Protein–RNA interactions for Protein: P50479

PDLIM4, PDZ and LIM domain protein 4, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4P50479 RNU6-226P-201ENST00000363778 107 ntBASIC-0.81□□□□□ -2.54
PDLIM4P50479 RNU4-33P-201ENST00000364316 85 ntBASIC-0.81□□□□□ -2.54
PDLIM4P50479 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.81□□□□□ -2.54
PDLIM4P50479 RNU6-706P-201ENST00000517229 104 ntBASIC-0.81□□□□□ -2.54
PDLIM4P50479 RNU6-361P-201ENST00000364454 107 ntBASIC-0.83□□□□□ -2.54
PDLIM4P50479 RNU6-576P-201ENST00000390854 102 ntBASIC-0.84□□□□□ -2.54
PDLIM4P50479 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.84□□□□□ -2.54
PDLIM4P50479 RNU6-79P-201ENST00000362511 107 ntBASIC-0.85□□□□□ -2.55
PDLIM4P50479 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.85□□□□□ -2.55
PDLIM4P50479 MIR496-201ENST00000385226 102 ntBASIC-0.85□□□□□ -2.55
PDLIM4P50479 AC018880.2-201ENST00000414265 201 ntBASIC-0.85□□□□□ -2.55
PDLIM4P50479 MTND4LP19-201ENST00000403051 166 ntBASIC-0.86□□□□□ -2.55
PDLIM4P50479 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.87□□□□□ -2.55
PDLIM4P50479 RNU6-530P-201ENST00000391180 107 ntBASIC-0.87□□□□□ -2.55
PDLIM4P50479 RNU6-808P-201ENST00000391233 108 ntBASIC-0.87□□□□□ -2.55
PDLIM4P50479 HLA-S-202ENST00000425174 53 ntBASIC-0.87□□□□□ -2.55
PDLIM4P50479 RNY4P7-201ENST00000364600 96 ntBASIC-0.88□□□□□ -2.55
PDLIM4P50479 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.88□□□□□ -2.55
PDLIM4P50479 RNY3P8-201ENST00000411366 126 ntBASIC-0.89□□□□□ -2.55
PDLIM4P50479 AC120024.2-201ENST00000576526 175 ntBASIC-0.89□□□□□ -2.55
PDLIM4P50479 AC138207.3-201ENST00000585289 166 ntBASIC-0.89□□□□□ -2.55
PDLIM4P50479 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.9□□□□□ -2.55
PDLIM4P50479 RNU7-134P-201ENST00000458997 64 ntBASIC-0.9□□□□□ -2.55
PDLIM4P50479 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.9□□□□□ -2.55
PDLIM4P50479 RNU6-119P-201ENST00000364882 107 ntBASIC-0.91□□□□□ -2.56
PDLIM4P50479 SNORD60-201ENST00000383903 83 ntBASIC-0.91□□□□□ -2.56
PDLIM4P50479 SNORA17.4-201ENST00000391287 132 ntBASIC-0.91□□□□□ -2.56
PDLIM4P50479 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.92□□□□□ -2.56
PDLIM4P50479 RNU6-936P-201ENST00000384005 107 ntBASIC-0.92□□□□□ -2.56
PDLIM4P50479 MIR548N-201ENST00000408742 75 ntBASIC-0.92□□□□□ -2.56
PDLIM4P50479 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.93□□□□□ -2.56
PDLIM4P50479 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.93□□□□□ -2.56
PDLIM4P50479 RNU6-400P-201ENST00000391173 106 ntBASIC-0.94□□□□□ -2.56
PDLIM4P50479 RNU6-983P-201ENST00000516004 103 ntBASIC-0.94□□□□□ -2.56
PDLIM4P50479 RNU6-176P-201ENST00000517196 105 ntBASIC-0.94□□□□□ -2.56
PDLIM4P50479 MIR5591-201ENST00000578248 65 ntBASIC-0.94□□□□□ -2.56
PDLIM4P50479 AC091912.2-201ENST00000624798 167 ntBASIC-0.94□□□□□ -2.56
PDLIM4P50479 MIR202-201ENST00000362219 110 ntBASIC-0.95□□□□□ -2.56
PDLIM4P50479 AC013734.1-201ENST00000619329 111 ntBASIC-0.95□□□□□ -2.56
PDLIM4P50479 RNU6-838P-201ENST00000363399 108 ntBASIC-0.96□□□□□ -2.56
PDLIM4P50479 RNU6-563P-201ENST00000364872 108 ntBASIC-0.96□□□□□ -2.56
PDLIM4P50479 MIR548AL-201ENST00000578416 97 ntBASIC-0.96□□□□□ -2.56
PDLIM4P50479 MIR4426-201ENST00000640330 63 ntBASIC-0.96□□□□□ -2.56
PDLIM4P50479 RNU6-742P-201ENST00000365289 107 ntBASIC-0.97□□□□□ -2.56
PDLIM4P50479 RNU6-753P-201ENST00000363926 107 ntBASIC-0.98□□□□□ -2.57
PDLIM4P50479 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.98□□□□□ -2.57
PDLIM4P50479 MIR8485-201ENST00000401372 91 ntBASIC-0.98□□□□□ -2.57
PDLIM4P50479 RNA5SP93-201ENST00000362525 114 ntBASIC-0.99□□□□□ -2.57
PDLIM4P50479 RNU6-987P-201ENST00000384759 104 ntBASIC-0.99□□□□□ -2.57
PDLIM4P50479 MIR4770-201ENST00000579149 58 ntBASIC-0.99□□□□□ -2.57
PDLIM4P50479 SNORD18C-201ENST00000362704 69 ntBASIC-1□□□□□ -2.57
PDLIM4P50479 RNU4-37P-201ENST00000410214 84 ntBASIC-1□□□□□ -2.57
PDLIM4P50479 MIR6874-201ENST00000635894 71 ntBASIC-1□□□□□ -2.57
PDLIM4P50479 RNU6-300P-201ENST00000459080 104 ntBASIC-1.01□□□□□ -2.57
PDLIM4P50479 RNU6-141P-201ENST00000410499 105 ntBASIC-1.02□□□□□ -2.57
PDLIM4P50479 RNY4-201ENST00000516507 96 ntBASIC-1.02□□□□□ -2.57
PDLIM4P50479 MIR6502-201ENST00000617296 76 ntBASIC-1.02□□□□□ -2.57
PDLIM4P50479 MIR581-201ENST00000384895 96 ntBASIC-1.03□□□□□ -2.57
PDLIM4P50479 SNORD54-201ENST00000459159 67 ntBASIC-1.03□□□□□ -2.57
PDLIM4P50479 RNU6-118P-201ENST00000516552 102 ntBASIC-1.04□□□□□ -2.58
PDLIM4P50479 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.06□□□□□ -2.58
PDLIM4P50479 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.06□□□□□ -2.58
PDLIM4P50479 MIR548F3-201ENST00000408509 87 ntBASIC-1.06□□□□□ -2.58
PDLIM4P50479 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.07□□□□□ -2.58
PDLIM4P50479 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.07□□□□□ -2.58
PDLIM4P50479 RNU6-930P-201ENST00000390938 100 ntBASIC-1.07□□□□□ -2.58
PDLIM4P50479 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.08□□□□□ -2.58
PDLIM4P50479 RNU6-695P-201ENST00000391157 104 ntBASIC-1.08□□□□□ -2.58
PDLIM4P50479 U6.97-201ENST00000636904 101 ntBASIC-1.08□□□□□ -2.58
PDLIM4P50479 MIR379-201ENST00000362218 67 ntBASIC-1.09□□□□□ -2.58
PDLIM4P50479 SNORD18.1-201ENST00000363807 70 ntBASIC-1.09□□□□□ -2.58
PDLIM4P50479 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.09□□□□□ -2.58
PDLIM4P50479 MIR548H4-201ENST00000408689 111 ntBASIC-1.09□□□□□ -2.58
PDLIM4P50479 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.09□□□□□ -2.58
PDLIM4P50479 RNU4-88P-201ENST00000411220 86 ntBASIC-1.11□□□□□ -2.59
PDLIM4P50479 RNU6-68P-201ENST00000516576 104 ntBASIC-1.11□□□□□ -2.59
PDLIM4P50479 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.11□□□□□ -2.59
PDLIM4P50479 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.12□□□□□ -2.59
PDLIM4P50479 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.12□□□□□ -2.59
PDLIM4P50479 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.12□□□□□ -2.59
PDLIM4P50479 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.13□□□□□ -2.59
PDLIM4P50479 MIR4317-201ENST00000637586 65 ntBASIC-1.13□□□□□ -2.59
PDLIM4P50479 MIR4520-1-201ENST00000582609 70 ntBASIC-1.14□□□□□ -2.59
PDLIM4P50479 RNA5SP86-201ENST00000390869 98 ntBASIC-1.15□□□□□ -2.59
PDLIM4P50479 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.16□□□□□ -2.6
PDLIM4P50479 MIR3123-201ENST00000583417 75 ntBASIC-1.17□□□□□ -2.6
PDLIM4P50479 RNU6-841P-201ENST00000383872 107 ntBASIC-1.19□□□□□ -2.6
PDLIM4P50479 MIR3139-201ENST00000579145 76 ntBASIC-1.2□□□□□ -2.6
PDLIM4P50479 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.22□□□□□ -2.6
PDLIM4P50479 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.23□□□□□ -2.61
PDLIM4P50479 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.24□□□□□ -2.61
PDLIM4P50479 MT-TM-201ENST00000387377 68 ntBASIC-1.25□□□□□ -2.61
PDLIM4P50479 MIR548H1-201ENST00000408610 102 ntBASIC-1.25□□□□□ -2.61
PDLIM4P50479 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.25□□□□□ -2.61
PDLIM4P50479 MIR664B-201ENST00000626756 61 ntBASIC-1.26□□□□□ -2.61
PDLIM4P50479 RNU6-986P-201ENST00000363133 102 ntBASIC-1.27□□□□□ -2.61
PDLIM4P50479 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.27□□□□□ -2.61
PDLIM4P50479 RNU6-59P-201ENST00000384787 107 ntBASIC-1.27□□□□□ -2.61
PDLIM4P50479 MIR545-201ENST00000385085 106 ntBASIC-1.27□□□□□ -2.61
PDLIM4P50479 AC108019.1-201ENST00000512540 175 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 245.6 ms