Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.91□□□□□ -2.72
NKX2-2O95096 MIR466-201ENST00000580653 84 ntBASIC-1.91□□□□□ -2.72
NKX2-2O95096 RNU6-520P-201ENST00000384717 104 ntBASIC-1.92□□□□□ -2.72
NKX2-2O95096 AC114801.3-201ENST00000510231 177 ntBASIC-1.92□□□□□ -2.72
NKX2-2O95096 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.94□□□□□ -2.72
NKX2-2O95096 RNU6-471P-201ENST00000383944 106 ntBASIC-1.94□□□□□ -2.72
NKX2-2O95096 RNU6-980P-201ENST00000516925 103 ntBASIC-1.94□□□□□ -2.72
NKX2-2O95096 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.94□□□□□ -2.72
NKX2-2O95096 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.95□□□□□ -2.72
NKX2-2O95096 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.96□□□□□ -2.72
NKX2-2O95096 RNU4-88P-201ENST00000411220 86 ntBASIC-1.96□□□□□ -2.72
NKX2-2O95096 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.97□□□□□ -2.72
NKX2-2O95096 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.98□□□□□ -2.73
NKX2-2O95096 RNY3P8-201ENST00000411366 126 ntBASIC-1.98□□□□□ -2.73
NKX2-2O95096 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.99□□□□□ -2.73
NKX2-2O95096 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.99□□□□□ -2.73
NKX2-2O95096 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.99□□□□□ -2.73
NKX2-2O95096 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.99□□□□□ -2.73
NKX2-2O95096 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.99□□□□□ -2.73
NKX2-2O95096 RNA5SP405-201ENST00000363059 114 ntBASIC-2□□□□□ -2.73
NKX2-2O95096 U4.2-201ENST00000618561 85 ntBASIC-2□□□□□ -2.73
NKX2-2O95096 AC013734.1-201ENST00000619329 111 ntBASIC-2□□□□□ -2.73
NKX2-2O95096 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.01□□□□□ -2.73
NKX2-2O95096 AL627230.5-201ENST00000619807 58 ntBASIC-2.01□□□□□ -2.73
NKX2-2O95096 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.02□□□□□ -2.73
NKX2-2O95096 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.03□□□□□ -2.73
NKX2-2O95096 SNORD45.2-201ENST00000363552 72 ntBASIC-2.04□□□□□ -2.74
NKX2-2O95096 RNY4P27-201ENST00000363341 96 ntBASIC-2.05□□□□□ -2.74
NKX2-2O95096 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.05□□□□□ -2.74
NKX2-2O95096 AL451105.1-201ENST00000450005 189 ntBASIC-2.05□□□□□ -2.74
NKX2-2O95096 RNU6-638P-201ENST00000516582 104 ntBASIC-2.06□□□□□ -2.74
NKX2-2O95096 MIR548W-201ENST00000581970 74 ntBASIC-2.06□□□□□ -2.74
NKX2-2O95096 RNU6-194P-201ENST00000363862 105 ntBASIC-2.07□□□□□ -2.74
NKX2-2O95096 SNORD114-3-201ENST00000364969 75 ntBASIC-2.07□□□□□ -2.74
NKX2-2O95096 RNU6-118P-201ENST00000516552 102 ntBASIC-2.08□□□□□ -2.74
NKX2-2O95096 MIR3139-201ENST00000579145 76 ntBASIC-2.08□□□□□ -2.74
NKX2-2O95096 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.08□□□□□ -2.74
NKX2-2O95096 SNORD60-201ENST00000383903 83 ntBASIC-2.09□□□□□ -2.74
NKX2-2O95096 RNU6-361P-201ENST00000364454 107 ntBASIC-2.1□□□□□ -2.75
NKX2-2O95096 snoU13.10-201ENST00000459301 103 ntBASIC-2.1□□□□□ -2.75
NKX2-2O95096 RNU6-419P-201ENST00000517030 63 ntBASIC-2.1□□□□□ -2.75
NKX2-2O95096 U6.97-201ENST00000636904 101 ntBASIC-2.11□□□□□ -2.75
NKX2-2O95096 MIR202-201ENST00000362219 110 ntBASIC-2.12□□□□□ -2.75
NKX2-2O95096 SNORD18C-201ENST00000362704 69 ntBASIC-2.13□□□□□ -2.75
NKX2-2O95096 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.13□□□□□ -2.75
NKX2-2O95096 RNU6-530P-201ENST00000391180 107 ntBASIC-2.13□□□□□ -2.75
NKX2-2O95096 MIR4748-201ENST00000578076 82 ntBASIC-2.13□□□□□ -2.75
NKX2-2O95096 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.13□□□□□ -2.75
NKX2-2O95096 SNORA17.4-201ENST00000391287 132 ntBASIC-2.14□□□□□ -2.75
NKX2-2O95096 MIR548N-201ENST00000408742 75 ntBASIC-2.14□□□□□ -2.75
NKX2-2O95096 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.16□□□□□ -2.76
NKX2-2O95096 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.17□□□□□ -2.76
NKX2-2O95096 MT-TM-201ENST00000387377 68 ntBASIC-2.18□□□□□ -2.76
NKX2-2O95096 RNU6-590P-201ENST00000365039 107 ntBASIC-2.19□□□□□ -2.76
NKX2-2O95096 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.2□□□□□ -2.76
NKX2-2O95096 MIR496-201ENST00000385226 102 ntBASIC-2.21□□□□□ -2.76
NKX2-2O95096 FTX_4.1-201ENST00000616291 147 ntBASIC-2.21□□□□□ -2.76
NKX2-2O95096 MIR4426-201ENST00000640330 63 ntBASIC-2.21□□□□□ -2.76
NKX2-2O95096 MIR581-201ENST00000384895 96 ntBASIC-2.22□□□□□ -2.76
NKX2-2O95096 RNU6-446P-201ENST00000362827 106 ntBASIC-2.23□□□□□ -2.77
NKX2-2O95096 RNU6-119P-201ENST00000364882 107 ntBASIC-2.23□□□□□ -2.77
NKX2-2O95096 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.23□□□□□ -2.77
NKX2-2O95096 MIR548X-201ENST00000580069 75 ntBASIC-2.23□□□□□ -2.77
NKX2-2O95096 AC097484.2-201ENST00000509147 251 ntBASIC-2.24□□□□□ -2.77
NKX2-2O95096 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.26□□□□□ -2.77
NKX2-2O95096 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.28□□□□□ -2.77
NKX2-2O95096 RNU6-176P-201ENST00000517196 105 ntBASIC-2.28□□□□□ -2.77
NKX2-2O95096 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.29□□□□□ -2.78
NKX2-2O95096 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.29□□□□□ -2.78
NKX2-2O95096 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.29□□□□□ -2.78
NKX2-2O95096 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.29□□□□□ -2.78
NKX2-2O95096 AC125388.1-201ENST00000459631 156 ntBASIC-2.29□□□□□ -2.78
NKX2-2O95096 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.29□□□□□ -2.78
NKX2-2O95096 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.29□□□□□ -2.78
NKX2-2O95096 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.29□□□□□ -2.78
NKX2-2O95096 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.29□□□□□ -2.78
NKX2-2O95096 MIR1207-201ENST00000408249 87 ntBASIC-2.3□□□□□ -2.78
NKX2-2O95096 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.3□□□□□ -2.78
NKX2-2O95096 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.31□□□□□ -2.78
NKX2-2O95096 RNU6-300P-201ENST00000459080 104 ntBASIC-2.31□□□□□ -2.78
NKX2-2O95096 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.32□□□□□ -2.78
NKX2-2O95096 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-2.34□□□□□ -2.78
NKX2-2O95096 MIR379-201ENST00000362218 67 ntBASIC-2.35□□□□□ -2.79
NKX2-2O95096 RNU6-141P-201ENST00000410499 105 ntBASIC-2.35□□□□□ -2.79
NKX2-2O95096 RNY4P9-201ENST00000363194 97 ntBASIC-2.36□□□□□ -2.79
NKX2-2O95096 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.36□□□□□ -2.79
NKX2-2O95096 SNORD113-3-201ENST00000364830 72 ntBASIC-2.36□□□□□ -2.79
NKX2-2O95096 RNU6-742P-201ENST00000365289 107 ntBASIC-2.36□□□□□ -2.79
NKX2-2O95096 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.37□□□□□ -2.79
NKX2-2O95096 RNU6-829P-201ENST00000363700 112 ntBASIC-2.37□□□□□ -2.79
NKX2-2O95096 MIR633-201ENST00000384821 98 ntBASIC-2.37□□□□□ -2.79
NKX2-2O95096 SNORD54-201ENST00000459159 67 ntBASIC-2.38□□□□□ -2.79
NKX2-2O95096 SNORD113-4-201ENST00000364802 75 ntBASIC-2.39□□□□□ -2.79
NKX2-2O95096 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.4□□□□□ -2.79
NKX2-2O95096 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.4□□□□□ -2.79
NKX2-2O95096 MIR4723-201ENST00000585070 81 ntBASIC-2.4□□□□□ -2.79
NKX2-2O95096 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.4□□□□□ -2.79
NKX2-2O95096 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.42□□□□□ -2.8
NKX2-2O95096 RNU6-68P-201ENST00000516576 104 ntBASIC-2.42□□□□□ -2.8
NKX2-2O95096 AC139453.2-201ENST00000487255 133 ntBASIC-2.43□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 269.1 ms