Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-446P-201ENST00000362827 106 ntBASIC-3.57□□□□□ -2.98
SMKR1H3BMG3 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.57□□□□□ -2.98
SMKR1H3BMG3 AC139453.2-201ENST00000487255 133 ntBASIC-3.57□□□□□ -2.98
SMKR1H3BMG3 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.58□□□□□ -2.98
SMKR1H3BMG3 AL731768.1-201ENST00000603124 139 ntBASIC-3.58□□□□□ -2.98
SMKR1H3BMG3 AC114801.3-201ENST00000510231 177 ntBASIC-3.59□□□□□ -2.98
SMKR1H3BMG3 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.63□□□□□ -2.99
SMKR1H3BMG3 RNU4-33P-201ENST00000364316 85 ntBASIC-3.67□□□□□ -3
SMKR1H3BMG3 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.67□□□□□ -3
SMKR1H3BMG3 MIR548AL-201ENST00000578416 97 ntBASIC-3.67□□□□□ -3
SMKR1H3BMG3 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.68□□□□□ -3
SMKR1H3BMG3 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.68□□□□□ -3
SMKR1H3BMG3 MIR1302-4-201ENST00000408701 150 ntBASIC-3.68□□□□□ -3
SMKR1H3BMG3 RNU6-230P-201ENST00000362457 104 ntBASIC-3.69□□□□□ -3
SMKR1H3BMG3 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.7□□□□□ -3
SMKR1H3BMG3 RNA5SP224-201ENST00000365069 126 ntBASIC-3.71□□□□□ -3
SMKR1H3BMG3 MIR656-201ENST00000385224 78 ntBASIC-3.71□□□□□ -3
SMKR1H3BMG3 RNY4P25-201ENST00000459254 96 ntBASIC-3.71□□□□□ -3
SMKR1H3BMG3 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.72□□□□□ -3
SMKR1H3BMG3 MIR548H4-201ENST00000408689 111 ntBASIC-3.72□□□□□ -3
SMKR1H3BMG3 RNY4P7-201ENST00000364600 96 ntBASIC-3.73□□□□□ -3.01
SMKR1H3BMG3 SNORD113-4-201ENST00000364802 75 ntBASIC-3.73□□□□□ -3.01
SMKR1H3BMG3 SNORD115.2-201ENST00000391126 59 ntBASIC-3.73□□□□□ -3.01
SMKR1H3BMG3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-3.74□□□□□ -3.01
SMKR1H3BMG3 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.75□□□□□ -3.01
SMKR1H3BMG3 RNU6-836P-201ENST00000362920 107 ntBASIC-3.76□□□□□ -3.01
SMKR1H3BMG3 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.77□□□□□ -3.01
SMKR1H3BMG3 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.77□□□□□ -3.01
SMKR1H3BMG3 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.78□□□□□ -3.01
SMKR1H3BMG3 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.78□□□□□ -3.01
SMKR1H3BMG3 SNORD45C-201ENST00000383893 79 ntBASIC-3.78□□□□□ -3.01
SMKR1H3BMG3 MIR5693-201ENST00000577722 73 ntBASIC-3.78□□□□□ -3.01
SMKR1H3BMG3 RNU6-829P-201ENST00000363700 112 ntBASIC-3.8□□□□□ -3.02
SMKR1H3BMG3 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.8□□□□□ -3.02
SMKR1H3BMG3 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.8□□□□□ -3.02
SMKR1H3BMG3 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.81□□□□□ -3.02
SMKR1H3BMG3 MIR633-201ENST00000384821 98 ntBASIC-3.83□□□□□ -3.02
SMKR1H3BMG3 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.84□□□□□ -3.02
SMKR1H3BMG3 RNA5SP93-201ENST00000362525 114 ntBASIC-3.85□□□□□ -3.03
SMKR1H3BMG3 AL359920.1-201ENST00000618332 176 ntBASIC-3.86□□□□□ -3.03
SMKR1H3BMG3 RNU6-737P-201ENST00000365370 107 ntBASIC-3.88□□□□□ -3.03
SMKR1H3BMG3 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.88□□□□□ -3.03
SMKR1H3BMG3 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.89□□□□□ -3.03
SMKR1H3BMG3 RNU6-808P-201ENST00000391233 108 ntBASIC-3.89□□□□□ -3.03
SMKR1H3BMG3 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.92□□□□□ -3.04
SMKR1H3BMG3 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.93□□□□□ -3.04
SMKR1H3BMG3 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.94□□□□□ -3.04
SMKR1H3BMG3 RNU6-838P-201ENST00000363399 108 ntBASIC-3.95□□□□□ -3.04
SMKR1H3BMG3 RNU6-854P-201ENST00000364036 107 ntBASIC-3.97□□□□□ -3.04
SMKR1H3BMG3 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.98□□□□□ -3.05
SMKR1H3BMG3 AC079150.2-201ENST00000443733 78 ntBASIC-3.99□□□□□ -3.05
SMKR1H3BMG3 AC125388.1-201ENST00000459631 156 ntBASIC-3.99□□□□□ -3.05
SMKR1H3BMG3 Y_RNA.79-201ENST00000362992 113 ntBASIC-4□□□□□ -3.05
SMKR1H3BMG3 Y_RNA.421-201ENST00000384052 101 ntBASIC-4□□□□□ -3.05
SMKR1H3BMG3 RNU6-1275P-201ENST00000391087 107 ntBASIC-4.01□□□□□ -3.05
SMKR1H3BMG3 Y_RNA.379-201ENST00000365653 102 ntBASIC-4.02□□□□□ -3.05
SMKR1H3BMG3 RNU6-1044P-201ENST00000384755 107 ntBASIC-4.07□□□□□ -3.06
SMKR1H3BMG3 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.08□□□□□ -3.06
SMKR1H3BMG3 Y_RNA.186-201ENST00000363899 92 ntBASIC-4.09□□□□□ -3.06
SMKR1H3BMG3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-4.09□□□□□ -3.06
SMKR1H3BMG3 SNORD114-13-201ENST00000364377 74 ntBASIC-4.1□□□□□ -3.07
SMKR1H3BMG3 RNY4-201ENST00000516507 96 ntBASIC-4.12□□□□□ -3.07
SMKR1H3BMG3 RNU6-1191P-201ENST00000516799 107 ntBASIC-4.12□□□□□ -3.07
SMKR1H3BMG3 Y_RNA.204-201ENST00000364112 102 ntBASIC-4.13□□□□□ -3.07
SMKR1H3BMG3 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.13□□□□□ -3.07
SMKR1H3BMG3 RNU6-59P-201ENST00000384787 107 ntBASIC-4.14□□□□□ -3.07
SMKR1H3BMG3 RNU6-499P-201ENST00000365615 107 ntBASIC-4.15□□□□□ -3.07
SMKR1H3BMG3 RNU6-753P-201ENST00000363926 107 ntBASIC-4.16□□□□□ -3.08
SMKR1H3BMG3 Y_RNA.658-201ENST00000515990 97 ntBASIC-4.18□□□□□ -3.08
SMKR1H3BMG3 RNU6-788P-201ENST00000390967 104 ntBASIC-4.19□□□□□ -3.08
SMKR1H3BMG3 MIR545-201ENST00000385085 106 ntBASIC-4.2□□□□□ -3.08
SMKR1H3BMG3 MIR124-1-201ENST00000385275 85 ntBASIC-4.2□□□□□ -3.08
SMKR1H3BMG3 RNU6-986P-201ENST00000363133 102 ntBASIC-4.21□□□□□ -3.08
SMKR1H3BMG3 RNU6-422P-201ENST00000384632 107 ntBASIC-4.23□□□□□ -3.09
SMKR1H3BMG3 RNU6-936P-201ENST00000384005 107 ntBASIC-4.25□□□□□ -3.09
SMKR1H3BMG3 SNORD115-45-201ENST00000391078 81 ntBASIC-4.25□□□□□ -3.09
SMKR1H3BMG3 RNU6-930P-201ENST00000390938 100 ntBASIC-4.27□□□□□ -3.09
SMKR1H3BMG3 MIR548F3-201ENST00000408509 87 ntBASIC-4.32□□□□□ -3.1
SMKR1H3BMG3 RNU6-638P-201ENST00000516582 104 ntBASIC-4.34□□□□□ -3.1
SMKR1H3BMG3 MIR509-1-201ENST00000385265 94 ntBASIC-4.37□□□□□ -3.11
SMKR1H3BMG3 MIR509-2-201ENST00000390724 91 ntBASIC-4.37□□□□□ -3.11
SMKR1H3BMG3 MIR548AH-201ENST00000637109 76 ntBASIC-4.37□□□□□ -3.11
SMKR1H3BMG3 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.44□□□□□ -3.12
SMKR1H3BMG3 RNU6-803P-201ENST00000516034 102 ntBASIC-4.44□□□□□ -3.12
SMKR1H3BMG3 RNU6-614P-201ENST00000384369 107 ntBASIC-4.45□□□□□ -3.12
SMKR1H3BMG3 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.45□□□□□ -3.12
SMKR1H3BMG3 U6.59-201ENST00000615686 107 ntBASIC-4.45□□□□□ -3.12
SMKR1H3BMG3 SNORA72.7-201ENST00000516349 94 ntBASIC-4.46□□□□□ -3.12
SMKR1H3BMG3 RNU6-987P-201ENST00000384759 104 ntBASIC-4.57□□□□□ -3.14
SMKR1H3BMG3 RNA5SP106-201ENST00000517274 100 ntBASIC-4.59□□□□□ -3.14
SMKR1H3BMG3 DLEU2_4.2-201ENST00000616613 58 ntBASIC-4.59□□□□□ -3.14
SMKR1H3BMG3 RNY4P10-201ENST00000365571 96 ntBASIC-4.6□□□□□ -3.15
SMKR1H3BMG3 Y_RNA.511-201ENST00000384514 103 ntBASIC-4.6□□□□□ -3.15
SMKR1H3BMG3 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-4.6□□□□□ -3.15
SMKR1H3BMG3 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.62□□□□□ -3.15
SMKR1H3BMG3 Y_RNA.566-201ENST00000384735 101 ntBASIC-4.64□□□□□ -3.15
SMKR1H3BMG3 RNU6-1121P-201ENST00000516802 109 ntBASIC-4.66□□□□□ -3.16
SMKR1H3BMG3 RNU6-665P-201ENST00000384639 107 ntBASIC-4.77□□□□□ -3.17
SMKR1H3BMG3 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.81□□□□□ -3.18
SMKR1H3BMG3 SNORD111B-201ENST00000408587 80 ntBASIC-4.86□□□□□ -3.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms