLA-DQA1P01909 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.81□□□□□ -2.86
HLA-DQA1P01909 SNORA72.7-201ENST00000516349 94 ntBASIC-2.81□□□□□ -2.86
HLA-DQA1P01909 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.82□□□□□ -2.86
HLA-DQA1P01909 RNY4P10-201ENST00000365571 96 ntBASIC-2.82□□□□□ -2.86
HLA-DQA1P01909 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.82□□□□□ -2.86
HLA-DQA1P01909 SNORD111B-201ENST00000408587 80 ntBASIC-2.89□□□□□ -2.87
HLA-DQA1P01909 RNY4-201ENST00000516507 96 ntBASIC-2.89□□□□□ -2.87
HLA-DQA1P01909 RNU6-665P-201ENST00000384639 107 ntBASIC-2.9□□□□□ -2.87
HLA-DQA1P01909 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.91□□□□□ -2.88
HLA-DQA1P01909 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.92□□□□□ -2.88
HLA-DQA1P01909 RNU6-987P-201ENST00000384759 104 ntBASIC-2.93□□□□□ -2.88
HLA-DQA1P01909 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.98□□□□□ -2.89
HLA-DQA1P01909 MTND4LP19-201ENST00000403051 166 ntBASIC-3.01□□□□□ -2.89
HLA-DQA1P01909 RNA5SP449-201ENST00000516871 130 ntBASIC-3.01□□□□□ -2.89
Retrieved 100 of 98,524 protein–RNA pairs in 299.1 ms