Protein–RNA interactions for Protein: Q9H4Z3

PCIF1, Phosphorylated CTD-interacting factor 1, humanhuman

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1Q9H4Z3 RNU6-530P-201ENST00000391180 107 ntBASIC-1.3□□□□□ -2.62
PCIF1Q9H4Z3 AC018880.2-201ENST00000414265 201 ntBASIC-1.3□□□□□ -2.62
PCIF1Q9H4Z3 RNU6-980P-201ENST00000516925 103 ntBASIC-1.31□□□□□ -2.62
PCIF1Q9H4Z3 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.32□□□□□ -2.62
PCIF1Q9H4Z3 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.32□□□□□ -2.62
PCIF1Q9H4Z3 MIR4520-1-201ENST00000582609 70 ntBASIC-1.32□□□□□ -2.62
PCIF1Q9H4Z3 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.32□□□□□ -2.62
PCIF1Q9H4Z3 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.32□□□□□ -2.62
PCIF1Q9H4Z3 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.33□□□□□ -2.62
PCIF1Q9H4Z3 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.33□□□□□ -2.62
PCIF1Q9H4Z3 AC120024.2-201ENST00000576526 175 ntBASIC-1.33□□□□□ -2.62
PCIF1Q9H4Z3 RNU6-563P-201ENST00000364872 108 ntBASIC-1.34□□□□□ -2.62
PCIF1Q9H4Z3 RNU6-614P-201ENST00000384369 107 ntBASIC-1.35□□□□□ -2.63
PCIF1Q9H4Z3 RNU6-983P-201ENST00000516004 103 ntBASIC-1.35□□□□□ -2.63
PCIF1Q9H4Z3 U6.59-201ENST00000615686 107 ntBASIC-1.35□□□□□ -2.63
PCIF1Q9H4Z3 MIR6502-201ENST00000617296 76 ntBASIC-1.35□□□□□ -2.63
PCIF1Q9H4Z3 RNU4-33P-201ENST00000364316 85 ntBASIC-1.36□□□□□ -2.63
PCIF1Q9H4Z3 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.36□□□□□ -2.63
PCIF1Q9H4Z3 MIR202-201ENST00000362219 110 ntBASIC-1.37□□□□□ -2.63
PCIF1Q9H4Z3 RNA5SP86-201ENST00000390869 98 ntBASIC-1.38□□□□□ -2.63
PCIF1Q9H4Z3 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.38□□□□□ -2.63
PCIF1Q9H4Z3 AC013734.1-201ENST00000619329 111 ntBASIC-1.38□□□□□ -2.63
PCIF1Q9H4Z3 RNU6-79P-201ENST00000362511 107 ntBASIC-1.39□□□□□ -2.63
PCIF1Q9H4Z3 RNY4P27-201ENST00000363341 96 ntBASIC-1.39□□□□□ -2.63
PCIF1Q9H4Z3 SNORD114-3-201ENST00000364969 75 ntBASIC-1.4□□□□□ -2.63
PCIF1Q9H4Z3 MTND4LP19-201ENST00000403051 166 ntBASIC-1.4□□□□□ -2.63
PCIF1Q9H4Z3 RNU6-936P-201ENST00000384005 107 ntBASIC-1.41□□□□□ -2.64
PCIF1Q9H4Z3 SNORD18.1-201ENST00000363807 70 ntBASIC-1.42□□□□□ -2.64
PCIF1Q9H4Z3 RNU6-361P-201ENST00000364454 107 ntBASIC-1.43□□□□□ -2.64
PCIF1Q9H4Z3 MIR4426-201ENST00000640330 63 ntBASIC-1.43□□□□□ -2.64
PCIF1Q9H4Z3 MIR1207-201ENST00000408249 87 ntBASIC-1.44□□□□□ -2.64
PCIF1Q9H4Z3 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.44□□□□□ -2.64
PCIF1Q9H4Z3 U6.97-201ENST00000636904 101 ntBASIC-1.46□□□□□ -2.64
PCIF1Q9H4Z3 RNU6-742P-201ENST00000365289 107 ntBASIC-1.47□□□□□ -2.64
PCIF1Q9H4Z3 SNORD60-201ENST00000383903 83 ntBASIC-1.47□□□□□ -2.64
PCIF1Q9H4Z3 SNORA17.4-201ENST00000391287 132 ntBASIC-1.47□□□□□ -2.64
PCIF1Q9H4Z3 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.49□□□□□ -2.65
PCIF1Q9H4Z3 RNU6-400P-201ENST00000391173 106 ntBASIC-1.49□□□□□ -2.65
PCIF1Q9H4Z3 MIR548H1-201ENST00000408610 102 ntBASIC-1.49□□□□□ -2.65
PCIF1Q9H4Z3 MIR487B-201ENST00000385021 84 ntBASIC-1.5□□□□□ -2.65
PCIF1Q9H4Z3 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.51□□□□□ -2.65
PCIF1Q9H4Z3 MIR496-201ENST00000385226 102 ntBASIC-1.52□□□□□ -2.65
PCIF1Q9H4Z3 MIR548N-201ENST00000408742 75 ntBASIC-1.52□□□□□ -2.65
PCIF1Q9H4Z3 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.52□□□□□ -2.65
PCIF1Q9H4Z3 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.54□□□□□ -2.66
PCIF1Q9H4Z3 AC108019.1-201ENST00000512540 175 ntBASIC-1.54□□□□□ -2.66
PCIF1Q9H4Z3 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.54□□□□□ -2.66
PCIF1Q9H4Z3 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.55□□□□□ -2.66
PCIF1Q9H4Z3 RNU6-808P-201ENST00000391233 108 ntBASIC-1.55□□□□□ -2.66
PCIF1Q9H4Z3 RNU6-118P-201ENST00000516552 102 ntBASIC-1.55□□□□□ -2.66
PCIF1Q9H4Z3 RNU6-753P-201ENST00000363926 107 ntBASIC-1.56□□□□□ -2.66
PCIF1Q9H4Z3 MIR4756-201ENST00000577874 78 ntBASIC-1.56□□□□□ -2.66
PCIF1Q9H4Z3 MIR581-201ENST00000384895 96 ntBASIC-1.57□□□□□ -2.66
PCIF1Q9H4Z3 RNU6-300P-201ENST00000459080 104 ntBASIC-1.57□□□□□ -2.66
PCIF1Q9H4Z3 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.57□□□□□ -2.66
PCIF1Q9H4Z3 RNU6-695P-201ENST00000391157 104 ntBASIC-1.58□□□□□ -2.66
PCIF1Q9H4Z3 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.58□□□□□ -2.66
PCIF1Q9H4Z3 MIR664B-201ENST00000626756 61 ntBASIC-1.59□□□□□ -2.66
PCIF1Q9H4Z3 MIR548AL-201ENST00000578416 97 ntBASIC-1.6□□□□□ -2.67
PCIF1Q9H4Z3 SNORD18C-201ENST00000362704 69 ntBASIC-1.62□□□□□ -2.67
PCIF1Q9H4Z3 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.62□□□□□ -2.67
PCIF1Q9H4Z3 RNU6-119P-201ENST00000364882 107 ntBASIC-1.62□□□□□ -2.67
PCIF1Q9H4Z3 MIR3123-201ENST00000583417 75 ntBASIC-1.63□□□□□ -2.67
PCIF1Q9H4Z3 RNU6-838P-201ENST00000363399 108 ntBASIC-1.64□□□□□ -2.67
PCIF1Q9H4Z3 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.64□□□□□ -2.67
PCIF1Q9H4Z3 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.64□□□□□ -2.67
PCIF1Q9H4Z3 RNU6-176P-201ENST00000517196 105 ntBASIC-1.64□□□□□ -2.67
PCIF1Q9H4Z3 MIR3139-201ENST00000579145 76 ntBASIC-1.65□□□□□ -2.67
PCIF1Q9H4Z3 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.66□□□□□ -2.68
PCIF1Q9H4Z3 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.67□□□□□ -2.68
PCIF1Q9H4Z3 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.68□□□□□ -2.68
PCIF1Q9H4Z3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.7□□□□□ -2.68
PCIF1Q9H4Z3 RNA5SP405-201ENST00000363059 114 ntBASIC-1.71□□□□□ -2.68
PCIF1Q9H4Z3 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.71□□□□□ -2.68
PCIF1Q9H4Z3 RNU6-987P-201ENST00000384759 104 ntBASIC-1.71□□□□□ -2.68
PCIF1Q9H4Z3 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.71□□□□□ -2.68
PCIF1Q9H4Z3 MT-TM-201ENST00000387377 68 ntBASIC-1.72□□□□□ -2.68
PCIF1Q9H4Z3 RNU6-930P-201ENST00000390938 100 ntBASIC-1.72□□□□□ -2.68
PCIF1Q9H4Z3 RNU4-88P-201ENST00000411220 86 ntBASIC-1.72□□□□□ -2.68
PCIF1Q9H4Z3 RNA5SP93-201ENST00000362525 114 ntBASIC-1.73□□□□□ -2.69
PCIF1Q9H4Z3 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.73□□□□□ -2.69
PCIF1Q9H4Z3 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.73□□□□□ -2.69
PCIF1Q9H4Z3 RNU4-37P-201ENST00000410214 84 ntBASIC-1.73□□□□□ -2.69
PCIF1Q9H4Z3 SNORD54-201ENST00000459159 67 ntBASIC-1.73□□□□□ -2.69
PCIF1Q9H4Z3 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.74□□□□□ -2.69
PCIF1Q9H4Z3 RNU6-141P-201ENST00000410499 105 ntBASIC-1.74□□□□□ -2.69
PCIF1Q9H4Z3 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.75□□□□□ -2.69
PCIF1Q9H4Z3 MIR548H4-201ENST00000408689 111 ntBASIC-1.75□□□□□ -2.69
PCIF1Q9H4Z3 RNU6-841P-201ENST00000383872 107 ntBASIC-1.76□□□□□ -2.69
PCIF1Q9H4Z3 RNU6-68P-201ENST00000516576 104 ntBASIC-1.76□□□□□ -2.69
PCIF1Q9H4Z3 MIR548AM-201ENST00000584298 74 ntBASIC-1.76□□□□□ -2.69
PCIF1Q9H4Z3 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.76□□□□□ -2.69
PCIF1Q9H4Z3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.76□□□□□ -2.69
PCIF1Q9H4Z3 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.77□□□□□ -2.69
PCIF1Q9H4Z3 snoU13.10-201ENST00000459301 103 ntBASIC-1.77□□□□□ -2.69
PCIF1Q9H4Z3 MIR548F3-201ENST00000408509 87 ntBASIC-1.78□□□□□ -2.69
PCIF1Q9H4Z3 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.78□□□□□ -2.69
PCIF1Q9H4Z3 MIR4317-201ENST00000637586 65 ntBASIC-1.78□□□□□ -2.69
PCIF1Q9H4Z3 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.79□□□□□ -2.7
PCIF1Q9H4Z3 MIR379-201ENST00000362218 67 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms