Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.91□□□□□ -2.72
RAB40BQ12829 MIR3134-201ENST00000579433 74 ntBASIC-1.91□□□□□ -2.72
RAB40BQ12829 MIR1245B-201ENST00000636115 69 ntBASIC-1.91□□□□□ -2.72
RAB40BQ12829 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.92□□□□□ -2.72
RAB40BQ12829 RNU6-119P-201ENST00000364882 107 ntBASIC-1.92□□□□□ -2.72
RAB40BQ12829 RNU6-590P-201ENST00000365039 107 ntBASIC-1.92□□□□□ -2.72
RAB40BQ12829 AL451105.1-201ENST00000450005 189 ntBASIC-1.92□□□□□ -2.72
RAB40BQ12829 RNU7-171P-201ENST00000459581 62 ntBASIC-1.92□□□□□ -2.72
RAB40BQ12829 MIR4426-201ENST00000640330 63 ntBASIC-1.92□□□□□ -2.72
RAB40BQ12829 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.93□□□□□ -2.72
RAB40BQ12829 RNU6-122P-201ENST00000516818 107 ntBASIC-1.93□□□□□ -2.72
RAB40BQ12829 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.93□□□□□ -2.72
RAB40BQ12829 RNU6-176P-201ENST00000517196 105 ntBASIC-1.94□□□□□ -2.72
RAB40BQ12829 SNORD45.2-201ENST00000363552 72 ntBASIC-1.95□□□□□ -2.72
RAB40BQ12829 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.95□□□□□ -2.72
RAB40BQ12829 RNU6-49P-201ENST00000384256 107 ntBASIC-1.95□□□□□ -2.72
RAB40BQ12829 RNU6-300P-201ENST00000459080 104 ntBASIC-1.95□□□□□ -2.72
RAB40BQ12829 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.96□□□□□ -2.72
RAB40BQ12829 SNORA25.5-201ENST00000363782 126 ntBASIC-1.97□□□□□ -2.72
RAB40BQ12829 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.97□□□□□ -2.72
RAB40BQ12829 MIR1207-201ENST00000408249 87 ntBASIC-1.97□□□□□ -2.72
RAB40BQ12829 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.98□□□□□ -2.73
RAB40BQ12829 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.98□□□□□ -2.73
RAB40BQ12829 AL603908.1-201ENST00000406098 201 ntBASIC-1.98□□□□□ -2.73
RAB40BQ12829 RNU6-44P-201ENST00000384045 107 ntBASIC-1.99□□□□□ -2.73
RAB40BQ12829 SNORD54-201ENST00000459159 67 ntBASIC-1.99□□□□□ -2.73
RAB40BQ12829 RNU7-119P-201ENST00000459279 63 ntBASIC-1.99□□□□□ -2.73
RAB40BQ12829 Y_RNA.59-201ENST00000362828 102 ntBASIC-2□□□□□ -2.73
RAB40BQ12829 RNU6-742P-201ENST00000365289 107 ntBASIC-2□□□□□ -2.73
RAB40BQ12829 RNA5SP89-201ENST00000410300 108 ntBASIC-2□□□□□ -2.73
RAB40BQ12829 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2□□□□□ -2.73
RAB40BQ12829 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.01□□□□□ -2.73
RAB40BQ12829 RNU6-411P-201ENST00000384451 107 ntBASIC-2.01□□□□□ -2.73
RAB40BQ12829 MIR1254-1-201ENST00000408257 97 ntBASIC-2.01□□□□□ -2.73
RAB40BQ12829 RNU6-419P-201ENST00000517030 63 ntBASIC-2.01□□□□□ -2.73
RAB40BQ12829 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.02□□□□□ -2.73
RAB40BQ12829 RNU6-634P-201ENST00000459134 106 ntBASIC-2.02□□□□□ -2.73
RAB40BQ12829 RNU6-345P-201ENST00000517001 107 ntBASIC-2.02□□□□□ -2.73
RAB40BQ12829 MIR4666B-201ENST00000578142 81 ntBASIC-2.02□□□□□ -2.73
RAB40BQ12829 AL731768.1-201ENST00000603124 139 ntBASIC-2.02□□□□□ -2.73
RAB40BQ12829 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.04□□□□□ -2.74
RAB40BQ12829 RNU6-787P-201ENST00000384032 107 ntBASIC-2.04□□□□□ -2.74
RAB40BQ12829 RNU6-663P-201ENST00000391105 106 ntBASIC-2.04□□□□□ -2.74
RAB40BQ12829 SNORA25.4-201ENST00000363666 124 ntBASIC-2.05□□□□□ -2.74
RAB40BQ12829 RNY4P30-201ENST00000410216 95 ntBASIC-2.05□□□□□ -2.74
RAB40BQ12829 RNU6-242P-201ENST00000384359 107 ntBASIC-2.07□□□□□ -2.74
RAB40BQ12829 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.07□□□□□ -2.74
RAB40BQ12829 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.08□□□□□ -2.74
RAB40BQ12829 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.08□□□□□ -2.74
RAB40BQ12829 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.08□□□□□ -2.74
RAB40BQ12829 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.08□□□□□ -2.74
RAB40BQ12829 MIR3938-201ENST00000582157 103 ntBASIC-2.08□□□□□ -2.74
RAB40BQ12829 RNU6-230P-201ENST00000362457 104 ntBASIC-2.09□□□□□ -2.74
RAB40BQ12829 RNU6-940P-201ENST00000363433 104 ntBASIC-2.09□□□□□ -2.74
RAB40BQ12829 MIR4511-201ENST00000582784 87 ntBASIC-2.09□□□□□ -2.74
RAB40BQ12829 U7.4-201ENST00000614961 63 ntBASIC-2.09□□□□□ -2.74
RAB40BQ12829 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.1□□□□□ -2.75
RAB40BQ12829 MIR5693-201ENST00000577722 73 ntBASIC-2.1□□□□□ -2.75
RAB40BQ12829 MIR494-201ENST00000349529 81 ntBASIC-2.11□□□□□ -2.75
RAB40BQ12829 RNA5SP93-201ENST00000362525 114 ntBASIC-2.11□□□□□ -2.75
RAB40BQ12829 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.12□□□□□ -2.75
RAB40BQ12829 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.12□□□□□ -2.75
RAB40BQ12829 AC103706.3-201ENST00000636297 85 ntBASIC-2.12□□□□□ -2.75
RAB40BQ12829 RNY4P25-201ENST00000459254 96 ntBASIC-2.13□□□□□ -2.75
RAB40BQ12829 RNU6-406P-201ENST00000516470 107 ntBASIC-2.13□□□□□ -2.75
RAB40BQ12829 MIR450A2-201ENST00000385022 100 ntBASIC-2.15□□□□□ -2.75
RAB40BQ12829 MIR548X-201ENST00000580069 75 ntBASIC-2.15□□□□□ -2.75
RAB40BQ12829 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.16□□□□□ -2.76
RAB40BQ12829 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.16□□□□□ -2.76
RAB40BQ12829 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.16□□□□□ -2.76
RAB40BQ12829 RNU6-800P-201ENST00000384473 103 ntBASIC-2.16□□□□□ -2.76
RAB40BQ12829 SNORD30.1-201ENST00000391309 70 ntBASIC-2.16□□□□□ -2.76
RAB40BQ12829 U6.111-201ENST00000636093 83 ntBASIC-2.16□□□□□ -2.76
RAB40BQ12829 RNU6-822P-201ENST00000362707 106 ntBASIC-2.18□□□□□ -2.76
RAB40BQ12829 AL359920.1-201ENST00000618332 176 ntBASIC-2.18□□□□□ -2.76
RAB40BQ12829 RNU6-294P-201ENST00000364999 102 ntBASIC-2.19□□□□□ -2.76
RAB40BQ12829 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.19□□□□□ -2.76
RAB40BQ12829 AC062037.1-201ENST00000605302 128 ntBASIC-2.19□□□□□ -2.76
RAB40BQ12829 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.2□□□□□ -2.76
RAB40BQ12829 RNU6-153P-201ENST00000364422 104 ntBASIC-2.2□□□□□ -2.76
RAB40BQ12829 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.2□□□□□ -2.76
RAB40BQ12829 AC110620.1-201ENST00000416042 228 ntBASIC-2.2□□□□□ -2.76
RAB40BQ12829 AC139453.2-201ENST00000487255 133 ntBASIC-2.2□□□□□ -2.76
RAB40BQ12829 RNU6-539P-201ENST00000516665 103 ntBASIC-2.2□□□□□ -2.76
RAB40BQ12829 RNA5SP224-201ENST00000365069 126 ntBASIC-2.21□□□□□ -2.76
RAB40BQ12829 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.21□□□□□ -2.76
RAB40BQ12829 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.21□□□□□ -2.76
RAB40BQ12829 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.22□□□□□ -2.76
RAB40BQ12829 MIR656-201ENST00000385224 78 ntBASIC-2.22□□□□□ -2.76
RAB40BQ12829 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.22□□□□□ -2.76
RAB40BQ12829 RNU6-820P-201ENST00000384273 107 ntBASIC-2.23□□□□□ -2.77
RAB40BQ12829 MIR548H4-201ENST00000408689 111 ntBASIC-2.23□□□□□ -2.77
RAB40BQ12829 RNU6-871P-201ENST00000516122 100 ntBASIC-2.23□□□□□ -2.77
RAB40BQ12829 RNU6-854P-201ENST00000364036 107 ntBASIC-2.24□□□□□ -2.77
RAB40BQ12829 SNORD114-13-201ENST00000364377 74 ntBASIC-2.24□□□□□ -2.77
RAB40BQ12829 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.25□□□□□ -2.77
RAB40BQ12829 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.26□□□□□ -2.77
RAB40BQ12829 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.26□□□□□ -2.77
RAB40BQ12829 MIR4317-201ENST00000637586 65 ntBASIC-2.26□□□□□ -2.77
RAB40BQ12829 RNU6-446P-201ENST00000362827 106 ntBASIC-2.27□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms