Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.77□□□□□ -2.69
CLRN3Q8NCR9 MIR4441-201ENST00000582623 100 ntBASIC-1.77□□□□□ -2.69
CLRN3Q8NCR9 AC013734.1-201ENST00000619329 111 ntBASIC-1.77□□□□□ -2.69
CLRN3Q8NCR9 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.78□□□□□ -2.69
CLRN3Q8NCR9 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.78□□□□□ -2.69
CLRN3Q8NCR9 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.78□□□□□ -2.69
CLRN3Q8NCR9 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.78□□□□□ -2.69
CLRN3Q8NCR9 HLA-S-202ENST00000425174 53 ntBASIC-1.79□□□□□ -2.7
CLRN3Q8NCR9 MIR4426-201ENST00000640330 63 ntBASIC-1.8□□□□□ -2.7
CLRN3Q8NCR9 U4.2-201ENST00000618561 85 ntBASIC-1.81□□□□□ -2.7
CLRN3Q8NCR9 MIR1246-201ENST00000636535 73 ntBASIC-1.81□□□□□ -2.7
CLRN3Q8NCR9 RNU4-33P-201ENST00000364316 85 ntBASIC-1.83□□□□□ -2.7
CLRN3Q8NCR9 MIR8485-201ENST00000401372 91 ntBASIC-1.83□□□□□ -2.7
CLRN3Q8NCR9 U6.97-201ENST00000636904 101 ntBASIC-1.83□□□□□ -2.7
CLRN3Q8NCR9 MIR548N-201ENST00000408742 75 ntBASIC-1.84□□□□□ -2.7
CLRN3Q8NCR9 RNU6-176P-201ENST00000517196 105 ntBASIC-1.84□□□□□ -2.7
CLRN3Q8NCR9 MIR6502-201ENST00000617296 76 ntBASIC-1.84□□□□□ -2.7
CLRN3Q8NCR9 SNORD18C-201ENST00000362704 69 ntBASIC-1.85□□□□□ -2.71
CLRN3Q8NCR9 RNU6-695P-201ENST00000391157 104 ntBASIC-1.86□□□□□ -2.71
CLRN3Q8NCR9 SNORD114-3-201ENST00000364969 75 ntBASIC-1.87□□□□□ -2.71
CLRN3Q8NCR9 RNU6-980P-201ENST00000516925 103 ntBASIC-1.87□□□□□ -2.71
CLRN3Q8NCR9 MIR4723-201ENST00000585070 81 ntBASIC-1.87□□□□□ -2.71
CLRN3Q8NCR9 RNU6-226P-201ENST00000363778 107 ntBASIC-1.89□□□□□ -2.71
CLRN3Q8NCR9 RNU6-300P-201ENST00000459080 104 ntBASIC-1.89□□□□□ -2.71
CLRN3Q8NCR9 RNU6-614P-201ENST00000384369 107 ntBASIC-1.9□□□□□ -2.71
CLRN3Q8NCR9 U6.59-201ENST00000615686 107 ntBASIC-1.9□□□□□ -2.71
CLRN3Q8NCR9 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.91□□□□□ -2.72
CLRN3Q8NCR9 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.92□□□□□ -2.72
CLRN3Q8NCR9 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.92□□□□□ -2.72
CLRN3Q8NCR9 MIR4520-1-201ENST00000582609 70 ntBASIC-1.95□□□□□ -2.72
CLRN3Q8NCR9 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.96□□□□□ -2.72
CLRN3Q8NCR9 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.96□□□□□ -2.72
CLRN3Q8NCR9 RNU6-742P-201ENST00000365289 107 ntBASIC-1.96□□□□□ -2.72
CLRN3Q8NCR9 MIR1207-201ENST00000408249 87 ntBASIC-1.96□□□□□ -2.72
CLRN3Q8NCR9 MIR5591-201ENST00000578248 65 ntBASIC-1.96□□□□□ -2.72
CLRN3Q8NCR9 MIR4770-201ENST00000579149 58 ntBASIC-1.98□□□□□ -2.73
CLRN3Q8NCR9 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.98□□□□□ -2.73
CLRN3Q8NCR9 Y_RNA.129-201ENST00000363392 110 ntBASIC-2□□□□□ -2.73
CLRN3Q8NCR9 RNU6-936P-201ENST00000384005 107 ntBASIC-2.01□□□□□ -2.73
CLRN3Q8NCR9 MIR581-201ENST00000384895 96 ntBASIC-2.01□□□□□ -2.73
CLRN3Q8NCR9 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.02□□□□□ -2.73
CLRN3Q8NCR9 MIR3123-201ENST00000583417 75 ntBASIC-2.02□□□□□ -2.73
CLRN3Q8NCR9 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.03□□□□□ -2.73
CLRN3Q8NCR9 RNU6-808P-201ENST00000391233 108 ntBASIC-2.03□□□□□ -2.73
CLRN3Q8NCR9 MIR379-201ENST00000362218 67 ntBASIC-2.04□□□□□ -2.74
CLRN3Q8NCR9 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.04□□□□□ -2.74
CLRN3Q8NCR9 RNY4P27-201ENST00000363341 96 ntBASIC-2.05□□□□□ -2.74
CLRN3Q8NCR9 MIR548AL-201ENST00000578416 97 ntBASIC-2.05□□□□□ -2.74
CLRN3Q8NCR9 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.06□□□□□ -2.74
CLRN3Q8NCR9 MTND4LP19-201ENST00000403051 166 ntBASIC-2.06□□□□□ -2.74
CLRN3Q8NCR9 RNU6-841P-201ENST00000383872 107 ntBASIC-2.07□□□□□ -2.74
CLRN3Q8NCR9 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.09□□□□□ -2.74
CLRN3Q8NCR9 RNU6-838P-201ENST00000363399 108 ntBASIC-2.12□□□□□ -2.75
CLRN3Q8NCR9 RNU6-753P-201ENST00000363926 107 ntBASIC-2.12□□□□□ -2.75
CLRN3Q8NCR9 MIR4317-201ENST00000637586 65 ntBASIC-2.12□□□□□ -2.75
CLRN3Q8NCR9 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.13□□□□□ -2.75
CLRN3Q8NCR9 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.13□□□□□ -2.75
CLRN3Q8NCR9 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.14□□□□□ -2.75
CLRN3Q8NCR9 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.14□□□□□ -2.75
CLRN3Q8NCR9 MIR548H1-201ENST00000408610 102 ntBASIC-2.15□□□□□ -2.75
CLRN3Q8NCR9 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.15□□□□□ -2.75
CLRN3Q8NCR9 RNA5SP86-201ENST00000390869 98 ntBASIC-2.16□□□□□ -2.76
CLRN3Q8NCR9 RNU6-983P-201ENST00000516004 103 ntBASIC-2.18□□□□□ -2.76
CLRN3Q8NCR9 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.2□□□□□ -2.76
CLRN3Q8NCR9 MIR548AM-201ENST00000584298 74 ntBASIC-2.21□□□□□ -2.76
CLRN3Q8NCR9 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.22□□□□□ -2.76
CLRN3Q8NCR9 RNU6-68P-201ENST00000516576 104 ntBASIC-2.22□□□□□ -2.76
CLRN3Q8NCR9 RNU6-119P-201ENST00000364882 107 ntBASIC-2.27□□□□□ -2.77
CLRN3Q8NCR9 RNU6-930P-201ENST00000390938 100 ntBASIC-2.27□□□□□ -2.77
CLRN3Q8NCR9 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.27□□□□□ -2.77
CLRN3Q8NCR9 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.28□□□□□ -2.77
CLRN3Q8NCR9 RNU6-822P-201ENST00000362707 106 ntBASIC-2.29□□□□□ -2.78
CLRN3Q8NCR9 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.29□□□□□ -2.78
CLRN3Q8NCR9 snoU13.10-201ENST00000459301 103 ntBASIC-2.29□□□□□ -2.78
CLRN3Q8NCR9 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.29□□□□□ -2.78
CLRN3Q8NCR9 MIR548H4-201ENST00000408689 111 ntBASIC-2.3□□□□□ -2.78
CLRN3Q8NCR9 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.31□□□□□ -2.78
CLRN3Q8NCR9 MIR548W-201ENST00000581970 74 ntBASIC-2.31□□□□□ -2.78
CLRN3Q8NCR9 SNORD18.1-201ENST00000363807 70 ntBASIC-2.32□□□□□ -2.78
CLRN3Q8NCR9 MIR487B-201ENST00000385021 84 ntBASIC-2.32□□□□□ -2.78
CLRN3Q8NCR9 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.32□□□□□ -2.78
CLRN3Q8NCR9 RNU6-912P-201ENST00000363800 104 ntBASIC-2.33□□□□□ -2.78
CLRN3Q8NCR9 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.35□□□□□ -2.79
CLRN3Q8NCR9 RNU4-88P-201ENST00000411220 86 ntBASIC-2.37□□□□□ -2.79
CLRN3Q8NCR9 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.38□□□□□ -2.79
CLRN3Q8NCR9 MIR548F3-201ENST00000408509 87 ntBASIC-2.38□□□□□ -2.79
CLRN3Q8NCR9 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.39□□□□□ -2.79
CLRN3Q8NCR9 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.4□□□□□ -2.79
CLRN3Q8NCR9 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.4□□□□□ -2.79
CLRN3Q8NCR9 MIR496-201ENST00000385226 102 ntBASIC-2.41□□□□□ -2.8
CLRN3Q8NCR9 RNU6-141P-201ENST00000410499 105 ntBASIC-2.41□□□□□ -2.8
CLRN3Q8NCR9 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.41□□□□□ -2.8
CLRN3Q8NCR9 RNU6-987P-201ENST00000384759 104 ntBASIC-2.42□□□□□ -2.8
CLRN3Q8NCR9 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.43□□□□□ -2.8
CLRN3Q8NCR9 RNU4-37P-201ENST00000410214 84 ntBASIC-2.44□□□□□ -2.8
CLRN3Q8NCR9 AC097484.2-201ENST00000509147 251 ntBASIC-2.44□□□□□ -2.8
CLRN3Q8NCR9 RNU6-118P-201ENST00000516552 102 ntBASIC-2.46□□□□□ -2.8
CLRN3Q8NCR9 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.47□□□□□ -2.8
CLRN3Q8NCR9 DLEU2_4.2-201ENST00000616613 58 ntBASIC-2.47□□□□□ -2.8
CLRN3Q8NCR9 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.48□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 286.8 ms