Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-230P-201ENST00000362457 104 ntBASIC-3.05□□□□□ -2.9
RPRD1AQ96P16 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.05□□□□□ -2.9
RPRD1AQ96P16 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.05□□□□□ -2.9
RPRD1AQ96P16 RNU6-649P-201ENST00000384463 107 ntBASIC-3.06□□□□□ -2.9
RPRD1AQ96P16 SNORD116.2-201ENST00000391251 93 ntBASIC-3.06□□□□□ -2.9
RPRD1AQ96P16 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.06□□□□□ -2.9
RPRD1AQ96P16 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.06□□□□□ -2.9
RPRD1AQ96P16 SNORD60-201ENST00000383903 83 ntBASIC-3.07□□□□□ -2.9
RPRD1AQ96P16 MIR450A2-201ENST00000385022 100 ntBASIC-3.07□□□□□ -2.9
RPRD1AQ96P16 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.07□□□□□ -2.9
RPRD1AQ96P16 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.08□□□□□ -2.9
RPRD1AQ96P16 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.08□□□□□ -2.9
RPRD1AQ96P16 RNY4P9-201ENST00000363194 97 ntBASIC-3.09□□□□□ -2.9
RPRD1AQ96P16 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.1□□□□□ -2.91
RPRD1AQ96P16 SNORD113-3-201ENST00000364830 72 ntBASIC-3.11□□□□□ -2.91
RPRD1AQ96P16 RNU6-787P-201ENST00000384032 107 ntBASIC-3.11□□□□□ -2.91
RPRD1AQ96P16 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.12□□□□□ -2.91
RPRD1AQ96P16 SNORA40B-201ENST00000385573 128 ntBASIC-3.12□□□□□ -2.91
RPRD1AQ96P16 RNU6-141P-201ENST00000410499 105 ntBASIC-3.12□□□□□ -2.91
RPRD1AQ96P16 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.13□□□□□ -2.91
RPRD1AQ96P16 RNU6-663P-201ENST00000391105 106 ntBASIC-3.13□□□□□ -2.91
RPRD1AQ96P16 SNORA17.4-201ENST00000391287 132 ntBASIC-3.13□□□□□ -2.91
RPRD1AQ96P16 RNU6-634P-201ENST00000459134 106 ntBASIC-3.14□□□□□ -2.91
RPRD1AQ96P16 RNU6-122P-201ENST00000516818 107 ntBASIC-3.14□□□□□ -2.91
RPRD1AQ96P16 U7.4-201ENST00000614961 63 ntBASIC-3.14□□□□□ -2.91
RPRD1AQ96P16 RNU6-153P-201ENST00000364422 104 ntBASIC-3.16□□□□□ -2.92
RPRD1AQ96P16 RNU6-361P-201ENST00000364454 107 ntBASIC-3.16□□□□□ -2.92
RPRD1AQ96P16 SNORA25.5-201ENST00000363782 126 ntBASIC-3.17□□□□□ -2.92
RPRD1AQ96P16 RNU6-294P-201ENST00000364999 102 ntBASIC-3.17□□□□□ -2.92
RPRD1AQ96P16 RNU6-68P-201ENST00000516576 104 ntBASIC-3.18□□□□□ -2.92
RPRD1AQ96P16 SNORA40.16-201ENST00000517238 121 ntBASIC-3.19□□□□□ -2.92
RPRD1AQ96P16 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.19□□□□□ -2.92
RPRD1AQ96P16 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.19□□□□□ -2.92
RPRD1AQ96P16 RNU6-912P-201ENST00000363800 104 ntBASIC-3.2□□□□□ -2.92
RPRD1AQ96P16 SNORA25.4-201ENST00000363666 124 ntBASIC-3.21□□□□□ -2.92
RPRD1AQ96P16 RNU6-530P-201ENST00000391180 107 ntBASIC-3.21□□□□□ -2.92
RPRD1AQ96P16 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.21□□□□□ -2.92
RPRD1AQ96P16 RNU6-820P-201ENST00000384273 107 ntBASIC-3.24□□□□□ -2.93
RPRD1AQ96P16 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.24□□□□□ -2.93
RPRD1AQ96P16 AL603908.1-201ENST00000406098 201 ntBASIC-3.24□□□□□ -2.93
RPRD1AQ96P16 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.24□□□□□ -2.93
RPRD1AQ96P16 RNU7-119P-201ENST00000459279 63 ntBASIC-3.24□□□□□ -2.93
RPRD1AQ96P16 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.24□□□□□ -2.93
RPRD1AQ96P16 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.25□□□□□ -2.93
RPRD1AQ96P16 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.27□□□□□ -2.93
RPRD1AQ96P16 MIR379-201ENST00000362218 67 ntBASIC-3.28□□□□□ -2.93
RPRD1AQ96P16 SNORD45.2-201ENST00000363552 72 ntBASIC-3.28□□□□□ -2.93
RPRD1AQ96P16 AL451105.1-201ENST00000450005 189 ntBASIC-3.28□□□□□ -2.93
RPRD1AQ96P16 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.29□□□□□ -2.94
RPRD1AQ96P16 SNORD30.1-201ENST00000391309 70 ntBASIC-3.29□□□□□ -2.94
RPRD1AQ96P16 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.3□□□□□ -2.94
RPRD1AQ96P16 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.3□□□□□ -2.94
RPRD1AQ96P16 AC062037.1-201ENST00000605302 128 ntBASIC-3.3□□□□□ -2.94
RPRD1AQ96P16 MIR4426-201ENST00000640330 63 ntBASIC-3.3□□□□□ -2.94
RPRD1AQ96P16 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.32□□□□□ -2.94
RPRD1AQ96P16 RNU6-406P-201ENST00000516470 107 ntBASIC-3.33□□□□□ -2.94
RPRD1AQ96P16 MIR5582-201ENST00000579697 68 ntBASIC-3.33□□□□□ -2.94
RPRD1AQ96P16 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.34□□□□□ -2.94
RPRD1AQ96P16 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.35□□□□□ -2.95
RPRD1AQ96P16 RNY4-201ENST00000516507 96 ntBASIC-3.35□□□□□ -2.95
RPRD1AQ96P16 MIR4511-201ENST00000582784 87 ntBASIC-3.35□□□□□ -2.95
RPRD1AQ96P16 RNU6-940P-201ENST00000363433 104 ntBASIC-3.37□□□□□ -2.95
RPRD1AQ96P16 RNU6-590P-201ENST00000365039 107 ntBASIC-3.37□□□□□ -2.95
RPRD1AQ96P16 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.37□□□□□ -2.95
RPRD1AQ96P16 MIR1254-1-201ENST00000408257 97 ntBASIC-3.37□□□□□ -2.95
RPRD1AQ96P16 RNU6-871P-201ENST00000516122 100 ntBASIC-3.37□□□□□ -2.95
RPRD1AQ96P16 MIR5693-201ENST00000577722 73 ntBASIC-3.37□□□□□ -2.95
RPRD1AQ96P16 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.38□□□□□ -2.95
RPRD1AQ96P16 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.38□□□□□ -2.95
RPRD1AQ96P16 RNU6-300P-201ENST00000459080 104 ntBASIC-3.38□□□□□ -2.95
RPRD1AQ96P16 U6.111-201ENST00000636093 83 ntBASIC-3.39□□□□□ -2.95
RPRD1AQ96P16 AC103706.3-201ENST00000636297 85 ntBASIC-3.39□□□□□ -2.95
RPRD1AQ96P16 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.41□□□□□ -2.96
RPRD1AQ96P16 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.42□□□□□ -2.96
RPRD1AQ96P16 RNU6-176P-201ENST00000517196 105 ntBASIC-3.43□□□□□ -2.96
RPRD1AQ96P16 MIR3938-201ENST00000582157 103 ntBASIC-3.43□□□□□ -2.96
RPRD1AQ96P16 MIR3202-2-201ENST00000635980 79 ntBASIC-3.43□□□□□ -2.96
RPRD1AQ96P16 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.44□□□□□ -2.96
RPRD1AQ96P16 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.44□□□□□ -2.96
RPRD1AQ96P16 RNU6-803P-201ENST00000516034 102 ntBASIC-3.44□□□□□ -2.96
RPRD1AQ96P16 RNU6-539P-201ENST00000516665 103 ntBASIC-3.44□□□□□ -2.96
RPRD1AQ96P16 RNU6-419P-201ENST00000517030 63 ntBASIC-3.45□□□□□ -2.96
RPRD1AQ96P16 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.46□□□□□ -2.96
RPRD1AQ96P16 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.46□□□□□ -2.96
RPRD1AQ96P16 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.47□□□□□ -2.96
RPRD1AQ96P16 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.48□□□□□ -2.97
RPRD1AQ96P16 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.49□□□□□ -2.97
RPRD1AQ96P16 RNU6-742P-201ENST00000365289 107 ntBASIC-3.49□□□□□ -2.97
RPRD1AQ96P16 RNU6-857P-201ENST00000515893 110 ntBASIC-3.49□□□□□ -2.97
RPRD1AQ96P16 RNY4P25-201ENST00000459254 96 ntBASIC-3.5□□□□□ -2.97
RPRD1AQ96P16 AL731768.1-201ENST00000603124 139 ntBASIC-3.51□□□□□ -2.97
RPRD1AQ96P16 RNU6-345P-201ENST00000517001 107 ntBASIC-3.52□□□□□ -2.97
RPRD1AQ96P16 MIR4679-1-201ENST00000637619 75 ntBASIC-3.52□□□□□ -2.97
RPRD1AQ96P16 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.55□□□□□ -2.98
RPRD1AQ96P16 RNU6-279P-201ENST00000391297 101 ntBASIC-3.55□□□□□ -2.98
RPRD1AQ96P16 MIR1255A-201ENST00000408338 113 ntBASIC-3.56□□□□□ -2.98
RPRD1AQ96P16 U2.22-201ENST00000636441 106 ntBASIC-3.56□□□□□ -2.98
RPRD1AQ96P16 RNU6-800P-201ENST00000384473 103 ntBASIC-3.57□□□□□ -2.98
RPRD1AQ96P16 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.57□□□□□ -2.98
RPRD1AQ96P16 RNU6-573P-201ENST00000383938 106 ntBASIC-3.58□□□□□ -2.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms