Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 SNORA40B-201ENST00000385573 128 ntBASIC-3□□□□□ -2.89
CLN6Q9NWW5 RNU6-687P-201ENST00000516443 89 ntBASIC-3□□□□□ -2.89
CLN6Q9NWW5 SNX3P1Y-201ENST00000615757 176 ntBASIC-3□□□□□ -2.89
CLN6Q9NWW5 RNU6-919P-201ENST00000516731 104 ntBASIC-3.01□□□□□ -2.89
CLN6Q9NWW5 MIR4426-201ENST00000640330 63 ntBASIC-3.01□□□□□ -2.89
CLN6Q9NWW5 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.02□□□□□ -2.89
CLN6Q9NWW5 MT-TR-201ENST00000387439 65 ntBASIC-3.02□□□□□ -2.89
CLN6Q9NWW5 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.03□□□□□ -2.89
CLN6Q9NWW5 RNA5SP93-201ENST00000362525 114 ntBASIC-3.04□□□□□ -2.9
CLN6Q9NWW5 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.04□□□□□ -2.9
CLN6Q9NWW5 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.04□□□□□ -2.9
CLN6Q9NWW5 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.04□□□□□ -2.9
CLN6Q9NWW5 RNU6-411P-201ENST00000384451 107 ntBASIC-3.04□□□□□ -2.9
CLN6Q9NWW5 RNU6-215P-201ENST00000365169 102 ntBASIC-3.05□□□□□ -2.9
CLN6Q9NWW5 SNORA40.16-201ENST00000517238 121 ntBASIC-3.05□□□□□ -2.9
CLN6Q9NWW5 RNY4P7-201ENST00000364600 96 ntBASIC-3.07□□□□□ -2.9
CLN6Q9NWW5 RNU6-590P-201ENST00000365039 107 ntBASIC-3.07□□□□□ -2.9
CLN6Q9NWW5 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.07□□□□□ -2.9
CLN6Q9NWW5 SNORD20-201ENST00000384550 80 ntBASIC-3.07□□□□□ -2.9
CLN6Q9NWW5 AL451105.1-201ENST00000450005 189 ntBASIC-3.07□□□□□ -2.9
CLN6Q9NWW5 SNORD113-1-201ENST00000365321 69 ntBASIC-3.08□□□□□ -2.9
CLN6Q9NWW5 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.08□□□□□ -2.9
CLN6Q9NWW5 RNU6-300P-201ENST00000459080 104 ntBASIC-3.08□□□□□ -2.9
CLN6Q9NWW5 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.08□□□□□ -2.9
CLN6Q9NWW5 MIR494-201ENST00000349529 81 ntBASIC-3.09□□□□□ -2.9
CLN6Q9NWW5 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.09□□□□□ -2.9
CLN6Q9NWW5 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.09□□□□□ -2.9
CLN6Q9NWW5 RNA5SP89-201ENST00000410300 108 ntBASIC-3.09□□□□□ -2.9
CLN6Q9NWW5 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.1□□□□□ -2.91
CLN6Q9NWW5 SNORD45.2-201ENST00000363552 72 ntBASIC-3.11□□□□□ -2.91
CLN6Q9NWW5 MIR1254-1-201ENST00000408257 97 ntBASIC-3.11□□□□□ -2.91
CLN6Q9NWW5 RNY4P30-201ENST00000410216 95 ntBASIC-3.11□□□□□ -2.91
CLN6Q9NWW5 RNU6-176P-201ENST00000517196 105 ntBASIC-3.12□□□□□ -2.91
CLN6Q9NWW5 MIR4666B-201ENST00000578142 81 ntBASIC-3.12□□□□□ -2.91
CLN6Q9NWW5 RNU6-230P-201ENST00000362457 104 ntBASIC-3.13□□□□□ -2.91
CLN6Q9NWW5 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.13□□□□□ -2.91
CLN6Q9NWW5 RNU6-663P-201ENST00000391105 106 ntBASIC-3.13□□□□□ -2.91
CLN6Q9NWW5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.13□□□□□ -2.91
CLN6Q9NWW5 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.14□□□□□ -2.91
CLN6Q9NWW5 MIR450A2-201ENST00000385022 100 ntBASIC-3.14□□□□□ -2.91
CLN6Q9NWW5 RNU7-119P-201ENST00000459279 63 ntBASIC-3.14□□□□□ -2.91
CLN6Q9NWW5 RNU6-122P-201ENST00000516818 107 ntBASIC-3.14□□□□□ -2.91
CLN6Q9NWW5 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.15□□□□□ -2.91
CLN6Q9NWW5 SNORA25.5-201ENST00000363782 126 ntBASIC-3.15□□□□□ -2.91
CLN6Q9NWW5 AL606753.1-201ENST00000427435 87 ntBASIC-3.15□□□□□ -2.91
CLN6Q9NWW5 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.15□□□□□ -2.91
CLN6Q9NWW5 RNU6-634P-201ENST00000459134 106 ntBASIC-3.16□□□□□ -2.92
CLN6Q9NWW5 U7.4-201ENST00000614961 63 ntBASIC-3.16□□□□□ -2.92
CLN6Q9NWW5 RNU6-44P-201ENST00000384045 107 ntBASIC-3.19□□□□□ -2.92
CLN6Q9NWW5 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.19□□□□□ -2.92
CLN6Q9NWW5 SNORA25.4-201ENST00000363666 124 ntBASIC-3.2□□□□□ -2.92
CLN6Q9NWW5 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.2□□□□□ -2.92
CLN6Q9NWW5 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.2□□□□□ -2.92
CLN6Q9NWW5 RNU6-345P-201ENST00000517001 107 ntBASIC-3.2□□□□□ -2.92
CLN6Q9NWW5 RNU6-742P-201ENST00000365289 107 ntBASIC-3.21□□□□□ -2.92
CLN6Q9NWW5 AL731768.1-201ENST00000603124 139 ntBASIC-3.21□□□□□ -2.92
CLN6Q9NWW5 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.22□□□□□ -2.92
CLN6Q9NWW5 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.23□□□□□ -2.93
CLN6Q9NWW5 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.24□□□□□ -2.93
CLN6Q9NWW5 SNORD30.1-201ENST00000391309 70 ntBASIC-3.25□□□□□ -2.93
CLN6Q9NWW5 RNU6-294P-201ENST00000364999 102 ntBASIC-3.26□□□□□ -2.93
CLN6Q9NWW5 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.26□□□□□ -2.93
CLN6Q9NWW5 RNU6-419P-201ENST00000517030 63 ntBASIC-3.26□□□□□ -2.93
CLN6Q9NWW5 RNU6-787P-201ENST00000384032 107 ntBASIC-3.27□□□□□ -2.93
CLN6Q9NWW5 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.28□□□□□ -2.93
CLN6Q9NWW5 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.29□□□□□ -2.94
CLN6Q9NWW5 MIR5693-201ENST00000577722 73 ntBASIC-3.29□□□□□ -2.94
CLN6Q9NWW5 RNY4P25-201ENST00000459254 96 ntBASIC-3.3□□□□□ -2.94
CLN6Q9NWW5 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.3□□□□□ -2.94
CLN6Q9NWW5 RNU6-940P-201ENST00000363433 104 ntBASIC-3.31□□□□□ -2.94
CLN6Q9NWW5 RNU6-820P-201ENST00000384273 107 ntBASIC-3.31□□□□□ -2.94
CLN6Q9NWW5 RNU6-871P-201ENST00000516122 100 ntBASIC-3.32□□□□□ -2.94
CLN6Q9NWW5 RNU6-153P-201ENST00000364422 104 ntBASIC-3.34□□□□□ -2.94
CLN6Q9NWW5 RNU6-800P-201ENST00000384473 103 ntBASIC-3.34□□□□□ -2.94
CLN6Q9NWW5 MIR4511-201ENST00000582784 87 ntBASIC-3.35□□□□□ -2.95
CLN6Q9NWW5 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.36□□□□□ -2.95
CLN6Q9NWW5 RNY4-201ENST00000516507 96 ntBASIC-3.37□□□□□ -2.95
CLN6Q9NWW5 AC103706.3-201ENST00000636297 85 ntBASIC-3.37□□□□□ -2.95
CLN6Q9NWW5 RNU6-822P-201ENST00000362707 106 ntBASIC-3.38□□□□□ -2.95
CLN6Q9NWW5 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.4□□□□□ -2.95
CLN6Q9NWW5 MIR3938-201ENST00000582157 103 ntBASIC-3.4□□□□□ -2.95
CLN6Q9NWW5 MIR4679-1-201ENST00000637619 75 ntBASIC-3.4□□□□□ -2.95
CLN6Q9NWW5 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.41□□□□□ -2.96
CLN6Q9NWW5 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.41□□□□□ -2.96
CLN6Q9NWW5 U6.111-201ENST00000636093 83 ntBASIC-3.41□□□□□ -2.96
CLN6Q9NWW5 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.42□□□□□ -2.96
CLN6Q9NWW5 RNU6-539P-201ENST00000516665 103 ntBASIC-3.42□□□□□ -2.96
CLN6Q9NWW5 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.43□□□□□ -2.96
CLN6Q9NWW5 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.43□□□□□ -2.96
CLN6Q9NWW5 RNU6-406P-201ENST00000516470 107 ntBASIC-3.43□□□□□ -2.96
CLN6Q9NWW5 AC062037.1-201ENST00000605302 128 ntBASIC-3.43□□□□□ -2.96
CLN6Q9NWW5 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.45□□□□□ -2.96
CLN6Q9NWW5 AL359920.1-201ENST00000618332 176 ntBASIC-3.45□□□□□ -2.96
CLN6Q9NWW5 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.45□□□□□ -2.96
CLN6Q9NWW5 AC139453.2-201ENST00000487255 133 ntBASIC-3.46□□□□□ -2.96
CLN6Q9NWW5 MIR3202-2-201ENST00000635980 79 ntBASIC-3.46□□□□□ -2.96
CLN6Q9NWW5 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.47□□□□□ -2.96
CLN6Q9NWW5 AL603908.1-201ENST00000406098 201 ntBASIC-3.47□□□□□ -2.96
CLN6Q9NWW5 MIR5582-201ENST00000579697 68 ntBASIC-3.47□□□□□ -2.96
CLN6Q9NWW5 MIR548X-201ENST00000580069 75 ntBASIC-3.51□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms