Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.53□□□□□ -2.65
VCPP55072 RNU6-573P-201ENST00000383938 106 ntBASIC-1.54□□□□□ -2.66
VCPP55072 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.54□□□□□ -2.66
VCPP55072 U7.4-201ENST00000614961 63 ntBASIC-1.54□□□□□ -2.66
VCPP55072 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.55□□□□□ -2.66
VCPP55072 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.55□□□□□ -2.66
VCPP55072 RNU6-361P-201ENST00000364454 107 ntBASIC-1.55□□□□□ -2.66
VCPP55072 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.55□□□□□ -2.66
VCPP55072 SNORD18C-201ENST00000362704 69 ntBASIC-1.56□□□□□ -2.66
VCPP55072 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.56□□□□□ -2.66
VCPP55072 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.56□□□□□ -2.66
VCPP55072 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.56□□□□□ -2.66
VCPP55072 RNU6-530P-201ENST00000391180 107 ntBASIC-1.56□□□□□ -2.66
VCPP55072 SNORA17.4-201ENST00000391287 132 ntBASIC-1.57□□□□□ -2.66
VCPP55072 SNORA25.4-201ENST00000363666 124 ntBASIC-1.58□□□□□ -2.66
VCPP55072 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.58□□□□□ -2.66
VCPP55072 RNU6-742P-201ENST00000365289 107 ntBASIC-1.58□□□□□ -2.66
VCPP55072 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.58□□□□□ -2.66
VCPP55072 RNU6-820P-201ENST00000384273 107 ntBASIC-1.58□□□□□ -2.66
VCPP55072 RNU6-118P-201ENST00000516552 102 ntBASIC-1.58□□□□□ -2.66
VCPP55072 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.59□□□□□ -2.66
VCPP55072 MIR1255A-201ENST00000408338 113 ntBASIC-1.59□□□□□ -2.66
VCPP55072 RNA5SP405-201ENST00000363059 114 ntBASIC-1.6□□□□□ -2.67
VCPP55072 SNORD73B-201ENST00000364394 72 ntBASIC-1.6□□□□□ -2.67
VCPP55072 SNORD113-3-201ENST00000364830 72 ntBASIC-1.6□□□□□ -2.67
VCPP55072 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.6□□□□□ -2.67
VCPP55072 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.6□□□□□ -2.67
VCPP55072 MIR4511-201ENST00000582784 87 ntBASIC-1.6□□□□□ -2.67
VCPP55072 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
VCPP55072 RNU6-912P-201ENST00000363800 104 ntBASIC-1.61□□□□□ -2.67
VCPP55072 SNORD60-201ENST00000383903 83 ntBASIC-1.61□□□□□ -2.67
VCPP55072 SNORD30.1-201ENST00000391309 70 ntBASIC-1.61□□□□□ -2.67
VCPP55072 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.61□□□□□ -2.67
VCPP55072 AL451105.1-201ENST00000450005 189 ntBASIC-1.61□□□□□ -2.67
VCPP55072 RNU6-857P-201ENST00000515893 110 ntBASIC-1.61□□□□□ -2.67
VCPP55072 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.61□□□□□ -2.67
VCPP55072 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.61□□□□□ -2.67
VCPP55072 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.62□□□□□ -2.67
VCPP55072 U6.111-201ENST00000636093 83 ntBASIC-1.62□□□□□ -2.67
VCPP55072 MIR4426-201ENST00000640330 63 ntBASIC-1.62□□□□□ -2.67
VCPP55072 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.63□□□□□ -2.67
VCPP55072 AC097484.2-201ENST00000509147 251 ntBASIC-1.63□□□□□ -2.67
VCPP55072 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.64□□□□□ -2.67
VCPP55072 RNA5SP225-201ENST00000410874 135 ntBASIC-1.64□□□□□ -2.67
VCPP55072 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.65□□□□□ -2.67
VCPP55072 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.65□□□□□ -2.67
VCPP55072 RNU6-279P-201ENST00000391297 101 ntBASIC-1.65□□□□□ -2.67
VCPP55072 RNU6-419P-201ENST00000517030 63 ntBASIC-1.65□□□□□ -2.67
VCPP55072 MIR4748-201ENST00000578076 82 ntBASIC-1.65□□□□□ -2.67
VCPP55072 MIR466-201ENST00000580653 84 ntBASIC-1.65□□□□□ -2.67
VCPP55072 RNY4P29-201ENST00000410801 97 ntBASIC-1.66□□□□□ -2.68
VCPP55072 MIR3938-201ENST00000582157 103 ntBASIC-1.66□□□□□ -2.68
VCPP55072 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.66□□□□□ -2.68
VCPP55072 RNU6-446P-201ENST00000362827 106 ntBASIC-1.67□□□□□ -2.68
VCPP55072 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.67□□□□□ -2.68
VCPP55072 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.67□□□□□ -2.68
VCPP55072 MIR3139-201ENST00000579145 76 ntBASIC-1.67□□□□□ -2.68
VCPP55072 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.67□□□□□ -2.68
VCPP55072 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.67□□□□□ -2.68
VCPP55072 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.67□□□□□ -2.68
VCPP55072 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.67□□□□□ -2.68
VCPP55072 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.67□□□□□ -2.68
VCPP55072 RNU6-194P-201ENST00000363862 105 ntBASIC-1.68□□□□□ -2.68
VCPP55072 RNU6-590P-201ENST00000365039 107 ntBASIC-1.68□□□□□ -2.68
VCPP55072 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.68□□□□□ -2.68
VCPP55072 AC110620.1-201ENST00000416042 228 ntBASIC-1.68□□□□□ -2.68
VCPP55072 RNU6-141P-201ENST00000410499 105 ntBASIC-1.69□□□□□ -2.68
VCPP55072 FTX_4.1-201ENST00000616291 147 ntBASIC-1.69□□□□□ -2.68
VCPP55072 RNU6-800P-201ENST00000384473 103 ntBASIC-1.7□□□□□ -2.68
VCPP55072 RNU7-119P-201ENST00000459279 63 ntBASIC-1.7□□□□□ -2.68
VCPP55072 RNU6-539P-201ENST00000516665 103 ntBASIC-1.7□□□□□ -2.68
VCPP55072 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.7□□□□□ -2.68
VCPP55072 MIR3202-2-201ENST00000635980 79 ntBASIC-1.7□□□□□ -2.68
VCPP55072 AC103706.3-201ENST00000636297 85 ntBASIC-1.7□□□□□ -2.68
VCPP55072 RNU6-940P-201ENST00000363433 104 ntBASIC-1.71□□□□□ -2.68
VCPP55072 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.71□□□□□ -2.68
VCPP55072 RNU6-300P-201ENST00000459080 104 ntBASIC-1.71□□□□□ -2.68
VCPP55072 RNA5SP170-201ENST00000517150 101 ntBASIC-1.72□□□□□ -2.68
VCPP55072 MIR1254-1-201ENST00000408257 97 ntBASIC-1.73□□□□□ -2.69
VCPP55072 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.74□□□□□ -2.69
VCPP55072 SNORD113-4-201ENST00000364802 75 ntBASIC-1.74□□□□□ -2.69
VCPP55072 SNORD78.1-201ENST00000390866 65 ntBASIC-1.74□□□□□ -2.69
VCPP55072 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.74□□□□□ -2.69
VCPP55072 SNORA26.2-201ENST00000390922 122 ntBASIC-1.75□□□□□ -2.69
VCPP55072 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.76□□□□□ -2.69
VCPP55072 MIR379-201ENST00000362218 67 ntBASIC-1.77□□□□□ -2.69
VCPP55072 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.77□□□□□ -2.69
VCPP55072 RNU6-871P-201ENST00000516122 100 ntBASIC-1.77□□□□□ -2.69
VCPP55072 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.78□□□□□ -2.69
VCPP55072 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.78□□□□□ -2.69
VCPP55072 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.78□□□□□ -2.69
VCPP55072 MT-TM-201ENST00000387377 68 ntBASIC-1.78□□□□□ -2.69
VCPP55072 MIR548X-201ENST00000580069 75 ntBASIC-1.78□□□□□ -2.69
VCPP55072 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.79□□□□□ -2.7
VCPP55072 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.79□□□□□ -2.7
VCPP55072 SNORD45.2-201ENST00000363552 72 ntBASIC-1.8□□□□□ -2.7
VCPP55072 RNU6-776P-201ENST00000364403 104 ntBASIC-1.81□□□□□ -2.7
VCPP55072 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.81□□□□□ -2.7
VCPP55072 MIR548H4-201ENST00000408689 111 ntBASIC-1.81□□□□□ -2.7
VCPP55072 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 261.5 ms