Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.58□□□□□ -2.5
VRK3Q8IV63 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.58□□□□□ -2.5
VRK3Q8IV63 MT-TQ-201ENST00000387372 72 ntBASIC-0.58□□□□□ -2.5
VRK3Q8IV63 MIR196A1-201ENST00000388006 70 ntBASIC-0.58□□□□□ -2.5
VRK3Q8IV63 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.58□□□□□ -2.5
VRK3Q8IV63 SNORD18C-201ENST00000362704 69 ntBASIC-0.59□□□□□ -2.5
VRK3Q8IV63 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.59□□□□□ -2.5
VRK3Q8IV63 U6.97-201ENST00000636904 101 ntBASIC-0.59□□□□□ -2.5
VRK3Q8IV63 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.6□□□□□ -2.51
VRK3Q8IV63 RNA5SP331-201ENST00000364986 107 ntBASIC-0.62□□□□□ -2.51
VRK3Q8IV63 MIR379-201ENST00000362218 67 ntBASIC-0.64□□□□□ -2.51
VRK3Q8IV63 RNU6-576P-201ENST00000390854 102 ntBASIC-0.65□□□□□ -2.51
VRK3Q8IV63 RNA5SP266-201ENST00000410273 108 ntBASIC-0.65□□□□□ -2.51
VRK3Q8IV63 MIR4499-201ENST00000584834 69 ntBASIC-0.65□□□□□ -2.51
VRK3Q8IV63 RNU6-695P-201ENST00000391157 104 ntBASIC-0.67□□□□□ -2.52
VRK3Q8IV63 MIR8485-201ENST00000401372 91 ntBASIC-0.67□□□□□ -2.52
VRK3Q8IV63 AC091912.2-201ENST00000624798 167 ntBASIC-0.67□□□□□ -2.52
VRK3Q8IV63 MIR6874-201ENST00000635894 71 ntBASIC-0.68□□□□□ -2.52
VRK3Q8IV63 U6.103-201ENST00000637085 61 ntBASIC-0.68□□□□□ -2.52
VRK3Q8IV63 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.69□□□□□ -2.52
VRK3Q8IV63 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.69□□□□□ -2.52
VRK3Q8IV63 RNU6-400P-201ENST00000391173 106 ntBASIC-0.7□□□□□ -2.52
VRK3Q8IV63 uc_338.19-201ENST00000616808 99 ntBASIC-0.7□□□□□ -2.52
VRK3Q8IV63 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.72□□□□□ -2.52
VRK3Q8IV63 SNORD83B-201ENST00000386745 93 ntBASIC-0.72□□□□□ -2.52
VRK3Q8IV63 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.72□□□□□ -2.52
VRK3Q8IV63 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.73□□□□□ -2.53
VRK3Q8IV63 RNU6-724P-201ENST00000390958 105 ntBASIC-0.75□□□□□ -2.53
VRK3Q8IV63 MIR378F-201ENST00000578143 78 ntBASIC-0.75□□□□□ -2.53
VRK3Q8IV63 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.75□□□□□ -2.53
VRK3Q8IV63 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.76□□□□□ -2.53
VRK3Q8IV63 SCARNA17-201ENST00000516183 144 ntBASIC-0.76□□□□□ -2.53
VRK3Q8IV63 RNU6-912P-201ENST00000363800 104 ntBASIC-0.79□□□□□ -2.54
VRK3Q8IV63 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.79□□□□□ -2.54
VRK3Q8IV63 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.8□□□□□ -2.54
VRK3Q8IV63 MIR4324-201ENST00000584846 72 ntBASIC-0.8□□□□□ -2.54
VRK3Q8IV63 MIR6502-201ENST00000617296 76 ntBASIC-0.8□□□□□ -2.54
VRK3Q8IV63 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.81□□□□□ -2.54
VRK3Q8IV63 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.81□□□□□ -2.54
VRK3Q8IV63 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.81□□□□□ -2.54
VRK3Q8IV63 MIR587-201ENST00000384845 96 ntBASIC-0.81□□□□□ -2.54
VRK3Q8IV63 MIR6738-201ENST00000619620 64 ntBASIC-0.83□□□□□ -2.54
VRK3Q8IV63 SNX3P1X-201ENST00000414887 175 ntBASIC-0.84□□□□□ -2.54
VRK3Q8IV63 RNU6-10P-201ENST00000384036 107 ntBASIC-0.85□□□□□ -2.55
VRK3Q8IV63 MIR3123-201ENST00000583417 75 ntBASIC-0.85□□□□□ -2.55
VRK3Q8IV63 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.86□□□□□ -2.55
VRK3Q8IV63 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-0.86□□□□□ -2.55
VRK3Q8IV63 RNA5SP224-201ENST00000365069 126 ntBASIC-0.87□□□□□ -2.55
VRK3Q8IV63 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.87□□□□□ -2.55
VRK3Q8IV63 SNORD115.2-201ENST00000391126 59 ntBASIC-0.87□□□□□ -2.55
VRK3Q8IV63 MIR4320-201ENST00000636981 65 ntBASIC-0.87□□□□□ -2.55
VRK3Q8IV63 RNU6-836P-201ENST00000362920 107 ntBASIC-0.88□□□□□ -2.55
VRK3Q8IV63 MIR548H1-201ENST00000408610 102 ntBASIC-0.88□□□□□ -2.55
VRK3Q8IV63 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.89□□□□□ -2.55
VRK3Q8IV63 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.89□□□□□ -2.55
VRK3Q8IV63 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.89□□□□□ -2.55
VRK3Q8IV63 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.89□□□□□ -2.55
VRK3Q8IV63 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.9□□□□□ -2.55
VRK3Q8IV63 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.9□□□□□ -2.55
VRK3Q8IV63 MIR548W-201ENST00000581970 74 ntBASIC-0.9□□□□□ -2.55
VRK3Q8IV63 FTX_4.1-201ENST00000616291 147 ntBASIC-0.9□□□□□ -2.55
VRK3Q8IV63 RNA5SP461-201ENST00000516451 104 ntBASIC-0.92□□□□□ -2.56
VRK3Q8IV63 RNU6-226P-201ENST00000363778 107 ntBASIC-0.93□□□□□ -2.56
VRK3Q8IV63 MIR4306-201ENST00000583390 91 ntBASIC-0.93□□□□□ -2.56
VRK3Q8IV63 MIR198-201ENST00000637333 62 ntBASIC-0.93□□□□□ -2.56
VRK3Q8IV63 RNU6-841P-201ENST00000383872 107 ntBASIC-0.94□□□□□ -2.56
VRK3Q8IV63 SNORD111B-201ENST00000408587 80 ntBASIC-0.94□□□□□ -2.56
VRK3Q8IV63 snoU13.10-201ENST00000459301 103 ntBASIC-0.94□□□□□ -2.56
VRK3Q8IV63 RNU6-345P-201ENST00000517001 107 ntBASIC-0.94□□□□□ -2.56
VRK3Q8IV63 MIR3115-201ENST00000577915 68 ntBASIC-0.94□□□□□ -2.56
VRK3Q8IV63 MIR4520-1-201ENST00000582609 70 ntBASIC-0.94□□□□□ -2.56
VRK3Q8IV63 MIR601-201ENST00000385256 79 ntBASIC-0.95□□□□□ -2.56
VRK3Q8IV63 AC138207.3-201ENST00000585289 166 ntBASIC-0.95□□□□□ -2.56
VRK3Q8IV63 MIR487B-201ENST00000385021 84 ntBASIC-0.96□□□□□ -2.56
VRK3Q8IV63 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.96□□□□□ -2.56
VRK3Q8IV63 RNU6-485P-201ENST00000363475 107 ntBASIC-0.97□□□□□ -2.56
VRK3Q8IV63 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.99□□□□□ -2.57
VRK3Q8IV63 SNORD45C-201ENST00000383893 79 ntBASIC-0.99□□□□□ -2.57
VRK3Q8IV63 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.99□□□□□ -2.57
VRK3Q8IV63 MIR548AM-201ENST00000584298 74 ntBASIC-0.99□□□□□ -2.57
VRK3Q8IV63 Y_RNA.335-201ENST00000365299 96 ntBASIC-1□□□□□ -2.57
VRK3Q8IV63 MIR656-201ENST00000385224 78 ntBASIC-1.02□□□□□ -2.57
VRK3Q8IV63 MIR1254-1-201ENST00000408257 97 ntBASIC-1.02□□□□□ -2.57
VRK3Q8IV63 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.03□□□□□ -2.57
VRK3Q8IV63 MIR4723-201ENST00000585070 81 ntBASIC-1.03□□□□□ -2.57
VRK3Q8IV63 SNORD113-3-201ENST00000364830 72 ntBASIC-1.04□□□□□ -2.58
VRK3Q8IV63 RNU6-133P-201ENST00000383989 107 ntBASIC-1.04□□□□□ -2.58
VRK3Q8IV63 MIR5591-201ENST00000578248 65 ntBASIC-1.04□□□□□ -2.58
VRK3Q8IV63 RNA5SP86-201ENST00000390869 98 ntBASIC-1.05□□□□□ -2.58
VRK3Q8IV63 RNU6-706P-201ENST00000517229 104 ntBASIC-1.06□□□□□ -2.58
VRK3Q8IV63 HLA-S-202ENST00000425174 53 ntBASIC-1.07□□□□□ -2.58
VRK3Q8IV63 AC097484.2-201ENST00000509147 251 ntBASIC-1.07□□□□□ -2.58
VRK3Q8IV63 MIR3165-201ENST00000579874 75 ntBASIC-1.07□□□□□ -2.58
VRK3Q8IV63 U4.2-201ENST00000618561 85 ntBASIC-1.07□□□□□ -2.58
VRK3Q8IV63 MIR4770-201ENST00000579149 58 ntBASIC-1.08□□□□□ -2.58
VRK3Q8IV63 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.1□□□□□ -2.59
VRK3Q8IV63 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.11□□□□□ -2.59
VRK3Q8IV63 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.13□□□□□ -2.59
VRK3Q8IV63 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.13□□□□□ -2.59
VRK3Q8IV63 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms