Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-875P-201ENST00000516488 106 ntBASIC-1.6□□□□□ -2.67
HSPG2P98160 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.6□□□□□ -2.67
HSPG2P98160 RNU4-33P-201ENST00000364316 85 ntBASIC-1.61□□□□□ -2.67
HSPG2P98160 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.61□□□□□ -2.67
HSPG2P98160 RNU6-111P-201ENST00000517179 105 ntBASIC-1.61□□□□□ -2.67
HSPG2P98160 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.61□□□□□ -2.67
HSPG2P98160 MIR1245B-201ENST00000636115 69 ntBASIC-1.61□□□□□ -2.67
HSPG2P98160 MIR569-201ENST00000385228 96 ntBASIC-1.62□□□□□ -2.67
HSPG2P98160 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.62□□□□□ -2.67
HSPG2P98160 RNU4-85P-201ENST00000364675 123 ntBASIC-1.62□□□□□ -2.67
HSPG2P98160 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.63□□□□□ -2.67
HSPG2P98160 RNU6-959P-201ENST00000384671 107 ntBASIC-1.63□□□□□ -2.67
HSPG2P98160 AL589823.1-201ENST00000429577 183 ntBASIC-1.63□□□□□ -2.67
HSPG2P98160 MTND4P29-201ENST00000503122 1372 ntBASIC-1.63□□□□□ -2.67
HSPG2P98160 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.63□□□□□ -2.67
HSPG2P98160 RNA5SP449-201ENST00000516871 130 ntBASIC-1.63□□□□□ -2.67
HSPG2P98160 RNU6-844P-201ENST00000517175 102 ntBASIC-1.63□□□□□ -2.67
HSPG2P98160 RNU6-907P-201ENST00000390924 102 ntBASIC-1.63□□□□□ -2.67
HSPG2P98160 AC004792.1-201ENST00000614523 137 ntBASIC-1.63□□□□□ -2.67
HSPG2P98160 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.64□□□□□ -2.67
HSPG2P98160 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.64□□□□□ -2.67
HSPG2P98160 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.65□□□□□ -2.67
HSPG2P98160 RNU6-808P-201ENST00000391233 108 ntBASIC-1.65□□□□□ -2.67
HSPG2P98160 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.65□□□□□ -2.67
HSPG2P98160 U7.4-201ENST00000614961 63 ntBASIC-1.65□□□□□ -2.67
HSPG2P98160 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.65□□□□□ -2.67
HSPG2P98160 RNU7-171P-201ENST00000459581 62 ntBASIC-1.65□□□□□ -2.67
HSPG2P98160 AC103706.3-201ENST00000636297 85 ntBASIC-1.65□□□□□ -2.67
HSPG2P98160 MTATP8P1-201ENST00000467115 207 ntBASIC-1.66□□□□□ -2.67
HSPG2P98160 MIR3134-201ENST00000579433 74 ntBASIC-1.66□□□□□ -2.67
HSPG2P98160 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.66□□□□□ -2.67
HSPG2P98160 RNU6-257P-201ENST00000410238 98 ntBASIC-1.66□□□□□ -2.67
HSPG2P98160 Y_RNA.15-201ENST00000362420 102 ntBASIC-1.66□□□□□ -2.68
HSPG2P98160 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.66□□□□□ -2.68
HSPG2P98160 MALAT1.1-201ENST00000618249 95 ntBASIC-1.66□□□□□ -2.68
HSPG2P98160 MIR4679-1-201ENST00000637619 75 ntBASIC-1.66□□□□□ -2.68
HSPG2P98160 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.67□□□□□ -2.68
HSPG2P98160 AC062037.2-201ENST00000610137 73 ntBASIC-1.67□□□□□ -2.68
HSPG2P98160 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.67□□□□□ -2.68
HSPG2P98160 U6atac.1-201ENST00000616025 117 ntBASIC-1.67□□□□□ -2.68
HSPG2P98160 AC044792.1-201ENST00000593294 196 ntBASIC-1.67□□□□□ -2.68
HSPG2P98160 SNORA25.4-201ENST00000363666 124 ntBASIC-1.68□□□□□ -2.68
HSPG2P98160 SNORD30.1-201ENST00000391309 70 ntBASIC-1.68□□□□□ -2.68
HSPG2P98160 AL117351.2-201ENST00000513571 157 ntBASIC-1.68□□□□□ -2.68
HSPG2P98160 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.68□□□□□ -2.68
HSPG2P98160 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.68□□□□□ -2.68
HSPG2P98160 RNU6-379P-201ENST00000363813 104 ntBASIC-1.68□□□□□ -2.68
HSPG2P98160 RNU6-200P-201ENST00000364743 107 ntBASIC-1.68□□□□□ -2.68
HSPG2P98160 MIR548F4-201ENST00000408515 105 ntBASIC-1.68□□□□□ -2.68
HSPG2P98160 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.68□□□□□ -2.68
HSPG2P98160 RNU6-589P-201ENST00000516485 107 ntBASIC-1.68□□□□□ -2.68
HSPG2P98160 MTND5P20-201ENST00000448677 143 ntBASIC-1.69□□□□□ -2.68
HSPG2P98160 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.69□□□□□ -2.68
HSPG2P98160 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.7□□□□□ -2.68
HSPG2P98160 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.7□□□□□ -2.68
HSPG2P98160 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.7□□□□□ -2.68
HSPG2P98160 MIR1302-3-201ENST00000408128 138 ntBASIC-1.7□□□□□ -2.68
HSPG2P98160 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.7□□□□□ -2.68
HSPG2P98160 MIR4760-201ENST00000585040 80 ntBASIC-1.7□□□□□ -2.68
HSPG2P98160 RNU6-838P-201ENST00000363399 108 ntBASIC-1.71□□□□□ -2.68
HSPG2P98160 MTCYBP9-201ENST00000431021 303 ntBASIC-1.71□□□□□ -2.68
HSPG2P98160 MTND5P41-201ENST00000517498 206 ntBASIC-1.71□□□□□ -2.68
HSPG2P98160 RNU6-871P-201ENST00000516122 100 ntBASIC-1.71□□□□□ -2.68
HSPG2P98160 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.72□□□□□ -2.68
HSPG2P98160 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.72□□□□□ -2.69
HSPG2P98160 RNU7-200P-201ENST00000516105 62 ntBASIC-1.72□□□□□ -2.69
HSPG2P98160 AC110620.1-201ENST00000416042 228 ntBASIC-1.73□□□□□ -2.69
HSPG2P98160 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.73□□□□□ -2.69
HSPG2P98160 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.73□□□□□ -2.69
HSPG2P98160 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.73□□□□□ -2.69
HSPG2P98160 AL117187.1-201ENST00000555482 181 ntBASIC-1.73□□□□□ -2.69
HSPG2P98160 MIR4666B-201ENST00000578142 81 ntBASIC-1.73□□□□□ -2.69
HSPG2P98160 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.73□□□□□ -2.69
HSPG2P98160 RNU6-627P-201ENST00000364032 102 ntBASIC-1.74□□□□□ -2.69
HSPG2P98160 MIR4712-201ENST00000583750 82 ntBASIC-1.74□□□□□ -2.69
HSPG2P98160 MIR4511-201ENST00000582784 87 ntBASIC-1.74□□□□□ -2.69
HSPG2P98160 MIR4795-201ENST00000584182 89 ntBASIC-1.74□□□□□ -2.69
HSPG2P98160 IGLL4P-201ENST00000614590 133 ntBASIC-1.74□□□□□ -2.69
HSPG2P98160 MIR5588-201ENST00000581890 63 ntBASIC-1.75□□□□□ -2.69
HSPG2P98160 AC008737.2-201ENST00000599446 118 ntBASIC-1.75□□□□□ -2.69
HSPG2P98160 RNU6-209P-201ENST00000384118 107 ntBASIC-1.76□□□□□ -2.69
HSPG2P98160 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.76□□□□□ -2.69
HSPG2P98160 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.76□□□□□ -2.69
HSPG2P98160 AC008267.6-201ENST00000441664 139 ntBASIC-1.76□□□□□ -2.69
HSPG2P98160 SNORD113-1-201ENST00000365321 69 ntBASIC-1.76□□□□□ -2.69
HSPG2P98160 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.77□□□□□ -2.69
HSPG2P98160 RNU6-539P-201ENST00000516665 103 ntBASIC-1.77□□□□□ -2.69
HSPG2P98160 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.77□□□□□ -2.69
HSPG2P98160 RNY1P5-201ENST00000383890 115 ntBASIC-1.77□□□□□ -2.69
HSPG2P98160 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.77□□□□□ -2.69
HSPG2P98160 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.77□□□□□ -2.69
HSPG2P98160 RNU6-32P-201ENST00000383948 107 ntBASIC-1.77□□□□□ -2.69
HSPG2P98160 RNU6-13P-201ENST00000384248 107 ntBASIC-1.77□□□□□ -2.69
HSPG2P98160 RNU6-12P-201ENST00000384604 107 ntBASIC-1.77□□□□□ -2.69
HSPG2P98160 RNU6-41P-201ENST00000384741 107 ntBASIC-1.77□□□□□ -2.69
HSPG2P98160 MIR568-201ENST00000385036 95 ntBASIC-1.77□□□□□ -2.69
HSPG2P98160 RNU6-346P-201ENST00000516288 111 ntBASIC-1.77□□□□□ -2.69
HSPG2P98160 SNORD116-14-201ENST00000383894 92 ntBASIC-1.78□□□□□ -2.69
HSPG2P98160 SNORD116-17-201ENST00000383929 92 ntBASIC-1.78□□□□□ -2.69
HSPG2P98160 SNORD116-15-201ENST00000384445 92 ntBASIC-1.78□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms