Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.8□□□□□ -2.86
ECHDC3Q96DC8 U6.97-201ENST00000636904 101 ntBASIC-2.8□□□□□ -2.86
ECHDC3Q96DC8 RNU6-49P-201ENST00000384256 107 ntBASIC-2.81□□□□□ -2.86
ECHDC3Q96DC8 MT-TR-201ENST00000387439 65 ntBASIC-2.81□□□□□ -2.86
ECHDC3Q96DC8 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.82□□□□□ -2.86
ECHDC3Q96DC8 SNORD114-13-201ENST00000364377 74 ntBASIC-2.83□□□□□ -2.86
ECHDC3Q96DC8 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.83□□□□□ -2.86
ECHDC3Q96DC8 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.83□□□□□ -2.86
ECHDC3Q96DC8 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 SNORD18C-201ENST00000362704 69 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 RNU6-687P-201ENST00000516443 89 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 RNU6-215P-201ENST00000365169 102 ntBASIC-2.85□□□□□ -2.87
ECHDC3Q96DC8 MIR3134-201ENST00000579433 74 ntBASIC-2.85□□□□□ -2.87
ECHDC3Q96DC8 SNORD60.1-201ENST00000362451 73 ntBASIC-2.86□□□□□ -2.87
ECHDC3Q96DC8 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.86□□□□□ -2.87
ECHDC3Q96DC8 RNU6-828P-201ENST00000364876 107 ntBASIC-2.86□□□□□ -2.87
ECHDC3Q96DC8 RNU6-520P-201ENST00000384717 104 ntBASIC-2.87□□□□□ -2.87
ECHDC3Q96DC8 MIR7110-201ENST00000612638 86 ntBASIC-2.87□□□□□ -2.87
ECHDC3Q96DC8 RNU6-919P-201ENST00000516731 104 ntBASIC-2.88□□□□□ -2.87
ECHDC3Q96DC8 AL731768.1-201ENST00000603124 139 ntBASIC-2.89□□□□□ -2.87
ECHDC3Q96DC8 SNORD113-3-201ENST00000364830 72 ntBASIC-2.9□□□□□ -2.87
ECHDC3Q96DC8 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.91□□□□□ -2.88
ECHDC3Q96DC8 MIR581-201ENST00000384895 96 ntBASIC-2.91□□□□□ -2.88
ECHDC3Q96DC8 RNU6-231P-201ENST00000517122 103 ntBASIC-2.91□□□□□ -2.88
ECHDC3Q96DC8 SNORD60-201ENST00000383903 83 ntBASIC-2.92□□□□□ -2.88
ECHDC3Q96DC8 SNORD20-201ENST00000384550 80 ntBASIC-2.92□□□□□ -2.88
ECHDC3Q96DC8 MIR548N-201ENST00000408742 75 ntBASIC-2.92□□□□□ -2.88
ECHDC3Q96DC8 RNU6-810P-201ENST00000364001 107 ntBASIC-2.94□□□□□ -2.88
ECHDC3Q96DC8 MIR4666B-201ENST00000578142 81 ntBASIC-2.94□□□□□ -2.88
ECHDC3Q96DC8 RNU6-1128P-201ENST00000362825 109 ntBASIC-2.95□□□□□ -2.88
ECHDC3Q96DC8 RNA5SP89-201ENST00000410300 108 ntBASIC-2.96□□□□□ -2.88
ECHDC3Q96DC8 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.96□□□□□ -2.88
ECHDC3Q96DC8 MIR202-201ENST00000362219 110 ntBASIC-2.97□□□□□ -2.88
ECHDC3Q96DC8 RNU6-361P-201ENST00000364454 107 ntBASIC-2.97□□□□□ -2.88
ECHDC3Q96DC8 RNU6-411P-201ENST00000384451 107 ntBASIC-2.97□□□□□ -2.88
ECHDC3Q96DC8 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.98□□□□□ -2.89
ECHDC3Q96DC8 RNU6-242P-201ENST00000384359 107 ntBASIC-2.99□□□□□ -2.89
ECHDC3Q96DC8 RNU6-649P-201ENST00000384463 107 ntBASIC-2.99□□□□□ -2.89
ECHDC3Q96DC8 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.99□□□□□ -2.89
ECHDC3Q96DC8 SNORA17.4-201ENST00000391287 132 ntBASIC-3□□□□□ -2.89
ECHDC3Q96DC8 RNU6-1015P-201ENST00000517121 99 ntBASIC-3□□□□□ -2.89
ECHDC3Q96DC8 SNORA40B-201ENST00000385573 128 ntBASIC-3.01□□□□□ -2.89
ECHDC3Q96DC8 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.01□□□□□ -2.89
ECHDC3Q96DC8 SNORD116.2-201ENST00000391251 93 ntBASIC-3.02□□□□□ -2.89
ECHDC3Q96DC8 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.02□□□□□ -2.89
ECHDC3Q96DC8 RNU6-634P-201ENST00000459134 106 ntBASIC-3.03□□□□□ -2.89
ECHDC3Q96DC8 RNU6-122P-201ENST00000516818 107 ntBASIC-3.03□□□□□ -2.89
ECHDC3Q96DC8 MIR494-201ENST00000349529 81 ntBASIC-3.04□□□□□ -2.9
ECHDC3Q96DC8 RNU6-787P-201ENST00000384032 107 ntBASIC-3.04□□□□□ -2.9
ECHDC3Q96DC8 AL606753.1-201ENST00000427435 87 ntBASIC-3.04□□□□□ -2.9
ECHDC3Q96DC8 AL359920.1-201ENST00000618332 176 ntBASIC-3.04□□□□□ -2.9
ECHDC3Q96DC8 MIR450A2-201ENST00000385022 100 ntBASIC-3.05□□□□□ -2.9
ECHDC3Q96DC8 RNU6-44P-201ENST00000384045 107 ntBASIC-3.06□□□□□ -2.9
ECHDC3Q96DC8 SNORA40.16-201ENST00000517238 121 ntBASIC-3.06□□□□□ -2.9
ECHDC3Q96DC8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.06□□□□□ -2.9
ECHDC3Q96DC8 SNORA25.5-201ENST00000363782 126 ntBASIC-3.07□□□□□ -2.9
ECHDC3Q96DC8 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.08□□□□□ -2.9
ECHDC3Q96DC8 RNU6-800P-201ENST00000384473 103 ntBASIC-3.08□□□□□ -2.9
ECHDC3Q96DC8 RNU6-663P-201ENST00000391105 106 ntBASIC-3.08□□□□□ -2.9
ECHDC3Q96DC8 U7.4-201ENST00000614961 63 ntBASIC-3.08□□□□□ -2.9
ECHDC3Q96DC8 RNY4P30-201ENST00000410216 95 ntBASIC-3.09□□□□□ -2.9
ECHDC3Q96DC8 RNU6-665P-201ENST00000384639 107 ntBASIC-3.11□□□□□ -2.91
ECHDC3Q96DC8 RNU6-530P-201ENST00000391180 107 ntBASIC-3.11□□□□□ -2.91
ECHDC3Q96DC8 RNU7-119P-201ENST00000459279 63 ntBASIC-3.11□□□□□ -2.91
ECHDC3Q96DC8 RNU6-153P-201ENST00000364422 104 ntBASIC-3.12□□□□□ -2.91
ECHDC3Q96DC8 SNORD45.2-201ENST00000363552 72 ntBASIC-3.13□□□□□ -2.91
ECHDC3Q96DC8 SNORA25.4-201ENST00000363666 124 ntBASIC-3.13□□□□□ -2.91
ECHDC3Q96DC8 AL451105.1-201ENST00000450005 189 ntBASIC-3.13□□□□□ -2.91
ECHDC3Q96DC8 MIR379-201ENST00000362218 67 ntBASIC-3.15□□□□□ -2.91
ECHDC3Q96DC8 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.15□□□□□ -2.91
ECHDC3Q96DC8 RNU6-294P-201ENST00000364999 102 ntBASIC-3.16□□□□□ -2.92
ECHDC3Q96DC8 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.16□□□□□ -2.92
ECHDC3Q96DC8 RNU6-68P-201ENST00000516576 104 ntBASIC-3.16□□□□□ -2.92
ECHDC3Q96DC8 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.16□□□□□ -2.92
ECHDC3Q96DC8 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.16□□□□□ -2.92
ECHDC3Q96DC8 RNU6-820P-201ENST00000384273 107 ntBASIC-3.17□□□□□ -2.92
ECHDC3Q96DC8 MIR4426-201ENST00000640330 63 ntBASIC-3.18□□□□□ -2.92
ECHDC3Q96DC8 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.2□□□□□ -2.92
ECHDC3Q96DC8 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.22□□□□□ -2.92
ECHDC3Q96DC8 RNY4P13-201ENST00000384284 96 ntBASIC-3.22□□□□□ -2.92
ECHDC3Q96DC8 RNU6-176P-201ENST00000517196 105 ntBASIC-3.22□□□□□ -2.92
ECHDC3Q96DC8 MIR4511-201ENST00000582784 87 ntBASIC-3.22□□□□□ -2.92
ECHDC3Q96DC8 RNU6-940P-201ENST00000363433 104 ntBASIC-3.24□□□□□ -2.93
ECHDC3Q96DC8 RNU6-590P-201ENST00000365039 107 ntBASIC-3.24□□□□□ -2.93
ECHDC3Q96DC8 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.24□□□□□ -2.93
ECHDC3Q96DC8 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.24□□□□□ -2.93
ECHDC3Q96DC8 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.24□□□□□ -2.93
ECHDC3Q96DC8 SNORD115-45-201ENST00000391078 81 ntBASIC-3.24□□□□□ -2.93
ECHDC3Q96DC8 SNORD30.1-201ENST00000391309 70 ntBASIC-3.25□□□□□ -2.93
ECHDC3Q96DC8 RNU6-300P-201ENST00000459080 104 ntBASIC-3.25□□□□□ -2.93
ECHDC3Q96DC8 RNU6-912P-201ENST00000363800 104 ntBASIC-3.26□□□□□ -2.93
ECHDC3Q96DC8 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.26□□□□□ -2.93
ECHDC3Q96DC8 AC103706.3-201ENST00000636297 85 ntBASIC-3.26□□□□□ -2.93
ECHDC3Q96DC8 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.27□□□□□ -2.93
ECHDC3Q96DC8 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.27□□□□□ -2.93
ECHDC3Q96DC8 RNU6-419P-201ENST00000517030 63 ntBASIC-3.27□□□□□ -2.93
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms