Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.81□□□□□ -2.7
RTCAO00442 RNU6-471P-201ENST00000383944 106 ntBASIC-1.81□□□□□ -2.7
RTCAO00442 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.81□□□□□ -2.7
RTCAO00442 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.82□□□□□ -2.7
RTCAO00442 MIR496-201ENST00000385226 102 ntBASIC-1.82□□□□□ -2.7
RTCAO00442 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.82□□□□□ -2.7
RTCAO00442 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.82□□□□□ -2.7
RTCAO00442 MIR466-201ENST00000580653 84 ntBASIC-1.82□□□□□ -2.7
RTCAO00442 MIR4723-201ENST00000585070 81 ntBASIC-1.82□□□□□ -2.7
RTCAO00442 AC108019.1-201ENST00000512540 175 ntBASIC-1.83□□□□□ -2.7
RTCAO00442 RNU6-118P-201ENST00000516552 102 ntBASIC-1.83□□□□□ -2.7
RTCAO00442 RNY3P8-201ENST00000411366 126 ntBASIC-1.84□□□□□ -2.7
RTCAO00442 AC114801.3-201ENST00000510231 177 ntBASIC-1.84□□□□□ -2.7
RTCAO00442 MIR4756-201ENST00000577874 78 ntBASIC-1.84□□□□□ -2.7
RTCAO00442 AC013734.1-201ENST00000619329 111 ntBASIC-1.84□□□□□ -2.7
RTCAO00442 SNORD45.2-201ENST00000363552 72 ntBASIC-1.85□□□□□ -2.71
RTCAO00442 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.85□□□□□ -2.71
RTCAO00442 RNU6-361P-201ENST00000364454 107 ntBASIC-1.87□□□□□ -2.71
RTCAO00442 AL451105.1-201ENST00000450005 189 ntBASIC-1.87□□□□□ -2.71
RTCAO00442 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.88□□□□□ -2.71
RTCAO00442 MIR664B-201ENST00000626756 61 ntBASIC-1.88□□□□□ -2.71
RTCAO00442 SNORD18C-201ENST00000362704 69 ntBASIC-1.89□□□□□ -2.71
RTCAO00442 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.89□□□□□ -2.71
RTCAO00442 RNU6-119P-201ENST00000364882 107 ntBASIC-1.89□□□□□ -2.71
RTCAO00442 RNU6-841P-201ENST00000383872 107 ntBASIC-1.89□□□□□ -2.71
RTCAO00442 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.89□□□□□ -2.71
RTCAO00442 MIR3123-201ENST00000583417 75 ntBASIC-1.89□□□□□ -2.71
RTCAO00442 SNORD60-201ENST00000383903 83 ntBASIC-1.9□□□□□ -2.71
RTCAO00442 MIR548N-201ENST00000408742 75 ntBASIC-1.9□□□□□ -2.71
RTCAO00442 SNORA72.7-201ENST00000516349 94 ntBASIC-1.9□□□□□ -2.71
RTCAO00442 RNU6-980P-201ENST00000516925 103 ntBASIC-1.9□□□□□ -2.71
RTCAO00442 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.91□□□□□ -2.72
RTCAO00442 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.91□□□□□ -2.72
RTCAO00442 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.92□□□□□ -2.72
RTCAO00442 RNU6-419P-201ENST00000517030 63 ntBASIC-1.92□□□□□ -2.72
RTCAO00442 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.92□□□□□ -2.72
RTCAO00442 SNORA17.4-201ENST00000391287 132 ntBASIC-1.94□□□□□ -2.72
RTCAO00442 MIR3139-201ENST00000579145 76 ntBASIC-1.94□□□□□ -2.72
RTCAO00442 MIR202-201ENST00000362219 110 ntBASIC-1.97□□□□□ -2.72
RTCAO00442 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.97□□□□□ -2.72
RTCAO00442 U6.97-201ENST00000636904 101 ntBASIC-1.97□□□□□ -2.72
RTCAO00442 RNU6-530P-201ENST00000391180 107 ntBASIC-1.98□□□□□ -2.73
RTCAO00442 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.99□□□□□ -2.73
RTCAO00442 MIR548AM-201ENST00000584298 74 ntBASIC-1.99□□□□□ -2.73
RTCAO00442 Y_RNA.284-201ENST00000364806 102 ntBASIC-2□□□□□ -2.73
RTCAO00442 MIR581-201ENST00000384895 96 ntBASIC-2□□□□□ -2.73
RTCAO00442 RNA5SP405-201ENST00000363059 114 ntBASIC-2.02□□□□□ -2.73
RTCAO00442 RNU6-638P-201ENST00000516582 104 ntBASIC-2.02□□□□□ -2.73
RTCAO00442 RNU6-176P-201ENST00000517196 105 ntBASIC-2.02□□□□□ -2.73
RTCAO00442 MT-TM-201ENST00000387377 68 ntBASIC-2.03□□□□□ -2.73
RTCAO00442 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.03□□□□□ -2.73
RTCAO00442 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.04□□□□□ -2.74
RTCAO00442 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.04□□□□□ -2.74
RTCAO00442 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.04□□□□□ -2.74
RTCAO00442 SNORD54-201ENST00000459159 67 ntBASIC-2.05□□□□□ -2.74
RTCAO00442 MIR548X-201ENST00000580069 75 ntBASIC-2.05□□□□□ -2.74
RTCAO00442 MIR4426-201ENST00000640330 63 ntBASIC-2.05□□□□□ -2.74
RTCAO00442 RNA5SP93-201ENST00000362525 114 ntBASIC-2.06□□□□□ -2.74
RTCAO00442 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.06□□□□□ -2.74
RTCAO00442 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.06□□□□□ -2.74
RTCAO00442 RNU6-590P-201ENST00000365039 107 ntBASIC-2.07□□□□□ -2.74
RTCAO00442 MIR379-201ENST00000362218 67 ntBASIC-2.09□□□□□ -2.74
RTCAO00442 RNU6-446P-201ENST00000362827 106 ntBASIC-2.09□□□□□ -2.74
RTCAO00442 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.1□□□□□ -2.75
RTCAO00442 RNU6-194P-201ENST00000363862 105 ntBASIC-2.11□□□□□ -2.75
RTCAO00442 RNU6-300P-201ENST00000459080 104 ntBASIC-2.11□□□□□ -2.75
RTCAO00442 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.13□□□□□ -2.75
RTCAO00442 MIR548W-201ENST00000581970 74 ntBASIC-2.13□□□□□ -2.75
RTCAO00442 RNU4-88P-201ENST00000411220 86 ntBASIC-2.14□□□□□ -2.75
RTCAO00442 snoU13.10-201ENST00000459301 103 ntBASIC-2.15□□□□□ -2.75
RTCAO00442 RNU6-68P-201ENST00000516576 104 ntBASIC-2.15□□□□□ -2.75
RTCAO00442 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.16□□□□□ -2.76
RTCAO00442 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.16□□□□□ -2.76
RTCAO00442 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.16□□□□□ -2.76
RTCAO00442 RNU6-742P-201ENST00000365289 107 ntBASIC-2.17□□□□□ -2.76
RTCAO00442 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.17□□□□□ -2.76
RTCAO00442 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.19□□□□□ -2.76
RTCAO00442 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.19□□□□□ -2.76
RTCAO00442 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.19□□□□□ -2.76
RTCAO00442 AC125388.1-201ENST00000459631 156 ntBASIC-2.19□□□□□ -2.76
RTCAO00442 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.21□□□□□ -2.76
RTCAO00442 RNU6-829P-201ENST00000363700 112 ntBASIC-2.21□□□□□ -2.76
RTCAO00442 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.21□□□□□ -2.76
RTCAO00442 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.23□□□□□ -2.77
RTCAO00442 RNY4P7-201ENST00000364600 96 ntBASIC-2.23□□□□□ -2.77
RTCAO00442 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-2.23□□□□□ -2.77
RTCAO00442 SNORD113-4-201ENST00000364802 75 ntBASIC-2.24□□□□□ -2.77
RTCAO00442 AC139453.2-201ENST00000487255 133 ntBASIC-2.25□□□□□ -2.77
RTCAO00442 AC097484.2-201ENST00000509147 251 ntBASIC-2.25□□□□□ -2.77
RTCAO00442 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.26□□□□□ -2.77
RTCAO00442 MIR633-201ENST00000384821 98 ntBASIC-2.27□□□□□ -2.77
RTCAO00442 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.28□□□□□ -2.77
RTCAO00442 RNU4-33P-201ENST00000364316 85 ntBASIC-2.29□□□□□ -2.78
RTCAO00442 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.29□□□□□ -2.78
RTCAO00442 AC079150.2-201ENST00000443733 78 ntBASIC-2.3□□□□□ -2.78
RTCAO00442 RNU6-912P-201ENST00000363800 104 ntBASIC-2.32□□□□□ -2.78
RTCAO00442 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.32□□□□□ -2.78
RTCAO00442 FTX_4.1-201ENST00000616291 147 ntBASIC-2.33□□□□□ -2.78
RTCAO00442 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.34□□□□□ -2.78
RTCAO00442 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.34□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms