Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNU6-542P-201ENST00000516405 103 ntBASIC-2.34□□□□□ -2.78
VSX2P58304 RNU6-68P-201ENST00000516576 104 ntBASIC-2.34□□□□□ -2.78
VSX2P58304 RNU6-92P-201ENST00000605893 104 ntBASIC-2.34□□□□□ -2.78
VSX2P58304 MIR202-201ENST00000362219 110 ntBASIC-2.36□□□□□ -2.79
VSX2P58304 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.36□□□□□ -2.79
VSX2P58304 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.36□□□□□ -2.79
VSX2P58304 RNY4P30-201ENST00000410216 95 ntBASIC-2.36□□□□□ -2.79
VSX2P58304 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.36□□□□□ -2.79
VSX2P58304 MIR494-201ENST00000349529 81 ntBASIC-2.37□□□□□ -2.79
VSX2P58304 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.37□□□□□ -2.79
VSX2P58304 SNORA17.4-201ENST00000391287 132 ntBASIC-2.37□□□□□ -2.79
VSX2P58304 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.37□□□□□ -2.79
VSX2P58304 RNU6-649P-201ENST00000384463 107 ntBASIC-2.38□□□□□ -2.79
VSX2P58304 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.38□□□□□ -2.79
VSX2P58304 SNORD60.1-201ENST00000362451 73 ntBASIC-2.39□□□□□ -2.79
VSX2P58304 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.4□□□□□ -2.79
VSX2P58304 MIR379-201ENST00000362218 67 ntBASIC-2.41□□□□□ -2.8
VSX2P58304 RNU6-828P-201ENST00000364876 107 ntBASIC-2.41□□□□□ -2.8
VSX2P58304 RNU6-787P-201ENST00000384032 107 ntBASIC-2.41□□□□□ -2.8
VSX2P58304 MIR4666B-201ENST00000578142 81 ntBASIC-2.41□□□□□ -2.8
VSX2P58304 RNU6-912P-201ENST00000363800 104 ntBASIC-2.43□□□□□ -2.8
VSX2P58304 RNU6-810P-201ENST00000364001 107 ntBASIC-2.43□□□□□ -2.8
VSX2P58304 RNU6-803P-201ENST00000516034 102 ntBASIC-2.43□□□□□ -2.8
VSX2P58304 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.43□□□□□ -2.8
VSX2P58304 MIR5693-201ENST00000577722 73 ntBASIC-2.43□□□□□ -2.8
VSX2P58304 MIR7110-201ENST00000612638 86 ntBASIC-2.43□□□□□ -2.8
VSX2P58304 RNU6-242P-201ENST00000384359 107 ntBASIC-2.44□□□□□ -2.8
VSX2P58304 RNU6-530P-201ENST00000391180 107 ntBASIC-2.44□□□□□ -2.8
VSX2P58304 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.44□□□□□ -2.8
VSX2P58304 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.45□□□□□ -2.8
VSX2P58304 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.46□□□□□ -2.8
VSX2P58304 RNU6-231P-201ENST00000517122 103 ntBASIC-2.46□□□□□ -2.8
VSX2P58304 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.46□□□□□ -2.8
VSX2P58304 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.46□□□□□ -2.8
VSX2P58304 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.47□□□□□ -2.8
VSX2P58304 MIR450A2-201ENST00000385022 100 ntBASIC-2.47□□□□□ -2.8
VSX2P58304 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.47□□□□□ -2.8
VSX2P58304 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.48□□□□□ -2.81
VSX2P58304 RNU6-411P-201ENST00000384451 107 ntBASIC-2.48□□□□□ -2.81
VSX2P58304 SNORD116.2-201ENST00000391251 93 ntBASIC-2.48□□□□□ -2.81
VSX2P58304 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.49□□□□□ -2.81
VSX2P58304 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.5□□□□□ -2.81
VSX2P58304 RNU6-294P-201ENST00000364999 102 ntBASIC-2.52□□□□□ -2.81
VSX2P58304 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.52□□□□□ -2.81
VSX2P58304 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.52□□□□□ -2.81
VSX2P58304 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.52□□□□□ -2.81
VSX2P58304 RNU6-153P-201ENST00000364422 104 ntBASIC-2.53□□□□□ -2.81
VSX2P58304 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.53□□□□□ -2.81
VSX2P58304 AL731768.1-201ENST00000603124 139 ntBASIC-2.53□□□□□ -2.81
VSX2P58304 U7.4-201ENST00000614961 63 ntBASIC-2.53□□□□□ -2.81
VSX2P58304 RNU6-590P-201ENST00000365039 107 ntBASIC-2.54□□□□□ -2.82
VSX2P58304 MIR4426-201ENST00000640330 63 ntBASIC-2.54□□□□□ -2.82
VSX2P58304 RNU6-663P-201ENST00000391105 106 ntBASIC-2.55□□□□□ -2.82
VSX2P58304 RNU6-634P-201ENST00000459134 106 ntBASIC-2.55□□□□□ -2.82
VSX2P58304 RNU6-176P-201ENST00000517196 105 ntBASIC-2.55□□□□□ -2.82
VSX2P58304 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.56□□□□□ -2.82
VSX2P58304 SNORA40B-201ENST00000385573 128 ntBASIC-2.56□□□□□ -2.82
VSX2P58304 SNORA25.5-201ENST00000363782 126 ntBASIC-2.57□□□□□ -2.82
VSX2P58304 AL451105.1-201ENST00000450005 189 ntBASIC-2.58□□□□□ -2.82
VSX2P58304 RNU6-300P-201ENST00000459080 104 ntBASIC-2.58□□□□□ -2.82
VSX2P58304 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.59□□□□□ -2.82
VSX2P58304 MIR1254-1-201ENST00000408257 97 ntBASIC-2.59□□□□□ -2.82
VSX2P58304 RNY4P25-201ENST00000459254 96 ntBASIC-2.59□□□□□ -2.82
VSX2P58304 RNU6-122P-201ENST00000516818 107 ntBASIC-2.59□□□□□ -2.82
VSX2P58304 RNU6-345P-201ENST00000517001 107 ntBASIC-2.59□□□□□ -2.82
VSX2P58304 SNORA40.16-201ENST00000517238 121 ntBASIC-2.59□□□□□ -2.82
VSX2P58304 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.59□□□□□ -2.82
VSX2P58304 SNORD45.2-201ENST00000363552 72 ntBASIC-2.6□□□□□ -2.83
VSX2P58304 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.6□□□□□ -2.83
VSX2P58304 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.6□□□□□ -2.83
VSX2P58304 AL603908.1-201ENST00000406098 201 ntBASIC-2.6□□□□□ -2.83
VSX2P58304 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.6□□□□□ -2.83
VSX2P58304 AC062037.1-201ENST00000605302 128 ntBASIC-2.6□□□□□ -2.83
VSX2P58304 RNU6-820P-201ENST00000384273 107 ntBASIC-2.61□□□□□ -2.83
VSX2P58304 MIR5582-201ENST00000579697 68 ntBASIC-2.61□□□□□ -2.83
VSX2P58304 RNU6-406P-201ENST00000516470 107 ntBASIC-2.63□□□□□ -2.83
VSX2P58304 SNORA25.4-201ENST00000363666 124 ntBASIC-2.65□□□□□ -2.83
VSX2P58304 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.65□□□□□ -2.83
VSX2P58304 SNORD30.1-201ENST00000391309 70 ntBASIC-2.65□□□□□ -2.83
VSX2P58304 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.66□□□□□ -2.84
VSX2P58304 MIR509-1-201ENST00000385265 94 ntBASIC-2.66□□□□□ -2.84
VSX2P58304 MIR509-2-201ENST00000390724 91 ntBASIC-2.66□□□□□ -2.84
VSX2P58304 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.67□□□□□ -2.84
VSX2P58304 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.67□□□□□ -2.84
VSX2P58304 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.67□□□□□ -2.84
VSX2P58304 RNU6-742P-201ENST00000365289 107 ntBASIC-2.69□□□□□ -2.84
VSX2P58304 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.69□□□□□ -2.84
VSX2P58304 RNA5SP106-201ENST00000517274 100 ntBASIC-2.69□□□□□ -2.84
VSX2P58304 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.7□□□□□ -2.84
VSX2P58304 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.7□□□□□ -2.84
VSX2P58304 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.71□□□□□ -2.84
VSX2P58304 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.71□□□□□ -2.84
VSX2P58304 RNU7-119P-201ENST00000459279 63 ntBASIC-2.71□□□□□ -2.84
VSX2P58304 AL359920.1-201ENST00000618332 176 ntBASIC-2.71□□□□□ -2.84
VSX2P58304 RNU6-800P-201ENST00000384473 103 ntBASIC-2.72□□□□□ -2.84
VSX2P58304 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.72□□□□□ -2.84
VSX2P58304 RNU6-419P-201ENST00000517030 63 ntBASIC-2.73□□□□□ -2.85
VSX2P58304 MIR4511-201ENST00000582784 87 ntBASIC-2.73□□□□□ -2.85
VSX2P58304 RNY4P10-201ENST00000365571 96 ntBASIC-2.74□□□□□ -2.85
VSX2P58304 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.76□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms