Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.8□□□□□ -2.86
ECHDC3Q96DC8 U6.97-201ENST00000636904 101 ntBASIC-2.8□□□□□ -2.86
ECHDC3Q96DC8 RNU6-49P-201ENST00000384256 107 ntBASIC-2.81□□□□□ -2.86
ECHDC3Q96DC8 MT-TR-201ENST00000387439 65 ntBASIC-2.81□□□□□ -2.86
ECHDC3Q96DC8 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.82□□□□□ -2.86
ECHDC3Q96DC8 SNORD114-13-201ENST00000364377 74 ntBASIC-2.83□□□□□ -2.86
ECHDC3Q96DC8 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.83□□□□□ -2.86
ECHDC3Q96DC8 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.83□□□□□ -2.86
ECHDC3Q96DC8 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 SNORD18C-201ENST00000362704 69 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 RNU6-687P-201ENST00000516443 89 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.84□□□□□ -2.86
ECHDC3Q96DC8 RNU6-215P-201ENST00000365169 102 ntBASIC-2.85□□□□□ -2.87
ECHDC3Q96DC8 MIR3134-201ENST00000579433 74 ntBASIC-2.85□□□□□ -2.87
ECHDC3Q96DC8 SNORD60.1-201ENST00000362451 73 ntBASIC-2.86□□□□□ -2.87
ECHDC3Q96DC8 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.86□□□□□ -2.87
ECHDC3Q96DC8 RNU6-828P-201ENST00000364876 107 ntBASIC-2.86□□□□□ -2.87
ECHDC3Q96DC8 RNU6-520P-201ENST00000384717 104 ntBASIC-2.87□□□□□ -2.87
ECHDC3Q96DC8 MIR7110-201ENST00000612638 86 ntBASIC-2.87□□□□□ -2.87
ECHDC3Q96DC8 RNU6-919P-201ENST00000516731 104 ntBASIC-2.88□□□□□ -2.87
ECHDC3Q96DC8 AL731768.1-201ENST00000603124 139 ntBASIC-2.89□□□□□ -2.87
ECHDC3Q96DC8 SNORD113-3-201ENST00000364830 72 ntBASIC-2.9□□□□□ -2.87
ECHDC3Q96DC8 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.91□□□□□ -2.88
ECHDC3Q96DC8 MIR581-201ENST00000384895 96 ntBASIC-2.91□□□□□ -2.88
ECHDC3Q96DC8 RNU6-231P-201ENST00000517122 103 ntBASIC-2.91□□□□□ -2.88
ECHDC3Q96DC8 SNORD60-201ENST00000383903 83 ntBASIC-2.92□□□□□ -2.88
ECHDC3Q96DC8 SNORD20-201ENST00000384550 80 ntBASIC-2.92□□□□□ -2.88
ECHDC3Q96DC8 MIR548N-201ENST00000408742 75 ntBASIC-2.92□□□□□ -2.88
ECHDC3Q96DC8 RNU6-810P-201ENST00000364001 107 ntBASIC-2.94□□□□□ -2.88
ECHDC3Q96DC8 MIR4666B-201ENST00000578142 81 ntBASIC-2.94□□□□□ -2.88
ECHDC3Q96DC8 RNU6-1128P-201ENST00000362825 109 ntBASIC-2.95□□□□□ -2.88
ECHDC3Q96DC8 RNA5SP89-201ENST00000410300 108 ntBASIC-2.96□□□□□ -2.88
ECHDC3Q96DC8 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.96□□□□□ -2.88
ECHDC3Q96DC8 MIR202-201ENST00000362219 110 ntBASIC-2.97□□□□□ -2.88
ECHDC3Q96DC8 RNU6-361P-201ENST00000364454 107 ntBASIC-2.97□□□□□ -2.88
ECHDC3Q96DC8 RNU6-411P-201ENST00000384451 107 ntBASIC-2.97□□□□□ -2.88
ECHDC3Q96DC8 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.98□□□□□ -2.89
ECHDC3Q96DC8 RNU6-242P-201ENST00000384359 107 ntBASIC-2.99□□□□□ -2.89
ECHDC3Q96DC8 RNU6-649P-201ENST00000384463 107 ntBASIC-2.99□□□□□ -2.89
ECHDC3Q96DC8 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.99□□□□□ -2.89
ECHDC3Q96DC8 SNORA17.4-201ENST00000391287 132 ntBASIC-3□□□□□ -2.89
ECHDC3Q96DC8 RNU6-1015P-201ENST00000517121 99 ntBASIC-3□□□□□ -2.89
ECHDC3Q96DC8 SNORA40B-201ENST00000385573 128 ntBASIC-3.01□□□□□ -2.89
ECHDC3Q96DC8 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.01□□□□□ -2.89
ECHDC3Q96DC8 SNORD116.2-201ENST00000391251 93 ntBASIC-3.02□□□□□ -2.89
ECHDC3Q96DC8 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.02□□□□□ -2.89
ECHDC3Q96DC8 RNU6-634P-201ENST00000459134 106 ntBASIC-3.03□□□□□ -2.89
ECHDC3Q96DC8 RNU6-122P-201ENST00000516818 107 ntBASIC-3.03□□□□□ -2.89
ECHDC3Q96DC8 MIR494-201ENST00000349529 81 ntBASIC-3.04□□□□□ -2.9
ECHDC3Q96DC8 RNU6-787P-201ENST00000384032 107 ntBASIC-3.04□□□□□ -2.9
ECHDC3Q96DC8 AL606753.1-201ENST00000427435 87 ntBASIC-3.04□□□□□ -2.9
ECHDC3Q96DC8 AL359920.1-201ENST00000618332 176 ntBASIC-3.04□□□□□ -2.9
ECHDC3Q96DC8 MIR450A2-201ENST00000385022 100 ntBASIC-3.05□□□□□ -2.9
ECHDC3Q96DC8 RNU6-44P-201ENST00000384045 107 ntBASIC-3.06□□□□□ -2.9
ECHDC3Q96DC8 SNORA40.16-201ENST00000517238 121 ntBASIC-3.06□□□□□ -2.9
ECHDC3Q96DC8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.06□□□□□ -2.9
ECHDC3Q96DC8 SNORA25.5-201ENST00000363782 126 ntBASIC-3.07□□□□□ -2.9
ECHDC3Q96DC8 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.08□□□□□ -2.9
ECHDC3Q96DC8 RNU6-800P-201ENST00000384473 103 ntBASIC-3.08□□□□□ -2.9
ECHDC3Q96DC8 RNU6-663P-201ENST00000391105 106 ntBASIC-3.08□□□□□ -2.9
ECHDC3Q96DC8 U7.4-201ENST00000614961 63 ntBASIC-3.08□□□□□ -2.9
ECHDC3Q96DC8 RNY4P30-201ENST00000410216 95 ntBASIC-3.09□□□□□ -2.9
ECHDC3Q96DC8 RNU6-665P-201ENST00000384639 107 ntBASIC-3.11□□□□□ -2.91
ECHDC3Q96DC8 RNU6-530P-201ENST00000391180 107 ntBASIC-3.11□□□□□ -2.91
ECHDC3Q96DC8 RNU7-119P-201ENST00000459279 63 ntBASIC-3.11□□□□□ -2.91
ECHDC3Q96DC8 RNU6-153P-201ENST00000364422 104 ntBASIC-3.12□□□□□ -2.91
ECHDC3Q96DC8 SNORD45.2-201ENST00000363552 72 ntBASIC-3.13□□□□□ -2.91
ECHDC3Q96DC8 SNORA25.4-201ENST00000363666 124 ntBASIC-3.13□□□□□ -2.91
ECHDC3Q96DC8 AL451105.1-201ENST00000450005 189 ntBASIC-3.13□□□□□ -2.91
ECHDC3Q96DC8 MIR379-201ENST00000362218 67 ntBASIC-3.15□□□□□ -2.91
ECHDC3Q96DC8 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.15□□□□□ -2.91
ECHDC3Q96DC8 RNU6-294P-201ENST00000364999 102 ntBASIC-3.16□□□□□ -2.92
ECHDC3Q96DC8 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.16□□□□□ -2.92
ECHDC3Q96DC8 RNU6-68P-201ENST00000516576 104 ntBASIC-3.16□□□□□ -2.92
ECHDC3Q96DC8 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.16□□□□□ -2.92
ECHDC3Q96DC8 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.16□□□□□ -2.92
ECHDC3Q96DC8 RNU6-820P-201ENST00000384273 107 ntBASIC-3.17□□□□□ -2.92
ECHDC3Q96DC8 MIR4426-201ENST00000640330 63 ntBASIC-3.18□□□□□ -2.92
ECHDC3Q96DC8 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.2□□□□□ -2.92
ECHDC3Q96DC8 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.22□□□□□ -2.92
ECHDC3Q96DC8 RNY4P13-201ENST00000384284 96 ntBASIC-3.22□□□□□ -2.92
ECHDC3Q96DC8 RNU6-176P-201ENST00000517196 105 ntBASIC-3.22□□□□□ -2.92
ECHDC3Q96DC8 MIR4511-201ENST00000582784 87 ntBASIC-3.22□□□□□ -2.92
ECHDC3Q96DC8 RNU6-940P-201ENST00000363433 104 ntBASIC-3.24□□□□□ -2.93
ECHDC3Q96DC8 RNU6-590P-201ENST00000365039 107 ntBASIC-3.24□□□□□ -2.93
ECHDC3Q96DC8 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.24□□□□□ -2.93
ECHDC3Q96DC8 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.24□□□□□ -2.93
ECHDC3Q96DC8 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.24□□□□□ -2.93
ECHDC3Q96DC8 SNORD115-45-201ENST00000391078 81 ntBASIC-3.24□□□□□ -2.93
ECHDC3Q96DC8 SNORD30.1-201ENST00000391309 70 ntBASIC-3.25□□□□□ -2.93
ECHDC3Q96DC8 RNU6-300P-201ENST00000459080 104 ntBASIC-3.25□□□□□ -2.93
ECHDC3Q96DC8 RNU6-912P-201ENST00000363800 104 ntBASIC-3.26□□□□□ -2.93
ECHDC3Q96DC8 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.26□□□□□ -2.93
ECHDC3Q96DC8 AC103706.3-201ENST00000636297 85 ntBASIC-3.26□□□□□ -2.93
ECHDC3Q96DC8 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.27□□□□□ -2.93
ECHDC3Q96DC8 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.27□□□□□ -2.93
ECHDC3Q96DC8 RNU6-419P-201ENST00000517030 63 ntBASIC-3.27□□□□□ -2.93
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms