Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 MIR4770-201ENST00000579149 58 ntBASIC-0.91□□□□□ -2.55
PCNX3Q9H6A9 SNORD18C-201ENST00000362704 69 ntBASIC-0.91□□□□□ -2.56
PCNX3Q9H6A9 RNU6-563P-201ENST00000364872 108 ntBASIC-0.91□□□□□ -2.56
PCNX3Q9H6A9 MIR3115-201ENST00000577915 68 ntBASIC-0.91□□□□□ -2.56
PCNX3Q9H6A9 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.92□□□□□ -2.56
PCNX3Q9H6A9 MIR4520-1-201ENST00000582609 70 ntBASIC-0.93□□□□□ -2.56
PCNX3Q9H6A9 MIR4426-201ENST00000640330 63 ntBASIC-0.93□□□□□ -2.56
PCNX3Q9H6A9 RNU6-980P-201ENST00000516925 103 ntBASIC-0.93□□□□□ -2.56
PCNX3Q9H6A9 MIR5591-201ENST00000578248 65 ntBASIC-0.93□□□□□ -2.56
PCNX3Q9H6A9 U6.97-201ENST00000636904 101 ntBASIC-0.93□□□□□ -2.56
PCNX3Q9H6A9 MIR202-201ENST00000362219 110 ntBASIC-0.94□□□□□ -2.56
PCNX3Q9H6A9 RNU6-400P-201ENST00000391173 106 ntBASIC-0.94□□□□□ -2.56
PCNX3Q9H6A9 AC079150.2-201ENST00000443733 78 ntBASIC-0.94□□□□□ -2.56
PCNX3Q9H6A9 RNU6-176P-201ENST00000517196 105 ntBASIC-0.95□□□□□ -2.56
PCNX3Q9H6A9 MIR365A-201ENST00000362260 87 ntBASIC-0.96□□□□□ -2.56
PCNX3Q9H6A9 SNORA17.4-201ENST00000391287 132 ntBASIC-0.96□□□□□ -2.56
PCNX3Q9H6A9 MIR1285-2-201ENST00000408311 88 ntBASIC-0.96□□□□□ -2.56
PCNX3Q9H6A9 AC013734.1-201ENST00000619329 111 ntBASIC-0.96□□□□□ -2.56
PCNX3Q9H6A9 AC091912.2-201ENST00000624798 167 ntBASIC-0.96□□□□□ -2.56
PCNX3Q9H6A9 MIR548AL-201ENST00000578416 97 ntBASIC-0.96□□□□□ -2.56
PCNX3Q9H6A9 SNORD114-3-201ENST00000364969 75 ntBASIC-0.97□□□□□ -2.56
PCNX3Q9H6A9 MIR8485-201ENST00000401372 91 ntBASIC-0.97□□□□□ -2.56
PCNX3Q9H6A9 Y_RNA.722-201ENST00000517279 114 ntBASIC-0.98□□□□□ -2.57
PCNX3Q9H6A9 RNU6-300P-201ENST00000459080 104 ntBASIC-0.99□□□□□ -2.57
PCNX3Q9H6A9 MIR6874-201ENST00000635894 71 ntBASIC-0.99□□□□□ -2.57
PCNX3Q9H6A9 MIR4317-201ENST00000637586 65 ntBASIC-0.99□□□□□ -2.57
PCNX3Q9H6A9 RNU6-808P-201ENST00000391233 108 ntBASIC-1□□□□□ -2.57
PCNX3Q9H6A9 MIR6502-201ENST00000617296 76 ntBASIC-1□□□□□ -2.57
PCNX3Q9H6A9 RNU6-742P-201ENST00000365289 107 ntBASIC-1.02□□□□□ -2.57
PCNX3Q9H6A9 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.03□□□□□ -2.57
PCNX3Q9H6A9 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.03□□□□□ -2.57
PCNX3Q9H6A9 RNU6-936P-201ENST00000384005 107 ntBASIC-1.03□□□□□ -2.57
PCNX3Q9H6A9 RNU6-841P-201ENST00000383872 107 ntBASIC-1.03□□□□□ -2.57
PCNX3Q9H6A9 RNA5SP461-201ENST00000516451 104 ntBASIC-1.04□□□□□ -2.58
PCNX3Q9H6A9 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.04□□□□□ -2.58
PCNX3Q9H6A9 MIR548H4-201ENST00000408689 111 ntBASIC-1.06□□□□□ -2.58
PCNX3Q9H6A9 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.07□□□□□ -2.58
PCNX3Q9H6A9 MIR581-201ENST00000384895 96 ntBASIC-1.07□□□□□ -2.58
PCNX3Q9H6A9 RNU6-226P-201ENST00000363778 107 ntBASIC-1.08□□□□□ -2.58
PCNX3Q9H6A9 MIR4441-201ENST00000582623 100 ntBASIC-1.08□□□□□ -2.58
PCNX3Q9H6A9 U4.2-201ENST00000618561 85 ntBASIC-1.08□□□□□ -2.58
PCNX3Q9H6A9 RNU6-987P-201ENST00000384759 104 ntBASIC-1.08□□□□□ -2.58
PCNX3Q9H6A9 MIR3123-201ENST00000583417 75 ntBASIC-1.08□□□□□ -2.58
PCNX3Q9H6A9 RNU6-753P-201ENST00000363926 107 ntBASIC-1.1□□□□□ -2.58
PCNX3Q9H6A9 MIR1207-201ENST00000408249 87 ntBASIC-1.1□□□□□ -2.58
PCNX3Q9H6A9 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.11□□□□□ -2.59
PCNX3Q9H6A9 RNU6-68P-201ENST00000516576 104 ntBASIC-1.11□□□□□ -2.59
PCNX3Q9H6A9 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.11□□□□□ -2.59
PCNX3Q9H6A9 RNU4-37P-201ENST00000410214 84 ntBASIC-1.11□□□□□ -2.59
PCNX3Q9H6A9 RNU4-88P-201ENST00000411220 86 ntBASIC-1.11□□□□□ -2.59
PCNX3Q9H6A9 snoU13.10-201ENST00000459301 103 ntBASIC-1.11□□□□□ -2.59
PCNX3Q9H6A9 MIR1246-201ENST00000636535 73 ntBASIC-1.11□□□□□ -2.59
PCNX3Q9H6A9 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.12□□□□□ -2.59
PCNX3Q9H6A9 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.12□□□□□ -2.59
PCNX3Q9H6A9 MIR548W-201ENST00000581970 74 ntBASIC-1.12□□□□□ -2.59
PCNX3Q9H6A9 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.13□□□□□ -2.59
PCNX3Q9H6A9 MIR548AM-201ENST00000584298 74 ntBASIC-1.13□□□□□ -2.59
PCNX3Q9H6A9 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.13□□□□□ -2.59
PCNX3Q9H6A9 MIR548H1-201ENST00000408610 102 ntBASIC-1.13□□□□□ -2.59
PCNX3Q9H6A9 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.13□□□□□ -2.59
PCNX3Q9H6A9 RNA5SP180-201ENST00000516181 101 ntBASIC-1.13□□□□□ -2.59
PCNX3Q9H6A9 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.14□□□□□ -2.59
PCNX3Q9H6A9 RNU6-838P-201ENST00000363399 108 ntBASIC-1.15□□□□□ -2.59
PCNX3Q9H6A9 RNU6-912P-201ENST00000363800 104 ntBASIC-1.16□□□□□ -2.59
PCNX3Q9H6A9 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.17□□□□□ -2.6
PCNX3Q9H6A9 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.17□□□□□ -2.6
PCNX3Q9H6A9 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.18□□□□□ -2.6
PCNX3Q9H6A9 RNU6-983P-201ENST00000516004 103 ntBASIC-1.18□□□□□ -2.6
PCNX3Q9H6A9 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.18□□□□□ -2.6
PCNX3Q9H6A9 MIR545-201ENST00000385085 106 ntBASIC-1.18□□□□□ -2.6
PCNX3Q9H6A9 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.2□□□□□ -2.6
PCNX3Q9H6A9 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.2□□□□□ -2.6
PCNX3Q9H6A9 MIR664B-201ENST00000626756 61 ntBASIC-1.21□□□□□ -2.6
PCNX3Q9H6A9 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.22□□□□□ -2.6
PCNX3Q9H6A9 RNU6-822P-201ENST00000362707 106 ntBASIC-1.22□□□□□ -2.6
PCNX3Q9H6A9 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.23□□□□□ -2.61
PCNX3Q9H6A9 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.23□□□□□ -2.61
PCNX3Q9H6A9 SNORD18.1-201ENST00000363807 70 ntBASIC-1.23□□□□□ -2.61
PCNX3Q9H6A9 RNU6-930P-201ENST00000390938 100 ntBASIC-1.23□□□□□ -2.61
PCNX3Q9H6A9 RNU6-141P-201ENST00000410499 105 ntBASIC-1.23□□□□□ -2.61
PCNX3Q9H6A9 RNU6-119P-201ENST00000364882 107 ntBASIC-1.24□□□□□ -2.61
PCNX3Q9H6A9 RNA5SP86-201ENST00000390869 98 ntBASIC-1.25□□□□□ -2.61
PCNX3Q9H6A9 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.25□□□□□ -2.61
PCNX3Q9H6A9 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.27□□□□□ -2.61
PCNX3Q9H6A9 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.27□□□□□ -2.61
PCNX3Q9H6A9 RNU6-345P-201ENST00000517001 107 ntBASIC-1.27□□□□□ -2.61
PCNX3Q9H6A9 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.27□□□□□ -2.61
PCNX3Q9H6A9 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.27□□□□□ -2.61
PCNX3Q9H6A9 RNA5SP224-201ENST00000365069 126 ntBASIC-1.27□□□□□ -2.61
PCNX3Q9H6A9 AC108019.1-201ENST00000512540 175 ntBASIC-1.28□□□□□ -2.61
PCNX3Q9H6A9 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.28□□□□□ -2.62
PCNX3Q9H6A9 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.29□□□□□ -2.62
PCNX3Q9H6A9 RNY4P27-201ENST00000363341 96 ntBASIC-1.29□□□□□ -2.62
PCNX3Q9H6A9 SNORD113-3-201ENST00000364830 72 ntBASIC-1.29□□□□□ -2.62
PCNX3Q9H6A9 MIR487B-201ENST00000385021 84 ntBASIC-1.29□□□□□ -2.62
PCNX3Q9H6A9 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.3□□□□□ -2.62
PCNX3Q9H6A9 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.3□□□□□ -2.62
PCNX3Q9H6A9 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.31□□□□□ -2.62
PCNX3Q9H6A9 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.31□□□□□ -2.62
PCNX3Q9H6A9 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms