Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.5□□□□□ -2.81
TRAV39A0A0B4J263 RNU6-530P-201ENST00000391180 107 ntBASIC-2.5□□□□□ -2.81
TRAV39A0A0B4J263 MIR664B-201ENST00000626756 61 ntBASIC-2.5□□□□□ -2.81
TRAV39A0A0B4J263 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.51□□□□□ -2.81
TRAV39A0A0B4J263 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.51□□□□□ -2.81
TRAV39A0A0B4J263 RNU7-119P-201ENST00000459279 63 ntBASIC-2.51□□□□□ -2.81
TRAV39A0A0B4J263 SNORA40.16-201ENST00000517238 121 ntBASIC-2.51□□□□□ -2.81
TRAV39A0A0B4J263 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.51□□□□□ -2.81
TRAV39A0A0B4J263 U2.22-201ENST00000636441 106 ntBASIC-2.51□□□□□ -2.81
TRAV39A0A0B4J263 MIR548N-201ENST00000408742 75 ntBASIC-2.52□□□□□ -2.81
TRAV39A0A0B4J263 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.52□□□□□ -2.81
TRAV39A0A0B4J263 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.53□□□□□ -2.81
TRAV39A0A0B4J263 RNU6-871P-201ENST00000516122 100 ntBASIC-2.54□□□□□ -2.82
TRAV39A0A0B4J263 MIR3139-201ENST00000579145 76 ntBASIC-2.54□□□□□ -2.82
TRAV39A0A0B4J263 SNORD45.2-201ENST00000363552 72 ntBASIC-2.55□□□□□ -2.82
TRAV39A0A0B4J263 RNU6-361P-201ENST00000364454 107 ntBASIC-2.55□□□□□ -2.82
TRAV39A0A0B4J263 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.55□□□□□ -2.82
TRAV39A0A0B4J263 MIR3202-2-201ENST00000635980 79 ntBASIC-2.57□□□□□ -2.82
TRAV39A0A0B4J263 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 RNU6-940P-201ENST00000363433 104 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 AL451105.1-201ENST00000450005 189 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 MIR4511-201ENST00000582784 87 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 U6.111-201ENST00000636093 83 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 MIR4426-201ENST00000640330 63 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 MT-TM-201ENST00000387377 68 ntBASIC-2.61□□□□□ -2.83
TRAV39A0A0B4J263 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.61□□□□□ -2.83
TRAV39A0A0B4J263 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.62□□□□□ -2.83
TRAV39A0A0B4J263 RNU6-857P-201ENST00000515893 110 ntBASIC-2.62□□□□□ -2.83
TRAV39A0A0B4J263 RNU6-194P-201ENST00000363862 105 ntBASIC-2.63□□□□□ -2.83
TRAV39A0A0B4J263 RNU6-573P-201ENST00000383938 106 ntBASIC-2.63□□□□□ -2.83
TRAV39A0A0B4J263 MIR1255A-201ENST00000408338 113 ntBASIC-2.63□□□□□ -2.83
TRAV39A0A0B4J263 AC103706.3-201ENST00000636297 85 ntBASIC-2.63□□□□□ -2.83
TRAV39A0A0B4J263 SNORD73B-201ENST00000364394 72 ntBASIC-2.64□□□□□ -2.83
TRAV39A0A0B4J263 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.64□□□□□ -2.83
TRAV39A0A0B4J263 AC097484.2-201ENST00000509147 251 ntBASIC-2.64□□□□□ -2.83
TRAV39A0A0B4J263 RNU6-539P-201ENST00000516665 103 ntBASIC-2.65□□□□□ -2.83
TRAV39A0A0B4J263 MIR466-201ENST00000580653 84 ntBASIC-2.65□□□□□ -2.83
TRAV39A0A0B4J263 MIR3938-201ENST00000582157 103 ntBASIC-2.65□□□□□ -2.83
TRAV39A0A0B4J263 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.66□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-300P-201ENST00000459080 104 ntBASIC-2.66□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.67□□□□□ -2.84
TRAV39A0A0B4J263 MIR4679-1-201ENST00000637619 75 ntBASIC-2.68□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 MIR379-201ENST00000362218 67 ntBASIC-2.7□□□□□ -2.84
TRAV39A0A0B4J263 RNA5SP405-201ENST00000363059 114 ntBASIC-2.7□□□□□ -2.84
TRAV39A0A0B4J263 SNORA26.2-201ENST00000390922 122 ntBASIC-2.7□□□□□ -2.84
TRAV39A0A0B4J263 RNA5SP170-201ENST00000517150 101 ntBASIC-2.7□□□□□ -2.84
TRAV39A0A0B4J263 FTX_4.1-201ENST00000616291 147 ntBASIC-2.7□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-590P-201ENST00000365039 107 ntBASIC-2.71□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.71□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-279P-201ENST00000391297 101 ntBASIC-2.71□□□□□ -2.84
TRAV39A0A0B4J263 RNY4-201ENST00000516507 96 ntBASIC-2.71□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-912P-201ENST00000363800 104 ntBASIC-2.72□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-800P-201ENST00000384473 103 ntBASIC-2.72□□□□□ -2.84
TRAV39A0A0B4J263 RNY4P29-201ENST00000410801 97 ntBASIC-2.72□□□□□ -2.84
TRAV39A0A0B4J263 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.72□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-176P-201ENST00000517196 105 ntBASIC-2.73□□□□□ -2.85
TRAV39A0A0B4J263 RNU6-419P-201ENST00000517030 63 ntBASIC-2.74□□□□□ -2.85
TRAV39A0A0B4J263 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.74□□□□□ -2.85
TRAV39A0A0B4J263 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.75□□□□□ -2.85
TRAV39A0A0B4J263 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.75□□□□□ -2.85
TRAV39A0A0B4J263 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.75□□□□□ -2.85
TRAV39A0A0B4J263 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.76□□□□□ -2.85
TRAV39A0A0B4J263 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.77□□□□□ -2.85
TRAV39A0A0B4J263 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.78□□□□□ -2.85
TRAV39A0A0B4J263 SNORD113-3-201ENST00000364830 72 ntBASIC-2.78□□□□□ -2.85
TRAV39A0A0B4J263 RNA5SP225-201ENST00000410874 135 ntBASIC-2.78□□□□□ -2.85
TRAV39A0A0B4J263 RNU6-68P-201ENST00000516576 104 ntBASIC-2.78□□□□□ -2.85
TRAV39A0A0B4J263 MIR4748-201ENST00000578076 82 ntBASIC-2.78□□□□□ -2.85
TRAV39A0A0B4J263 RNU6-742P-201ENST00000365289 107 ntBASIC-2.79□□□□□ -2.86
TRAV39A0A0B4J263 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.79□□□□□ -2.86
TRAV39A0A0B4J263 SNORD78.1-201ENST00000390866 65 ntBASIC-2.81□□□□□ -2.86
TRAV39A0A0B4J263 AC110620.1-201ENST00000416042 228 ntBASIC-2.81□□□□□ -2.86
TRAV39A0A0B4J263 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.82□□□□□ -2.86
TRAV39A0A0B4J263 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-2.83□□□□□ -2.86
TRAV39A0A0B4J263 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.86□□□□□ -2.87
TRAV39A0A0B4J263 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.86□□□□□ -2.87
TRAV39A0A0B4J263 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.88□□□□□ -2.87
TRAV39A0A0B4J263 RNY4P9-201ENST00000363194 97 ntBASIC-2.88□□□□□ -2.87
TRAV39A0A0B4J263 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.88□□□□□ -2.87
TRAV39A0A0B4J263 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.89□□□□□ -2.87
TRAV39A0A0B4J263 RNU6-776P-201ENST00000364403 104 ntBASIC-2.89□□□□□ -2.87
TRAV39A0A0B4J263 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.89□□□□□ -2.87
TRAV39A0A0B4J263 MIR1254-1-201ENST00000408257 97 ntBASIC-2.89□□□□□ -2.87
TRAV39A0A0B4J263 MIR4662A-201ENST00000637499 67 ntBASIC-2.89□□□□□ -2.87
TRAV39A0A0B4J263 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.9□□□□□ -2.87
TRAV39A0A0B4J263 MIR548X-201ENST00000580069 75 ntBASIC-2.91□□□□□ -2.88
TRAV39A0A0B4J263 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.93□□□□□ -2.88
TRAV39A0A0B4J263 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.93□□□□□ -2.88
TRAV39A0A0B4J263 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.94□□□□□ -2.88
TRAV39A0A0B4J263 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.95□□□□□ -2.88
TRAV39A0A0B4J263 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.96□□□□□ -2.88
TRAV39A0A0B4J263 RNU6-141P-201ENST00000410499 105 ntBASIC-2.96□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms