Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC005520.4-201ENST00000604337 90 ntBASIC-0.99□□□□□ -2.57
CDK11AQ9UQ88 MIR4662A-201ENST00000637499 67 ntBASIC-0.99□□□□□ -2.57
CDK11AQ9UQ88 RNU6-1111P-201ENST00000391118 107 ntBASIC-1□□□□□ -2.57
CDK11AQ9UQ88 SNORD63.2-201ENST00000516303 64 ntBASIC-1□□□□□ -2.57
CDK11AQ9UQ88 MIR4520-1-201ENST00000582609 70 ntBASIC-1□□□□□ -2.57
CDK11AQ9UQ88 AC018880.2-201ENST00000414265 201 ntBASIC-1.01□□□□□ -2.57
CDK11AQ9UQ88 AC120024.2-201ENST00000576526 175 ntBASIC-1.01□□□□□ -2.57
CDK11AQ9UQ88 RNU6-247P-201ENST00000362636 107 ntBASIC-1.02□□□□□ -2.57
CDK11AQ9UQ88 RNA5SP192-201ENST00000364404 120 ntBASIC-1.02□□□□□ -2.57
CDK11AQ9UQ88 AC013734.1-201ENST00000619329 111 ntBASIC-1.02□□□□□ -2.57
CDK11AQ9UQ88 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.03□□□□□ -2.57
CDK11AQ9UQ88 RNU6-810P-201ENST00000364001 107 ntBASIC-1.03□□□□□ -2.57
CDK11AQ9UQ88 MIR6738-201ENST00000619620 64 ntBASIC-1.03□□□□□ -2.57
CDK11AQ9UQ88 RNY3P8-201ENST00000411366 126 ntBASIC-1.04□□□□□ -2.58
CDK11AQ9UQ88 RNU6-231P-201ENST00000517122 103 ntBASIC-1.04□□□□□ -2.58
CDK11AQ9UQ88 MIR3115-201ENST00000577915 68 ntBASIC-1.04□□□□□ -2.58
CDK11AQ9UQ88 SNORD30.1-201ENST00000391309 70 ntBASIC-1.05□□□□□ -2.58
CDK11AQ9UQ88 SNORA25.5-201ENST00000363782 126 ntBASIC-1.06□□□□□ -2.58
CDK11AQ9UQ88 RNU6-995P-201ENST00000391244 107 ntBASIC-1.06□□□□□ -2.58
CDK11AQ9UQ88 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.06□□□□□ -2.58
CDK11AQ9UQ88 RNU6-706P-201ENST00000517229 104 ntBASIC-1.06□□□□□ -2.58
CDK11AQ9UQ88 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.07□□□□□ -2.58
CDK11AQ9UQ88 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.07□□□□□ -2.58
CDK11AQ9UQ88 MIR487B-201ENST00000385021 84 ntBASIC-1.07□□□□□ -2.58
CDK11AQ9UQ88 SNORD116.2-201ENST00000391251 93 ntBASIC-1.07□□□□□ -2.58
CDK11AQ9UQ88 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.07□□□□□ -2.58
CDK11AQ9UQ88 U6.111-201ENST00000636093 83 ntBASIC-1.07□□□□□ -2.58
CDK11AQ9UQ88 SNORA25.4-201ENST00000363666 124 ntBASIC-1.08□□□□□ -2.58
CDK11AQ9UQ88 RNU6-226P-201ENST00000363778 107 ntBASIC-1.08□□□□□ -2.58
CDK11AQ9UQ88 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.08□□□□□ -2.58
CDK11AQ9UQ88 SNORA40.16-201ENST00000517238 121 ntBASIC-1.08□□□□□ -2.58
CDK11AQ9UQ88 MIR5591-201ENST00000578248 65 ntBASIC-1.08□□□□□ -2.58
CDK11AQ9UQ88 SNORA27.2-201ENST00000363365 126 ntBASIC-1.09□□□□□ -2.58
CDK11AQ9UQ88 RNU6-122P-201ENST00000516818 107 ntBASIC-1.09□□□□□ -2.58
CDK11AQ9UQ88 MIR7110-201ENST00000612638 86 ntBASIC-1.09□□□□□ -2.58
CDK11AQ9UQ88 RNU6-776P-201ENST00000364403 104 ntBASIC-1.1□□□□□ -2.59
CDK11AQ9UQ88 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.1□□□□□ -2.59
CDK11AQ9UQ88 RNU6-649P-201ENST00000384463 107 ntBASIC-1.1□□□□□ -2.59
CDK11AQ9UQ88 RNA5SP86-201ENST00000390869 98 ntBASIC-1.1□□□□□ -2.59
CDK11AQ9UQ88 HLA-S-202ENST00000425174 53 ntBASIC-1.1□□□□□ -2.59
CDK11AQ9UQ88 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.1□□□□□ -2.59
CDK11AQ9UQ88 MIR4511-201ENST00000582784 87 ntBASIC-1.1□□□□□ -2.59
CDK11AQ9UQ88 AC138207.3-201ENST00000585289 166 ntBASIC-1.1□□□□□ -2.59
CDK11AQ9UQ88 U6.97-201ENST00000636904 101 ntBASIC-1.1□□□□□ -2.59
CDK11AQ9UQ88 RNU6-400P-201ENST00000391173 106 ntBASIC-1.11□□□□□ -2.59
CDK11AQ9UQ88 RNU6-10P-201ENST00000384036 107 ntBASIC-1.12□□□□□ -2.59
CDK11AQ9UQ88 MIR581-201ENST00000384895 96 ntBASIC-1.12□□□□□ -2.59
CDK11AQ9UQ88 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.12□□□□□ -2.59
CDK11AQ9UQ88 MIR1468-201ENST00000410600 86 ntBASIC-1.12□□□□□ -2.59
CDK11AQ9UQ88 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.13□□□□□ -2.59
CDK11AQ9UQ88 SNORA40B-201ENST00000385573 128 ntBASIC-1.13□□□□□ -2.59
CDK11AQ9UQ88 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.14□□□□□ -2.59
CDK11AQ9UQ88 RNU6-800P-201ENST00000384473 103 ntBASIC-1.14□□□□□ -2.59
CDK11AQ9UQ88 RNU6-695P-201ENST00000391157 104 ntBASIC-1.14□□□□□ -2.59
CDK11AQ9UQ88 RNU7-160P-201ENST00000516660 62 ntBASIC-1.14□□□□□ -2.59
CDK11AQ9UQ88 MIR23C-201ENST00000579846 100 ntBASIC-1.14□□□□□ -2.59
CDK11AQ9UQ88 MIR409-201ENST00000362237 79 ntBASIC-1.15□□□□□ -2.59
CDK11AQ9UQ88 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.15□□□□□ -2.59
CDK11AQ9UQ88 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
CDK11AQ9UQ88 MIR4770-201ENST00000579149 58 ntBASIC-1.15□□□□□ -2.59
CDK11AQ9UQ88 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.16□□□□□ -2.6
CDK11AQ9UQ88 RNU6-520P-201ENST00000384717 104 ntBASIC-1.16□□□□□ -2.6
CDK11AQ9UQ88 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.16□□□□□ -2.6
CDK11AQ9UQ88 RNU6-539P-201ENST00000516665 103 ntBASIC-1.16□□□□□ -2.6
CDK11AQ9UQ88 MIR3165-201ENST00000579874 75 ntBASIC-1.16□□□□□ -2.6
CDK11AQ9UQ88 MIR3123-201ENST00000583417 75 ntBASIC-1.16□□□□□ -2.6
CDK11AQ9UQ88 RNU6-828P-201ENST00000364876 107 ntBASIC-1.17□□□□□ -2.6
CDK11AQ9UQ88 MIR548H1-201ENST00000408610 102 ntBASIC-1.17□□□□□ -2.6
CDK11AQ9UQ88 MIR466-201ENST00000580653 84 ntBASIC-1.17□□□□□ -2.6
CDK11AQ9UQ88 MIR202-201ENST00000362219 110 ntBASIC-1.18□□□□□ -2.6
CDK11AQ9UQ88 AC110620.1-201ENST00000416042 228 ntBASIC-1.19□□□□□ -2.6
CDK11AQ9UQ88 MIR3938-201ENST00000582157 103 ntBASIC-1.19□□□□□ -2.6
CDK11AQ9UQ88 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.19□□□□□ -2.6
CDK11AQ9UQ88 AC103706.3-201ENST00000636297 85 ntBASIC-1.19□□□□□ -2.6
CDK11AQ9UQ88 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.2□□□□□ -2.6
CDK11AQ9UQ88 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.21□□□□□ -2.6
CDK11AQ9UQ88 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.21□□□□□ -2.6
CDK11AQ9UQ88 MIR587-201ENST00000384845 96 ntBASIC-1.21□□□□□ -2.6
CDK11AQ9UQ88 RNU6-530P-201ENST00000391180 107 ntBASIC-1.21□□□□□ -2.6
CDK11AQ9UQ88 RNU6-446P-201ENST00000362827 106 ntBASIC-1.22□□□□□ -2.6
CDK11AQ9UQ88 RNU6-940P-201ENST00000363433 104 ntBASIC-1.22□□□□□ -2.6
CDK11AQ9UQ88 RNA5SP266-201ENST00000410273 108 ntBASIC-1.23□□□□□ -2.61
CDK11AQ9UQ88 MIR548W-201ENST00000581970 74 ntBASIC-1.23□□□□□ -2.61
CDK11AQ9UQ88 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.24□□□□□ -2.61
CDK11AQ9UQ88 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.24□□□□□ -2.61
CDK11AQ9UQ88 MIR548N-201ENST00000408742 75 ntBASIC-1.24□□□□□ -2.61
CDK11AQ9UQ88 snoU13.10-201ENST00000459301 103 ntBASIC-1.24□□□□□ -2.61
CDK11AQ9UQ88 RNA5SP331-201ENST00000364986 107 ntBASIC-1.25□□□□□ -2.61
CDK11AQ9UQ88 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.25□□□□□ -2.61
CDK11AQ9UQ88 AL451105.1-201ENST00000450005 189 ntBASIC-1.25□□□□□ -2.61
CDK11AQ9UQ88 RNU7-119P-201ENST00000459279 63 ntBASIC-1.25□□□□□ -2.61
CDK11AQ9UQ88 RNU6-68P-201ENST00000516576 104 ntBASIC-1.25□□□□□ -2.61
CDK11AQ9UQ88 MIR4756-201ENST00000577874 78 ntBASIC-1.25□□□□□ -2.61
CDK11AQ9UQ88 MIR548AM-201ENST00000584298 74 ntBASIC-1.25□□□□□ -2.61
CDK11AQ9UQ88 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.25□□□□□ -2.61
CDK11AQ9UQ88 RNU6-361P-201ENST00000364454 107 ntBASIC-1.26□□□□□ -2.61
CDK11AQ9UQ88 RNU6-742P-201ENST00000365289 107 ntBASIC-1.26□□□□□ -2.61
CDK11AQ9UQ88 RNU6-841P-201ENST00000383872 107 ntBASIC-1.26□□□□□ -2.61
CDK11AQ9UQ88 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.26□□□□□ -2.61
CDK11AQ9UQ88 SNORA17.4-201ENST00000391287 132 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms