Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.56□□□□□ -2.98
CHD7Q9P2D1 AF246928.1-201ENST00000623768 87 ntBASIC-3.56□□□□□ -2.98
CHD7Q9P2D1 RNU6-219P-201ENST00000364728 107 ntBASIC-3.57□□□□□ -2.98
CHD7Q9P2D1 SNORA26.8-201ENST00000391306 124 ntBASIC-3.57□□□□□ -2.98
CHD7Q9P2D1 MIR590-201ENST00000385008 97 ntBASIC-3.57□□□□□ -2.98
CHD7Q9P2D1 RNU6-780P-201ENST00000391030 104 ntBASIC-3.57□□□□□ -2.98
CHD7Q9P2D1 RNU6-485P-201ENST00000363475 107 ntBASIC-3.57□□□□□ -2.98
CHD7Q9P2D1 Y_RNA.635-201ENST00000459041 101 ntBASIC-3.58□□□□□ -2.98
CHD7Q9P2D1 RNU6-81P-201ENST00000365608 104 ntBASIC-3.6□□□□□ -2.99
CHD7Q9P2D1 MTND4P17-201ENST00000470444 350 ntBASIC-3.6□□□□□ -2.99
CHD7Q9P2D1 MIR3134-201ENST00000579433 74 ntBASIC-3.6□□□□□ -2.99
CHD7Q9P2D1 SNORD33.1-201ENST00000516213 88 ntBASIC-3.6□□□□□ -2.99
CHD7Q9P2D1 MIR548BB-201ENST00000626714 66 ntBASIC-3.6□□□□□ -2.99
CHD7Q9P2D1 AL157777.2-201ENST00000258070 137 ntBASIC-3.61□□□□□ -2.99
CHD7Q9P2D1 Y_RNA.276-201ENST00000364732 109 ntBASIC-3.61□□□□□ -2.99
CHD7Q9P2D1 SNORD111B-201ENST00000408587 80 ntBASIC-3.61□□□□□ -2.99
CHD7Q9P2D1 MIR3915-201ENST00000578518 97 ntBASIC-3.61□□□□□ -2.99
CHD7Q9P2D1 AC113139.1-201ENST00000605049 239 ntBASIC-3.61□□□□□ -2.99
CHD7Q9P2D1 RNU6-823P-201ENST00000391042 103 ntBASIC-3.61□□□□□ -2.99
CHD7Q9P2D1 AC114801.3-201ENST00000510231 177 ntBASIC-3.61□□□□□ -2.99
CHD7Q9P2D1 RNU6-483P-201ENST00000384088 108 ntBASIC-3.62□□□□□ -2.99
CHD7Q9P2D1 RN7SKP298-201ENST00000515950 94 ntBASIC-3.62□□□□□ -2.99
CHD7Q9P2D1 RNU7-30P-201ENST00000516835 62 ntBASIC-3.62□□□□□ -2.99
CHD7Q9P2D1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.62□□□□□ -2.99
CHD7Q9P2D1 MIR1302-11-201ENST00000408051 138 ntBASIC-3.63□□□□□ -2.99
CHD7Q9P2D1 MIR1302-9-201ENST00000408365 138 ntBASIC-3.63□□□□□ -2.99
CHD7Q9P2D1 MIR1302-10-201ENST00000408734 138 ntBASIC-3.63□□□□□ -2.99
CHD7Q9P2D1 MIR4643-201ENST00000577473 78 ntBASIC-3.63□□□□□ -2.99
CHD7Q9P2D1 MIR1302-2-201ENST00000607096 138 ntBASIC-3.63□□□□□ -2.99
CHD7Q9P2D1 MTND4LP32-201ENST00000636111 270 ntBASIC-3.63□□□□□ -2.99
CHD7Q9P2D1 RNU7-107P-201ENST00000459121 61 ntBASIC-3.63□□□□□ -2.99
CHD7Q9P2D1 MIR1252-201ENST00000408861 65 ntBASIC-3.64□□□□□ -2.99
CHD7Q9P2D1 Y_RNA.693-201ENST00000516641 110 ntBASIC-3.64□□□□□ -2.99
CHD7Q9P2D1 SNORA81.3-201ENST00000517283 198 ntBASIC-3.64□□□□□ -2.99
CHD7Q9P2D1 Y_RNA.252-201ENST00000364556 101 ntBASIC-3.64□□□□□ -2.99
CHD7Q9P2D1 RNU6-109P-201ENST00000516364 107 ntBASIC-3.64□□□□□ -2.99
CHD7Q9P2D1 RNU6-184P-201ENST00000516514 107 ntBASIC-3.64□□□□□ -2.99
CHD7Q9P2D1 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.65□□□□□ -2.99
CHD7Q9P2D1 Y_RNA.516-201ENST00000384541 124 ntBASIC-3.66□□□□□ -2.99
CHD7Q9P2D1 SNORD113-4-201ENST00000364802 75 ntBASIC-3.66□□□□□ -3
CHD7Q9P2D1 RNU6-675P-201ENST00000384236 104 ntBASIC-3.66□□□□□ -3
CHD7Q9P2D1 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-3.66□□□□□ -3
CHD7Q9P2D1 Y_RNA.277-201ENST00000364754 102 ntBASIC-3.67□□□□□ -3
CHD7Q9P2D1 AC044792.1-201ENST00000593294 196 ntBASIC-3.67□□□□□ -3
CHD7Q9P2D1 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.67□□□□□ -3
CHD7Q9P2D1 SNORD116-29-201ENST00000384516 83 ntBASIC-3.67□□□□□ -3
CHD7Q9P2D1 Y_RNA.645-201ENST00000391229 102 ntBASIC-3.68□□□□□ -3
CHD7Q9P2D1 Y_RNA.89-201ENST00000363031 102 ntBASIC-3.68□□□□□ -3
CHD7Q9P2D1 MIR1302-5-201ENST00000408164 150 ntBASIC-3.68□□□□□ -3
CHD7Q9P2D1 RNU4-71P-201ENST00000516258 113 ntBASIC-3.68□□□□□ -3
CHD7Q9P2D1 RNU6-446P-201ENST00000362827 106 ntBASIC-3.69□□□□□ -3
CHD7Q9P2D1 RNU6-829P-201ENST00000363700 112 ntBASIC-3.69□□□□□ -3
CHD7Q9P2D1 Y_RNA.58-201ENST00000362807 102 ntBASIC-3.7□□□□□ -3
CHD7Q9P2D1 SNORD116-4-201ENST00000384733 96 ntBASIC-3.7□□□□□ -3
CHD7Q9P2D1 RNU4-14P-201ENST00000410858 122 ntBASIC-3.7□□□□□ -3
CHD7Q9P2D1 SNORD113-6-201ENST00000363345 75 ntBASIC-3.7□□□□□ -3
CHD7Q9P2D1 Y_RNA.259-201ENST00000364619 101 ntBASIC-3.7□□□□□ -3
CHD7Q9P2D1 RNU7-152P-201ENST00000458982 64 ntBASIC-3.7□□□□□ -3
CHD7Q9P2D1 RNU6-539P-201ENST00000516665 103 ntBASIC-3.7□□□□□ -3
CHD7Q9P2D1 RNU6-232P-201ENST00000517144 64 ntBASIC-3.71□□□□□ -3
CHD7Q9P2D1 RNU6-844P-201ENST00000517175 102 ntBASIC-3.71□□□□□ -3
CHD7Q9P2D1 Y_RNA.626-201ENST00000411288 95 ntBASIC-3.72□□□□□ -3
CHD7Q9P2D1 SNORA40.13-201ENST00000516379 120 ntBASIC-3.72□□□□□ -3
CHD7Q9P2D1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-3.72□□□□□ -3
CHD7Q9P2D1 U6.95-201ENST00000636931 70 ntBASIC-3.72□□□□□ -3
CHD7Q9P2D1 SNORD116-21-201ENST00000384507 92 ntBASIC-3.72□□□□□ -3.01
CHD7Q9P2D1 Y_RNA.26-201ENST00000362539 101 ntBASIC-3.73□□□□□ -3.01
CHD7Q9P2D1 SNORD30.1-201ENST00000391309 70 ntBASIC-3.73□□□□□ -3.01
CHD7Q9P2D1 RNU7-171P-201ENST00000459581 62 ntBASIC-3.73□□□□□ -3.01
CHD7Q9P2D1 Y_RNA.579-201ENST00000390939 94 ntBASIC-3.73□□□□□ -3.01
CHD7Q9P2D1 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.74□□□□□ -3.01
CHD7Q9P2D1 U7.4-201ENST00000614961 63 ntBASIC-3.74□□□□□ -3.01
CHD7Q9P2D1 RNU6-871P-201ENST00000516122 100 ntBASIC-3.75□□□□□ -3.01
CHD7Q9P2D1 RNU7-125P-201ENST00000458760 62 ntBASIC-3.75□□□□□ -3.01
CHD7Q9P2D1 RNU6-1135P-201ENST00000411083 103 ntBASIC-3.76□□□□□ -3.01
CHD7Q9P2D1 AC109635.3-201ENST00000529536 185 ntBASIC-3.77□□□□□ -3.01
CHD7Q9P2D1 Y_RNA.210-201ENST00000364161 110 ntBASIC-3.77□□□□□ -3.01
CHD7Q9P2D1 MIR4509-3-201ENST00000578671 94 ntBASIC-3.77□□□□□ -3.01
CHD7Q9P2D1 MIR4509-2-201ENST00000583920 94 ntBASIC-3.77□□□□□ -3.01
CHD7Q9P2D1 MIR4509-1-201ENST00000618224 94 ntBASIC-3.77□□□□□ -3.01
CHD7Q9P2D1 MIR3914-2-201ENST00000637339 95 ntBASIC-3.77□□□□□ -3.01
CHD7Q9P2D1 MT-TL1-201ENST00000386347 75 ntBASIC-3.78□□□□□ -3.01
CHD7Q9P2D1 MIR4712-201ENST00000583750 82 ntBASIC-3.78□□□□□ -3.01
CHD7Q9P2D1 RNU6-753P-201ENST00000363926 107 ntBASIC-3.78□□□□□ -3.01
CHD7Q9P2D1 DLEU2_1.1-201ENST00000612089 120 ntBASIC-3.78□□□□□ -3.01
CHD7Q9P2D1 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.79□□□□□ -3.02
CHD7Q9P2D1 RNU6-133P-201ENST00000383989 107 ntBASIC-3.79□□□□□ -3.02
CHD7Q9P2D1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-3.8□□□□□ -3.02
CHD7Q9P2D1 AC113195.1-201ENST00000579952 141 ntBASIC-3.81□□□□□ -3.02
CHD7Q9P2D1 U6.103-201ENST00000637085 61 ntBASIC-3.81□□□□□ -3.02
CHD7Q9P2D1 Y_RNA.573-201ENST00000384763 105 ntBASIC-3.81□□□□□ -3.02
CHD7Q9P2D1 RNU6-426P-201ENST00000516464 97 ntBASIC-3.81□□□□□ -3.02
CHD7Q9P2D1 MIR3611-201ENST00000584484 83 ntBASIC-3.81□□□□□ -3.02
CHD7Q9P2D1 MALAT1.1-201ENST00000618249 95 ntBASIC-3.81□□□□□ -3.02
CHD7Q9P2D1 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.81□□□□□ -3.02
CHD7Q9P2D1 RNU6-463P-201ENST00000384340 107 ntBASIC-3.82□□□□□ -3.02
CHD7Q9P2D1 MIR548F3-201ENST00000408509 87 ntBASIC-3.82□□□□□ -3.02
CHD7Q9P2D1 RNU6-277P-201ENST00000516272 106 ntBASIC-3.82□□□□□ -3.02
CHD7Q9P2D1 AC004792.1-201ENST00000614523 137 ntBASIC-3.82□□□□□ -3.02
CHD7Q9P2D1 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.83□□□□□ -3.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms