Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.64□□□□□ -2.67
LMX1AQ8TE12 SNORA25.5-201ENST00000363782 126 ntBASIC-1.65□□□□□ -2.67
LMX1AQ8TE12 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.65□□□□□ -2.67
LMX1AQ8TE12 RNU6-215P-201ENST00000365169 102 ntBASIC-1.65□□□□□ -2.67
LMX1AQ8TE12 RNU6-411P-201ENST00000384451 107 ntBASIC-1.65□□□□□ -2.67
LMX1AQ8TE12 SNORD20-201ENST00000384550 80 ntBASIC-1.65□□□□□ -2.67
LMX1AQ8TE12 MIR496-201ENST00000385226 102 ntBASIC-1.65□□□□□ -2.67
LMX1AQ8TE12 MIR1254-1-201ENST00000408257 97 ntBASIC-1.65□□□□□ -2.67
LMX1AQ8TE12 AL451105.1-201ENST00000450005 189 ntBASIC-1.65□□□□□ -2.67
LMX1AQ8TE12 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.65□□□□□ -2.67
LMX1AQ8TE12 MIR4666B-201ENST00000578142 81 ntBASIC-1.65□□□□□ -2.67
LMX1AQ8TE12 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.66□□□□□ -2.68
LMX1AQ8TE12 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.66□□□□□ -2.68
LMX1AQ8TE12 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.67□□□□□ -2.68
LMX1AQ8TE12 RNU6-663P-201ENST00000391105 106 ntBASIC-1.67□□□□□ -2.68
LMX1AQ8TE12 RNU6-634P-201ENST00000459134 106 ntBASIC-1.67□□□□□ -2.68
LMX1AQ8TE12 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.67□□□□□ -2.68
LMX1AQ8TE12 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.68□□□□□ -2.68
LMX1AQ8TE12 RNU6-590P-201ENST00000365039 107 ntBASIC-1.68□□□□□ -2.68
LMX1AQ8TE12 SNORD113-1-201ENST00000365321 69 ntBASIC-1.68□□□□□ -2.68
LMX1AQ8TE12 MIR3910-1-201ENST00000580936 111 ntBASIC-1.68□□□□□ -2.68
LMX1AQ8TE12 RNU6-44P-201ENST00000384045 107 ntBASIC-1.7□□□□□ -2.68
LMX1AQ8TE12 snosnR66.1-201ENST00000391095 99 ntBASIC-1.7□□□□□ -2.68
LMX1AQ8TE12 RNU6-300P-201ENST00000459080 104 ntBASIC-1.7□□□□□ -2.68
LMX1AQ8TE12 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.71□□□□□ -2.68
LMX1AQ8TE12 AC062037.1-201ENST00000605302 128 ntBASIC-1.72□□□□□ -2.68
LMX1AQ8TE12 SNORA25.4-201ENST00000363666 124 ntBASIC-1.73□□□□□ -2.69
LMX1AQ8TE12 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.73□□□□□ -2.69
LMX1AQ8TE12 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.73□□□□□ -2.69
LMX1AQ8TE12 RNY4P30-201ENST00000410216 95 ntBASIC-1.73□□□□□ -2.69
LMX1AQ8TE12 RNU6-419P-201ENST00000517030 63 ntBASIC-1.73□□□□□ -2.69
LMX1AQ8TE12 RNU6-919P-201ENST00000516731 104 ntBASIC-1.74□□□□□ -2.69
LMX1AQ8TE12 MIR379-201ENST00000362218 67 ntBASIC-1.75□□□□□ -2.69
LMX1AQ8TE12 RNY4P9-201ENST00000363194 97 ntBASIC-1.75□□□□□ -2.69
LMX1AQ8TE12 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.75□□□□□ -2.69
LMX1AQ8TE12 MIR4511-201ENST00000582784 87 ntBASIC-1.75□□□□□ -2.69
LMX1AQ8TE12 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.75□□□□□ -2.69
LMX1AQ8TE12 RNU6-153P-201ENST00000364422 104 ntBASIC-1.76□□□□□ -2.69
LMX1AQ8TE12 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.76□□□□□ -2.69
LMX1AQ8TE12 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.76□□□□□ -2.69
LMX1AQ8TE12 MIR450A2-201ENST00000385022 100 ntBASIC-1.76□□□□□ -2.69
LMX1AQ8TE12 MIR548M-201ENST00000408260 86 ntBASIC-1.76□□□□□ -2.69
LMX1AQ8TE12 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.77□□□□□ -2.69
LMX1AQ8TE12 RNU6-242P-201ENST00000384359 107 ntBASIC-1.77□□□□□ -2.69
LMX1AQ8TE12 U7.4-201ENST00000614961 63 ntBASIC-1.77□□□□□ -2.69
LMX1AQ8TE12 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.78□□□□□ -2.69
LMX1AQ8TE12 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.78□□□□□ -2.69
LMX1AQ8TE12 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.78□□□□□ -2.69
LMX1AQ8TE12 SNORD30.1-201ENST00000391309 70 ntBASIC-1.78□□□□□ -2.69
LMX1AQ8TE12 RNU7-119P-201ENST00000459279 63 ntBASIC-1.78□□□□□ -2.69
LMX1AQ8TE12 U6.111-201ENST00000636093 83 ntBASIC-1.78□□□□□ -2.69
LMX1AQ8TE12 RNU6-294P-201ENST00000364999 102 ntBASIC-1.79□□□□□ -2.7
LMX1AQ8TE12 MIR3938-201ENST00000582157 103 ntBASIC-1.79□□□□□ -2.7
LMX1AQ8TE12 RNU6-406P-201ENST00000516470 107 ntBASIC-1.8□□□□□ -2.7
LMX1AQ8TE12 RNU6-446P-201ENST00000362827 106 ntBASIC-1.81□□□□□ -2.7
LMX1AQ8TE12 AL606753.1-201ENST00000427435 87 ntBASIC-1.81□□□□□ -2.7
LMX1AQ8TE12 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.82□□□□□ -2.7
LMX1AQ8TE12 RNU6-800P-201ENST00000384473 103 ntBASIC-1.82□□□□□ -2.7
LMX1AQ8TE12 MIR3668-201ENST00000582138 75 ntBASIC-1.82□□□□□ -2.7
LMX1AQ8TE12 AL731768.1-201ENST00000603124 139 ntBASIC-1.82□□□□□ -2.7
LMX1AQ8TE12 RNU6-230P-201ENST00000362457 104 ntBASIC-1.83□□□□□ -2.7
LMX1AQ8TE12 RNU6-940P-201ENST00000363433 104 ntBASIC-1.83□□□□□ -2.7
LMX1AQ8TE12 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.83□□□□□ -2.7
LMX1AQ8TE12 MIR5693-201ENST00000577722 73 ntBASIC-1.83□□□□□ -2.7
LMX1AQ8TE12 MIR5582-201ENST00000579697 68 ntBASIC-1.83□□□□□ -2.7
LMX1AQ8TE12 MIR3671-201ENST00000580455 88 ntBASIC-1.83□□□□□ -2.7
LMX1AQ8TE12 SNORD45.2-201ENST00000363552 72 ntBASIC-1.84□□□□□ -2.7
LMX1AQ8TE12 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.84□□□□□ -2.7
LMX1AQ8TE12 MIR548H4-201ENST00000408689 111 ntBASIC-1.84□□□□□ -2.7
LMX1AQ8TE12 AC110620.1-201ENST00000416042 228 ntBASIC-1.84□□□□□ -2.7
LMX1AQ8TE12 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.85□□□□□ -2.71
LMX1AQ8TE12 RNU6-854P-201ENST00000364036 107 ntBASIC-1.85□□□□□ -2.71
LMX1AQ8TE12 SNORD113-4-201ENST00000364802 75 ntBASIC-1.85□□□□□ -2.71
LMX1AQ8TE12 RNU6-573P-201ENST00000383938 106 ntBASIC-1.85□□□□□ -2.71
LMX1AQ8TE12 RNU6-345P-201ENST00000517001 107 ntBASIC-1.85□□□□□ -2.71
LMX1AQ8TE12 AC103706.3-201ENST00000636297 85 ntBASIC-1.85□□□□□ -2.71
LMX1AQ8TE12 RNA5SP93-201ENST00000362525 114 ntBASIC-1.86□□□□□ -2.71
LMX1AQ8TE12 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.86□□□□□ -2.71
LMX1AQ8TE12 RNU6-119P-201ENST00000364882 107 ntBASIC-1.86□□□□□ -2.71
LMX1AQ8TE12 RNU6-857P-201ENST00000515893 110 ntBASIC-1.86□□□□□ -2.71
LMX1AQ8TE12 RNU6-176P-201ENST00000517196 105 ntBASIC-1.86□□□□□ -2.71
LMX1AQ8TE12 MIR548X-201ENST00000580069 75 ntBASIC-1.86□□□□□ -2.71
LMX1AQ8TE12 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.87□□□□□ -2.71
LMX1AQ8TE12 MIR1255A-201ENST00000408338 113 ntBASIC-1.87□□□□□ -2.71
LMX1AQ8TE12 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.88□□□□□ -2.71
LMX1AQ8TE12 RNA5SP225-201ENST00000410874 135 ntBASIC-1.88□□□□□ -2.71
LMX1AQ8TE12 RNU6-539P-201ENST00000516665 103 ntBASIC-1.88□□□□□ -2.71
LMX1AQ8TE12 RNU6-820P-201ENST00000384273 107 ntBASIC-1.89□□□□□ -2.71
LMX1AQ8TE12 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.9□□□□□ -2.71
LMX1AQ8TE12 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.9□□□□□ -2.71
LMX1AQ8TE12 RNU6-279P-201ENST00000391297 101 ntBASIC-1.9□□□□□ -2.71
LMX1AQ8TE12 SNORD54-201ENST00000459159 67 ntBASIC-1.9□□□□□ -2.71
LMX1AQ8TE12 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.9□□□□□ -2.71
LMX1AQ8TE12 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.91□□□□□ -2.72
LMX1AQ8TE12 RNA5SP224-201ENST00000365069 126 ntBASIC-1.91□□□□□ -2.72
LMX1AQ8TE12 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.91□□□□□ -2.72
LMX1AQ8TE12 AC139453.2-201ENST00000487255 133 ntBASIC-1.91□□□□□ -2.72
LMX1AQ8TE12 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.92□□□□□ -2.72
LMX1AQ8TE12 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.92□□□□□ -2.72
LMX1AQ8TE12 SNORD73B-201ENST00000364394 72 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms