Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.42□□□□□ -2.64
COL1A1P02452 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.42□□□□□ -2.64
COL1A1P02452 RNU6-209P-201ENST00000384118 107 ntBASIC-1.42□□□□□ -2.64
COL1A1P02452 RNU6-675P-201ENST00000384236 104 ntBASIC-1.42□□□□□ -2.64
COL1A1P02452 RNU7-200P-201ENST00000516105 62 ntBASIC-1.42□□□□□ -2.64
COL1A1P02452 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 MIR606-201ENST00000384851 96 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 MTCYBP9-201ENST00000431021 303 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 MIR4712-201ENST00000583750 82 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 RNU6-315P-201ENST00000362666 107 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 RNU6-836P-201ENST00000362920 107 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 RNU6-200P-201ENST00000364743 107 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 RNU6-663P-201ENST00000391105 106 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 RNU6-380P-201ENST00000410207 107 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 RNU7-119P-201ENST00000459279 63 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 RNU6-388P-201ENST00000517012 105 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 RNU6-389P-201ENST00000517048 105 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 MIR548S-201ENST00000581352 82 ntBASIC-1.43□□□□□ -2.64
COL1A1P02452 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.44□□□□□ -2.64
COL1A1P02452 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.44□□□□□ -2.64
COL1A1P02452 RNU6-665P-201ENST00000384639 107 ntBASIC-1.44□□□□□ -2.64
COL1A1P02452 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.44□□□□□ -2.64
COL1A1P02452 MIR548H4-201ENST00000408689 111 ntBASIC-1.44□□□□□ -2.64
COL1A1P02452 RNA5SP449-201ENST00000516871 130 ntBASIC-1.44□□□□□ -2.64
COL1A1P02452 MIR5588-201ENST00000581890 63 ntBASIC-1.44□□□□□ -2.64
COL1A1P02452 MIR4503-201ENST00000582187 83 ntBASIC-1.44□□□□□ -2.64
COL1A1P02452 RNU6-379P-201ENST00000363813 104 ntBASIC-1.45□□□□□ -2.64
COL1A1P02452 RNU6-979P-201ENST00000383896 107 ntBASIC-1.45□□□□□ -2.64
COL1A1P02452 RNU6-844P-201ENST00000517175 102 ntBASIC-1.45□□□□□ -2.64
COL1A1P02452 MIR3938-201ENST00000582157 103 ntBASIC-1.45□□□□□ -2.64
COL1A1P02452 SNORD116-14-201ENST00000383894 92 ntBASIC-1.46□□□□□ -2.64
COL1A1P02452 SNORD116-17-201ENST00000383929 92 ntBASIC-1.46□□□□□ -2.64
COL1A1P02452 SNORD116-15-201ENST00000384445 92 ntBASIC-1.46□□□□□ -2.64
COL1A1P02452 SNORD116-19-201ENST00000384729 92 ntBASIC-1.46□□□□□ -2.64
COL1A1P02452 RNU6-987P-201ENST00000384759 104 ntBASIC-1.46□□□□□ -2.64
COL1A1P02452 IGLL4P-201ENST00000614590 133 ntBASIC-1.46□□□□□ -2.64
COL1A1P02452 MIR4317-201ENST00000637586 65 ntBASIC-1.46□□□□□ -2.64
COL1A1P02452 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.47□□□□□ -2.64
COL1A1P02452 RNU6-640P-201ENST00000363693 105 ntBASIC-1.47□□□□□ -2.64
COL1A1P02452 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.47□□□□□ -2.64
COL1A1P02452 RNU6-49P-201ENST00000384256 107 ntBASIC-1.47□□□□□ -2.64
COL1A1P02452 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.47□□□□□ -2.64
COL1A1P02452 SNORA40.13-201ENST00000516379 120 ntBASIC-1.47□□□□□ -2.64
COL1A1P02452 MIR548X-201ENST00000580069 75 ntBASIC-1.47□□□□□ -2.64
COL1A1P02452 MIR2052-201ENST00000636055 55 ntBASIC-1.47□□□□□ -2.64
COL1A1P02452 RNU6-886P-201ENST00000384319 105 ntBASIC-1.48□□□□□ -2.65
COL1A1P02452 RNU6-589P-201ENST00000516485 107 ntBASIC-1.48□□□□□ -2.65
COL1A1P02452 AC044792.1-201ENST00000593294 196 ntBASIC-1.48□□□□□ -2.65
COL1A1P02452 AL353621.2-201ENST00000605340 133 ntBASIC-1.48□□□□□ -2.65
COL1A1P02452 MIR1245B-201ENST00000636115 69 ntBASIC-1.48□□□□□ -2.65
COL1A1P02452 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.49□□□□□ -2.65
COL1A1P02452 RNU6-738P-201ENST00000384531 106 ntBASIC-1.49□□□□□ -2.65
COL1A1P02452 RNU6-422P-201ENST00000384632 107 ntBASIC-1.49□□□□□ -2.65
COL1A1P02452 SNORD30.1-201ENST00000391309 70 ntBASIC-1.49□□□□□ -2.65
COL1A1P02452 AL031737.1-201ENST00000450125 223 ntBASIC-1.49□□□□□ -2.65
COL1A1P02452 AL365222.1-201ENST00000614661 98 ntBASIC-1.49□□□□□ -2.65
COL1A1P02452 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.5□□□□□ -2.65
COL1A1P02452 RNU6-787P-201ENST00000384032 107 ntBASIC-1.5□□□□□ -2.65
COL1A1P02452 RNU6-446P-201ENST00000362827 106 ntBASIC-1.5□□□□□ -2.65
COL1A1P02452 RNU6-940P-201ENST00000363433 104 ntBASIC-1.5□□□□□ -2.65
COL1A1P02452 RNU6-776P-201ENST00000364403 104 ntBASIC-1.5□□□□□ -2.65
COL1A1P02452 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.5□□□□□ -2.65
COL1A1P02452 RNU6-634P-201ENST00000459134 106 ntBASIC-1.5□□□□□ -2.65
COL1A1P02452 MIR494-201ENST00000349529 81 ntBASIC-1.51□□□□□ -2.65
COL1A1P02452 SNORD113-4-201ENST00000364802 75 ntBASIC-1.51□□□□□ -2.65
COL1A1P02452 MIR1302-3-201ENST00000408128 138 ntBASIC-1.51□□□□□ -2.65
COL1A1P02452 RNU7-171P-201ENST00000459581 62 ntBASIC-1.51□□□□□ -2.65
COL1A1P02452 SNORA25.4-201ENST00000363666 124 ntBASIC-1.52□□□□□ -2.65
COL1A1P02452 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.52□□□□□ -2.65
COL1A1P02452 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.52□□□□□ -2.65
COL1A1P02452 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.52□□□□□ -2.65
COL1A1P02452 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.52□□□□□ -2.65
COL1A1P02452 MIR4511-201ENST00000582784 87 ntBASIC-1.52□□□□□ -2.65
COL1A1P02452 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.53□□□□□ -2.65
COL1A1P02452 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.53□□□□□ -2.65
COL1A1P02452 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.53□□□□□ -2.65
COL1A1P02452 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.53□□□□□ -2.65
COL1A1P02452 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.53□□□□□ -2.65
COL1A1P02452 AL117351.2-201ENST00000513571 157 ntBASIC-1.54□□□□□ -2.66
COL1A1P02452 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.55□□□□□ -2.66
COL1A1P02452 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.55□□□□□ -2.66
COL1A1P02452 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.56□□□□□ -2.66
COL1A1P02452 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.56□□□□□ -2.66
COL1A1P02452 RNY4P13-201ENST00000384284 96 ntBASIC-1.56□□□□□ -2.66
COL1A1P02452 U7.4-201ENST00000614961 63 ntBASIC-1.56□□□□□ -2.66
COL1A1P02452 U6.111-201ENST00000636093 83 ntBASIC-1.56□□□□□ -2.66
COL1A1P02452 RNU6-327P-201ENST00000516270 127 ntBASIC-1.56□□□□□ -2.66
COL1A1P02452 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.56□□□□□ -2.66
COL1A1P02452 MIR548AL-201ENST00000578416 97 ntBASIC-1.56□□□□□ -2.66
COL1A1P02452 RNU6-986P-201ENST00000363133 102 ntBASIC-1.57□□□□□ -2.66
COL1A1P02452 RNU4-33P-201ENST00000364316 85 ntBASIC-1.57□□□□□ -2.66
COL1A1P02452 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.57□□□□□ -2.66
COL1A1P02452 RNU6-959P-201ENST00000384671 107 ntBASIC-1.57□□□□□ -2.66
COL1A1P02452 AC110620.1-201ENST00000416042 228 ntBASIC-1.57□□□□□ -2.66
COL1A1P02452 RNU6-147P-201ENST00000383983 107 ntBASIC-1.58□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms