Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.6□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 RNU6-68P-201ENST00000516576 104 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.61□□□□□ -2.67
FOXA2Q9Y261 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 RNA5SP93-201ENST00000362525 114 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 SNORA25.4-201ENST00000363666 124 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 SNORD30.1-201ENST00000391309 70 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 RNU6-231P-201ENST00000517122 103 ntBASIC-1.62□□□□□ -2.67
FOXA2Q9Y261 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.63□□□□□ -2.67
FOXA2Q9Y261 SNORA25.5-201ENST00000363782 126 ntBASIC-1.63□□□□□ -2.67
FOXA2Q9Y261 RNU6-119P-201ENST00000364882 107 ntBASIC-1.63□□□□□ -2.67
FOXA2Q9Y261 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.63□□□□□ -2.67
FOXA2Q9Y261 RNU6-810P-201ENST00000364001 107 ntBASIC-1.64□□□□□ -2.67
FOXA2Q9Y261 RNU6-828P-201ENST00000364876 107 ntBASIC-1.64□□□□□ -2.67
FOXA2Q9Y261 RNU6-573P-201ENST00000383938 106 ntBASIC-1.64□□□□□ -2.67
FOXA2Q9Y261 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.64□□□□□ -2.67
FOXA2Q9Y261 SNORD116.2-201ENST00000391251 93 ntBASIC-1.64□□□□□ -2.67
FOXA2Q9Y261 RNU6-871P-201ENST00000516122 100 ntBASIC-1.64□□□□□ -2.67
FOXA2Q9Y261 MIR1255A-201ENST00000408338 113 ntBASIC-1.65□□□□□ -2.67
FOXA2Q9Y261 RNU6-857P-201ENST00000515893 110 ntBASIC-1.65□□□□□ -2.67
FOXA2Q9Y261 RNU6-122P-201ENST00000516818 107 ntBASIC-1.65□□□□□ -2.67
FOXA2Q9Y261 SNORD18C-201ENST00000362704 69 ntBASIC-1.66□□□□□ -2.68
FOXA2Q9Y261 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.66□□□□□ -2.68
FOXA2Q9Y261 SNORA26.2-201ENST00000390922 122 ntBASIC-1.66□□□□□ -2.68
FOXA2Q9Y261 RNY4P29-201ENST00000410801 97 ntBASIC-1.66□□□□□ -2.68
FOXA2Q9Y261 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.67□□□□□ -2.68
FOXA2Q9Y261 RNU6-279P-201ENST00000391297 101 ntBASIC-1.67□□□□□ -2.68
FOXA2Q9Y261 MIR548N-201ENST00000408742 75 ntBASIC-1.67□□□□□ -2.68
FOXA2Q9Y261 SNORD54-201ENST00000459159 67 ntBASIC-1.67□□□□□ -2.68
FOXA2Q9Y261 MIR202-201ENST00000362219 110 ntBASIC-1.68□□□□□ -2.68
FOXA2Q9Y261 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.68□□□□□ -2.68
FOXA2Q9Y261 RNU6-649P-201ENST00000384463 107 ntBASIC-1.68□□□□□ -2.68
FOXA2Q9Y261 RNU6-520P-201ENST00000384717 104 ntBASIC-1.69□□□□□ -2.68
FOXA2Q9Y261 RNU6-530P-201ENST00000391180 107 ntBASIC-1.69□□□□□ -2.68
FOXA2Q9Y261 RNU6-912P-201ENST00000363800 104 ntBASIC-1.7□□□□□ -2.68
FOXA2Q9Y261 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.7□□□□□ -2.68
FOXA2Q9Y261 SNORA40B-201ENST00000385573 128 ntBASIC-1.7□□□□□ -2.68
FOXA2Q9Y261 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.7□□□□□ -2.68
FOXA2Q9Y261 RNY4P9-201ENST00000363194 97 ntBASIC-1.71□□□□□ -2.68
FOXA2Q9Y261 RNU7-119P-201ENST00000459279 63 ntBASIC-1.71□□□□□ -2.68
FOXA2Q9Y261 MIR4511-201ENST00000582784 87 ntBASIC-1.71□□□□□ -2.68
FOXA2Q9Y261 U6.111-201ENST00000636093 83 ntBASIC-1.71□□□□□ -2.68
FOXA2Q9Y261 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 RNU6-539P-201ENST00000516665 103 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 AC103706.3-201ENST00000636297 85 ntBASIC-1.72□□□□□ -2.68
FOXA2Q9Y261 RNU6-230P-201ENST00000362457 104 ntBASIC-1.73□□□□□ -2.69
FOXA2Q9Y261 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.73□□□□□ -2.69
FOXA2Q9Y261 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.73□□□□□ -2.69
FOXA2Q9Y261 RNU6-940P-201ENST00000363433 104 ntBASIC-1.74□□□□□ -2.69
FOXA2Q9Y261 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.74□□□□□ -2.69
FOXA2Q9Y261 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.74□□□□□ -2.69
FOXA2Q9Y261 MIR1207-201ENST00000408249 87 ntBASIC-1.74□□□□□ -2.69
FOXA2Q9Y261 SNORA40.16-201ENST00000517238 121 ntBASIC-1.74□□□□□ -2.69
FOXA2Q9Y261 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.74□□□□□ -2.69
FOXA2Q9Y261 SNORD78.1-201ENST00000390866 65 ntBASIC-1.75□□□□□ -2.69
FOXA2Q9Y261 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.75□□□□□ -2.69
FOXA2Q9Y261 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.76□□□□□ -2.69
FOXA2Q9Y261 SNORD60-201ENST00000383903 83 ntBASIC-1.76□□□□□ -2.69
FOXA2Q9Y261 MIR5693-201ENST00000577722 73 ntBASIC-1.76□□□□□ -2.69
FOXA2Q9Y261 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.77□□□□□ -2.69
FOXA2Q9Y261 RNU6-361P-201ENST00000364454 107 ntBASIC-1.77□□□□□ -2.69
FOXA2Q9Y261 SNORA17.4-201ENST00000391287 132 ntBASIC-1.77□□□□□ -2.69
FOXA2Q9Y261 MIR4723-201ENST00000585070 81 ntBASIC-1.77□□□□□ -2.69
FOXA2Q9Y261 MIR4679-1-201ENST00000637619 75 ntBASIC-1.77□□□□□ -2.69
FOXA2Q9Y261 MIR1254-1-201ENST00000408257 97 ntBASIC-1.78□□□□□ -2.69
FOXA2Q9Y261 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.79□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.79□□□□□ -2.7
FOXA2Q9Y261 RNA5SP225-201ENST00000410874 135 ntBASIC-1.79□□□□□ -2.7
FOXA2Q9Y261 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.79□□□□□ -2.7
FOXA2Q9Y261 SNORD45.2-201ENST00000363552 72 ntBASIC-1.8□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.8□□□□□ -2.7
FOXA2Q9Y261 RNU6-800P-201ENST00000384473 103 ntBASIC-1.8□□□□□ -2.7
FOXA2Q9Y261 MIR3938-201ENST00000582157 103 ntBASIC-1.8□□□□□ -2.7
FOXA2Q9Y261 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.81□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.81□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.81□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.82□□□□□ -2.7
FOXA2Q9Y261 MIR1302-4-201ENST00000408701 150 ntBASIC-1.82□□□□□ -2.7
FOXA2Q9Y261 AL451105.1-201ENST00000450005 189 ntBASIC-1.82□□□□□ -2.7
FOXA2Q9Y261 AL731768.1-201ENST00000603124 139 ntBASIC-1.82□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.83□□□□□ -2.7
FOXA2Q9Y261 MIR4662A-201ENST00000637499 67 ntBASIC-1.83□□□□□ -2.7
FOXA2Q9Y261 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.85□□□□□ -2.71
FOXA2Q9Y261 RNU6-776P-201ENST00000364403 104 ntBASIC-1.85□□□□□ -2.71
FOXA2Q9Y261 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.85□□□□□ -2.71
FOXA2Q9Y261 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.86□□□□□ -2.71
FOXA2Q9Y261 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.86□□□□□ -2.71
FOXA2Q9Y261 AC110620.1-201ENST00000416042 228 ntBASIC-1.86□□□□□ -2.71
FOXA2Q9Y261 RNU6-742P-201ENST00000365289 107 ntBASIC-1.87□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 183.1 ms