Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 MIR4756-201ENST00000577874 78 ntBASIC-0.98□□□□□ -2.57
SNAI3Q3KNW1 MIR3123-201ENST00000583417 75 ntBASIC-0.98□□□□□ -2.57
SNAI3Q3KNW1 SNORD18.1-201ENST00000363807 70 ntBASIC-0.99□□□□□ -2.57
SNAI3Q3KNW1 RNA5SP25-201ENST00000410815 110 ntBASIC-0.99□□□□□ -2.57
SNAI3Q3KNW1 U6.97-201ENST00000636904 101 ntBASIC-0.99□□□□□ -2.57
SNAI3Q3KNW1 MIR4320-201ENST00000636981 65 ntBASIC-0.99□□□□□ -2.57
SNAI3Q3KNW1 Y_RNA.232-201ENST00000364369 96 ntBASIC-1□□□□□ -2.57
SNAI3Q3KNW1 MIR581-201ENST00000384895 96 ntBASIC-1.01□□□□□ -2.57
SNAI3Q3KNW1 MIR1246-201ENST00000636535 73 ntBASIC-1.01□□□□□ -2.57
SNAI3Q3KNW1 SNORD114-15-201ENST00000364687 72 ntBASIC-1.02□□□□□ -2.57
SNAI3Q3KNW1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.02□□□□□ -2.57
SNAI3Q3KNW1 RNU6-936P-201ENST00000384005 107 ntBASIC-1.02□□□□□ -2.57
SNAI3Q3KNW1 RNA5SP180-201ENST00000516181 101 ntBASIC-1.02□□□□□ -2.57
SNAI3Q3KNW1 MIR548AM-201ENST00000584298 74 ntBASIC-1.02□□□□□ -2.57
SNAI3Q3KNW1 SNORD18C-201ENST00000362704 69 ntBASIC-1.03□□□□□ -2.57
SNAI3Q3KNW1 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.03□□□□□ -2.57
SNAI3Q3KNW1 RNU6-30P-201ENST00000384561 107 ntBASIC-1.03□□□□□ -2.57
SNAI3Q3KNW1 MTND4LP19-201ENST00000403051 166 ntBASIC-1.03□□□□□ -2.57
SNAI3Q3KNW1 RNU6-300P-201ENST00000459080 104 ntBASIC-1.03□□□□□ -2.57
SNAI3Q3KNW1 RNU6-176P-201ENST00000517196 105 ntBASIC-1.03□□□□□ -2.57
SNAI3Q3KNW1 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.04□□□□□ -2.58
SNAI3Q3KNW1 RNU6-983P-201ENST00000516004 103 ntBASIC-1.04□□□□□ -2.58
SNAI3Q3KNW1 MIR548W-201ENST00000581970 74 ntBASIC-1.04□□□□□ -2.58
SNAI3Q3KNW1 MIR664B-201ENST00000626756 61 ntBASIC-1.04□□□□□ -2.58
SNAI3Q3KNW1 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.05□□□□□ -2.58
SNAI3Q3KNW1 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.06□□□□□ -2.58
SNAI3Q3KNW1 RNU6-808P-201ENST00000391233 108 ntBASIC-1.06□□□□□ -2.58
SNAI3Q3KNW1 MIR548AL-201ENST00000578416 97 ntBASIC-1.06□□□□□ -2.58
SNAI3Q3KNW1 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.07□□□□□ -2.58
SNAI3Q3KNW1 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.07□□□□□ -2.58
SNAI3Q3KNW1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.07□□□□□ -2.58
SNAI3Q3KNW1 snoU13.19-201ENST00000459148 104 ntBASIC-1.07□□□□□ -2.58
SNAI3Q3KNW1 RNA5SP67-201ENST00000516422 131 ntBASIC-1.07□□□□□ -2.58
SNAI3Q3KNW1 RNU6-838P-201ENST00000363399 108 ntBASIC-1.08□□□□□ -2.58
SNAI3Q3KNW1 RNU6-753P-201ENST00000363926 107 ntBASIC-1.08□□□□□ -2.58
SNAI3Q3KNW1 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.08□□□□□ -2.58
SNAI3Q3KNW1 snoU13.10-201ENST00000459301 103 ntBASIC-1.08□□□□□ -2.58
SNAI3Q3KNW1 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.08□□□□□ -2.58
SNAI3Q3KNW1 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.09□□□□□ -2.58
SNAI3Q3KNW1 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.09□□□□□ -2.58
SNAI3Q3KNW1 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.09□□□□□ -2.58
SNAI3Q3KNW1 MIR6086-201ENST00000638065 55 ntBASIC-1.1□□□□□ -2.59
SNAI3Q3KNW1 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.11□□□□□ -2.59
SNAI3Q3KNW1 RNU6-68P-201ENST00000516576 104 ntBASIC-1.11□□□□□ -2.59
SNAI3Q3KNW1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.11□□□□□ -2.59
SNAI3Q3KNW1 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.12□□□□□ -2.59
SNAI3Q3KNW1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.12□□□□□ -2.59
SNAI3Q3KNW1 MIR379-201ENST00000362218 67 ntBASIC-1.13□□□□□ -2.59
SNAI3Q3KNW1 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.13□□□□□ -2.59
SNAI3Q3KNW1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.13□□□□□ -2.59
SNAI3Q3KNW1 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.13□□□□□ -2.59
SNAI3Q3KNW1 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.14□□□□□ -2.59
SNAI3Q3KNW1 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.14□□□□□ -2.59
SNAI3Q3KNW1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.14□□□□□ -2.59
SNAI3Q3KNW1 RNA5SP405-201ENST00000363059 114 ntBASIC-1.15□□□□□ -2.59
SNAI3Q3KNW1 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.15□□□□□ -2.59
SNAI3Q3KNW1 MIR548H4-201ENST00000408689 111 ntBASIC-1.15□□□□□ -2.59
SNAI3Q3KNW1 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.16□□□□□ -2.6
SNAI3Q3KNW1 MIR4317-201ENST00000637586 65 ntBASIC-1.16□□□□□ -2.6
SNAI3Q3KNW1 RNU6-930P-201ENST00000390938 100 ntBASIC-1.17□□□□□ -2.6
SNAI3Q3KNW1 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.18□□□□□ -2.6
SNAI3Q3KNW1 MIR1285-2-201ENST00000408311 88 ntBASIC-1.18□□□□□ -2.6
SNAI3Q3KNW1 SNORD113-3-201ENST00000364830 72 ntBASIC-1.19□□□□□ -2.6
SNAI3Q3KNW1 MIR548F3-201ENST00000408509 87 ntBASIC-1.19□□□□□ -2.6
SNAI3Q3KNW1 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.2□□□□□ -2.6
SNAI3Q3KNW1 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
SNAI3Q3KNW1 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.2□□□□□ -2.6
SNAI3Q3KNW1 MIR4748-201ENST00000578076 82 ntBASIC-1.2□□□□□ -2.6
SNAI3Q3KNW1 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.21□□□□□ -2.6
SNAI3Q3KNW1 RNU6-987P-201ENST00000384759 104 ntBASIC-1.21□□□□□ -2.6
SNAI3Q3KNW1 RNU4-37P-201ENST00000410214 84 ntBASIC-1.21□□□□□ -2.6
SNAI3Q3KNW1 AC097484.2-201ENST00000509147 251 ntBASIC-1.21□□□□□ -2.6
SNAI3Q3KNW1 RNU6-118P-201ENST00000516552 102 ntBASIC-1.21□□□□□ -2.6
SNAI3Q3KNW1 MIR3139-201ENST00000579145 76 ntBASIC-1.21□□□□□ -2.6
SNAI3Q3KNW1 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.22□□□□□ -2.6
SNAI3Q3KNW1 RNU6-912P-201ENST00000363800 104 ntBASIC-1.23□□□□□ -2.61
SNAI3Q3KNW1 RNU6-194P-201ENST00000363862 105 ntBASIC-1.23□□□□□ -2.61
SNAI3Q3KNW1 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.23□□□□□ -2.61
SNAI3Q3KNW1 RNU6-141P-201ENST00000410499 105 ntBASIC-1.23□□□□□ -2.61
SNAI3Q3KNW1 FTX_4.1-201ENST00000616291 147 ntBASIC-1.23□□□□□ -2.61
SNAI3Q3KNW1 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.24□□□□□ -2.61
SNAI3Q3KNW1 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.24□□□□□ -2.61
SNAI3Q3KNW1 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.24□□□□□ -2.61
SNAI3Q3KNW1 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.24□□□□□ -2.61
SNAI3Q3KNW1 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.24□□□□□ -2.61
SNAI3Q3KNW1 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.24□□□□□ -2.61
SNAI3Q3KNW1 MIR4441-201ENST00000582623 100 ntBASIC-1.25□□□□□ -2.61
SNAI3Q3KNW1 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.26□□□□□ -2.61
SNAI3Q3KNW1 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.26□□□□□ -2.61
SNAI3Q3KNW1 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.27□□□□□ -2.61
SNAI3Q3KNW1 RNU6-986P-201ENST00000363133 102 ntBASIC-1.28□□□□□ -2.61
SNAI3Q3KNW1 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.28□□□□□ -2.61
SNAI3Q3KNW1 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.28□□□□□ -2.61
SNAI3Q3KNW1 MT-TM-201ENST00000387377 68 ntBASIC-1.28□□□□□ -2.61
SNAI3Q3KNW1 MIR365A-201ENST00000362260 87 ntBASIC-1.29□□□□□ -2.62
SNAI3Q3KNW1 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.29□□□□□ -2.62
SNAI3Q3KNW1 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.29□□□□□ -2.62
SNAI3Q3KNW1 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.3□□□□□ -2.62
SNAI3Q3KNW1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.3□□□□□ -2.62
SNAI3Q3KNW1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms