Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.6□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 RNU6-68P-201ENST00000516576 104 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 RNA5SP93-201ENST00000362525 114 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 SNORA25.4-201ENST00000363666 124 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 SNORD30.1-201ENST00000391309 70 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 RNU6-231P-201ENST00000517122 103 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.63□□□□□ -2.67
FOXA2Q9Y261 SNORA25.5-201ENST00000363782 126 ntBASIC-1.63□□□□□ -2.67
FOXA2Q9Y261 RNU6-119P-201ENST00000364882 107 ntBASIC-1.63□□□□□ -2.67
FOXA2Q9Y261 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.63□□□□□ -2.67
FOXA2Q9Y261 RNU6-810P-201ENST00000364001 107 ntBASIC-1.64□□□□□ -2.67
FOXA2Q9Y261 RNU6-828P-201ENST00000364876 107 ntBASIC-1.64□□□□□ -2.67
FOXA2Q9Y261 RNU6-573P-201ENST00000383938 106 ntBASIC-1.64□□□□□ -2.67
FOXA2Q9Y261 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.64□□□□□ -2.67
FOXA2Q9Y261 SNORD116.2-201ENST00000391251 93 ntBASIC-1.64□□□□□ -2.67
FOXA2Q9Y261 RNU6-871P-201ENST00000516122 100 ntBASIC-1.64□□□□□ -2.67
FOXA2Q9Y261 MIR1255A-201ENST00000408338 113 ntBASIC-1.65□□□□□ -2.67
FOXA2Q9Y261 RNU6-857P-201ENST00000515893 110 ntBASIC-1.65□□□□□ -2.67
FOXA2Q9Y261 RNU6-122P-201ENST00000516818 107 ntBASIC-1.65□□□□□ -2.67
FOXA2Q9Y261 SNORD18C-201ENST00000362704 69 ntBASIC-1.66□□□□□ -2.68
FOXA2Q9Y261 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.66□□□□□ -2.68
FOXA2Q9Y261 SNORA26.2-201ENST00000390922 122 ntBASIC-1.66□□□□□ -2.68
FOXA2Q9Y261 RNY4P29-201ENST00000410801 97 ntBASIC-1.66□□□□□ -2.68
FOXA2Q9Y261 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.67□□□□□ -2.68
FOXA2Q9Y261 RNU6-279P-201ENST00000391297 101 ntBASIC-1.67□□□□□ -2.68
FOXA2Q9Y261 MIR548N-201ENST00000408742 75 ntBASIC-1.67□□□□□ -2.68
FOXA2Q9Y261 SNORD54-201ENST00000459159 67 ntBASIC-1.67□□□□□ -2.68
FOXA2Q9Y261 MIR202-201ENST00000362219 110 ntBASIC-1.68□□□□□ -2.68
FOXA2Q9Y261 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.68□□□□□ -2.68
FOXA2Q9Y261 RNU6-649P-201ENST00000384463 107 ntBASIC-1.68□□□□□ -2.68
FOXA2Q9Y261 RNU6-520P-201ENST00000384717 104 ntBASIC-1.69□□□□□ -2.68
FOXA2Q9Y261 RNU6-530P-201ENST00000391180 107 ntBASIC-1.69□□□□□ -2.68
FOXA2Q9Y261 RNU6-912P-201ENST00000363800 104 ntBASIC-1.7□□□□□ -2.68
FOXA2Q9Y261 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.7□□□□□ -2.68
FOXA2Q9Y261 SNORA40B-201ENST00000385573 128 ntBASIC-1.7□□□□□ -2.68
FOXA2Q9Y261 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.7□□□□□ -2.68
FOXA2Q9Y261 RNY4P9-201ENST00000363194 97 ntBASIC-1.71□□□□□ -2.68
FOXA2Q9Y261 RNU7-119P-201ENST00000459279 63 ntBASIC-1.71□□□□□ -2.68
FOXA2Q9Y261 MIR4511-201ENST00000582784 87 ntBASIC-1.71□□□□□ -2.68
FOXA2Q9Y261 U6.111-201ENST00000636093 83 ntBASIC-1.71□□□□□ -2.68
FOXA2Q9Y261 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 RNU6-539P-201ENST00000516665 103 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 AC103706.3-201ENST00000636297 85 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 RNU6-230P-201ENST00000362457 104 ntBASIC-1.73□□□□□ -2.69
FOXA2Q9Y261 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.73□□□□□ -2.69
FOXA2Q9Y261 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.73□□□□□ -2.69
FOXA2Q9Y261 RNU6-940P-201ENST00000363433 104 ntBASIC-1.74□□□□□ -2.69
FOXA2Q9Y261 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.74□□□□□ -2.69
FOXA2Q9Y261 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.74□□□□□ -2.69
FOXA2Q9Y261 MIR1207-201ENST00000408249 87 ntBASIC-1.74□□□□□ -2.69
FOXA2Q9Y261 SNORA40.16-201ENST00000517238 121 ntBASIC-1.74□□□□□ -2.69
FOXA2Q9Y261 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.74□□□□□ -2.69
FOXA2Q9Y261 SNORD78.1-201ENST00000390866 65 ntBASIC-1.75□□□□□ -2.69
FOXA2Q9Y261 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.75□□□□□ -2.69
FOXA2Q9Y261 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.76□□□□□ -2.69
FOXA2Q9Y261 SNORD60-201ENST00000383903 83 ntBASIC-1.76□□□□□ -2.69
FOXA2Q9Y261 MIR5693-201ENST00000577722 73 ntBASIC-1.76□□□□□ -2.69
FOXA2Q9Y261 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.77□□□□□ -2.69
FOXA2Q9Y261 RNU6-361P-201ENST00000364454 107 ntBASIC-1.77□□□□□ -2.69
FOXA2Q9Y261 SNORA17.4-201ENST00000391287 132 ntBASIC-1.77□□□□□ -2.69
FOXA2Q9Y261 MIR4723-201ENST00000585070 81 ntBASIC-1.77□□□□□ -2.69
FOXA2Q9Y261 MIR4679-1-201ENST00000637619 75 ntBASIC-1.77□□□□□ -2.69
FOXA2Q9Y261 MIR1254-1-201ENST00000408257 97 ntBASIC-1.78□□□□□ -2.69
FOXA2Q9Y261 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.79□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.79□□□□□ -2.7
FOXA2Q9Y261 RNA5SP225-201ENST00000410874 135 ntBASIC-1.79□□□□□ -2.7
FOXA2Q9Y261 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.79□□□□□ -2.7
FOXA2Q9Y261 SNORD45.2-201ENST00000363552 72 ntBASIC-1.8□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.8□□□□□ -2.7
FOXA2Q9Y261 RNU6-800P-201ENST00000384473 103 ntBASIC-1.8□□□□□ -2.7
FOXA2Q9Y261 MIR3938-201ENST00000582157 103 ntBASIC-1.8□□□□□ -2.7
FOXA2Q9Y261 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.81□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.81□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.81□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.82□□□□□ -2.7
FOXA2Q9Y261 MIR1302-4-201ENST00000408701 150 ntBASIC-1.82□□□□□ -2.7
FOXA2Q9Y261 AL451105.1-201ENST00000450005 189 ntBASIC-1.82□□□□□ -2.7
FOXA2Q9Y261 AL731768.1-201ENST00000603124 139 ntBASIC-1.82□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.83□□□□□ -2.7
FOXA2Q9Y261 MIR4662A-201ENST00000637499 67 ntBASIC-1.83□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.85□□□□□ -2.71
FOXA2Q9Y261 RNU6-776P-201ENST00000364403 104 ntBASIC-1.85□□□□□ -2.71
FOXA2Q9Y261 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.85□□□□□ -2.71
FOXA2Q9Y261 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.86□□□□□ -2.71
FOXA2Q9Y261 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.86□□□□□ -2.71
FOXA2Q9Y261 AC110620.1-201ENST00000416042 228 ntBASIC-1.86□□□□□ -2.71
FOXA2Q9Y261 RNU6-742P-201ENST00000365289 107 ntBASIC-1.87□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms